RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 HLA-DOAP06340 250 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 VIL1P09327 827 aaKnown RBP11.38□□□□□ -0.59
RAB5B-206ENST00000549505 GNA11P29992 359 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 MCTP2Q6DN12 878 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 RRP36Q96EU6 259 aaKnown RBP11.38□□□□□ -0.59
RAB5B-206ENST00000549505 ADAMTS3O15072 1205 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 MYL5Q02045 173 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 PTGDRQ13258 359 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 EZH2Q15910 746 aaKnown RBP11.38□□□□□ -0.59
RAB5B-206ENST00000549505 GLT8D2Q9H1C3 349 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 PI4KBQ9UBF8 816 aa11.38□□□□□ -0.59
RAB5B-206ENST00000549505 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 AKR1B1P15121 316 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 GSDMDP57764 484 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 SOGA3Q5TF21 947 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 BTNL9Q6UXG8 535 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 SH3BP5LQ7L8J4 393 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 PAGE5Q96GU1 130 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 GMCL1Q96IK5 515 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 SERTAD1Q9UHV2 236 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 TBC1D12O60347 775 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 PNOCQ13519 176 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 OLFM4Q6UX06 510 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 AOPEPQ8N6M6 819 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 SYMPKQ92797 1274 aaKnown RBP11.37□□□□□ -0.59
RAB5B-206ENST00000549505 MBOAT7Q96N66 472 aa11.37□□□□□ -0.59
RAB5B-206ENST00000549505 POLR2DO15514 142 aaKnown RBP11.36□□□□□ -0.59
RAB5B-206ENST00000549505 TPM4P67936 248 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 CUL4BQ13620 913 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 NOM1Q5C9Z4 860 aaKnown RBP11.36□□□□□ -0.59
RAB5B-206ENST00000549505 FOXR2Q6PJQ5 311 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 CCDC82Q8N4S0 544 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 C6orf50Q9HD87 102 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 RIC8AQ9NPQ8 531 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 PNMA6FA0A0J9YX94 578 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 EDIL3O43854 480 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 PLA2G6O60733 806 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 SMC2O95347 1197 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 KCNB1Q14721 858 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 DOK7Q18PE1 504 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 MTMR9Q96QG7 549 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 PGAP2Q9UHJ9 254 aa11.36□□□□□ -0.59
RAB5B-206ENST00000549505 ATF5Q9Y2D1 282 aaPredicted RBP11.36□□□□□ -0.59
RAB5B-206ENST00000549505 YDJCA8MPS7 323 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 PPP4R3AQ6IN85 833 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 MOXD1Q6UVY6 613 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 PIK3AP1Q6ZUJ8 805 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 CCDC125Q86Z20 511 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 SIAH1Q8IUQ4 282 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 IQUBQ8NA54 791 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 NAP1L4Q99733 375 aaKnown RBP11.35□□□□□ -0.59
RAB5B-206ENST00000549505 TRIM5Q9C035 493 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 KANSL2Q9H9L4 492 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 BECN2A8MW95 431 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
RAB5B-206ENST00000549505 CCDC93Q567U6 631 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 SMARCE1Q969G3 411 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 CLIP2Q9UDT6 1046 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 HERC5Q9UII4 1024 aaKnown RBP11.35□□□□□ -0.59
RAB5B-206ENST00000549505 FXR2P51116 673 aaKnown RBP eCLIP11.35□□□□□ -0.59
RAB5B-206ENST00000549505 TGFB2P61812 414 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 NOLC1Q14978 699 aaKnown RBP eCLIP11.35□□□□□ -0.59
RAB5B-206ENST00000549505 TMEM179Q6ZVK1 233 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 USP49Q70CQ1 688 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 IGSF22Q8N9C0 903 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 CRYGNQ8WXF5 182 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 TMX1Q9H3N1 280 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 KBTBD4Q9NVX7 518 aa11.35□□□□□ -0.59
RAB5B-206ENST00000549505 CYP3A7-CYP3A51PA0A087WV96 503 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 CBFA2T2O43439 604 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 CYP3A7P24462 503 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 TBX2Q13207 712 aaPredicted RBP11.34□□□□□ -0.59
RAB5B-206ENST00000549505 NONOQ15233 471 aaKnown RBP eCLIP11.34□□□□□ -0.59
RAB5B-206ENST00000549505 ZNF174Q15697 407 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 CDKAL1Q5VV42 579 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 RSBN1LQ6PCB5 846 aaPredicted RBP11.34□□□□□ -0.59
RAB5B-206ENST00000549505 LRRC8AQ8IWT6 810 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 ZNF622Q969S3 477 aaKnown RBP eCLIP11.34□□□□□ -0.59
RAB5B-206ENST00000549505 MED15Q96RN5 788 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 JMJD4Q9H9V9 463 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 STX8Q9UNK0 236 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 LTBP3Q9NS15 1303 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 LRRC10BA6NIK2 292 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 PTMAP06454 111 aaKnown RBP11.34□□□□□ -0.59
RAB5B-206ENST00000549505 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 NFIAQ12857 509 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 PDIA5Q14554 519 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 CCDC144BQ3MJ40 725 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 AGBL3Q8NEM8 1001 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 EPSTI1Q96J88 318 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 DEFB129Q9H1M3 183 aa11.34□□□□□ -0.59
RAB5B-206ENST00000549505 CCDC194A0A1B0GVG4 234 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 hCG_1642624A0A1W2PR95 340 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 GTF2F1P35269 517 aaKnown RBP eCLIP11.33□□□□□ -0.6
RAB5B-206ENST00000549505 USP17L2Q6R6M4 530 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 APTXQ7Z2E3 356 aaKnown RBP11.33□□□□□ -0.6
RAB5B-206ENST00000549505 TTLL6Q8N841 843 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 CCDC150Q8NCX0 1101 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 GPKOWQ92917 476 aaPredicted RBP eCLIP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms