RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 VCPKMTQ9H867 229 aa13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 FBXO28Q9NVF7 368 aa13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 CXXC1Q9P0U4 656 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 ELP1O95163 1332 aa13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 ROBO3Q96MS0 1386 aa13.08□□□□□ -0.31
TRAFD1-206ENST00000549358 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 CHD9Q3L8U1 2897 aa13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 VWA5AO00534 786 aa13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 SNAI1O95863 264 aaPredicted RBP13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 FGBP02675 491 aa13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 ASGR1P07306 291 aa13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 C6orf222P0C671 652 aaPredicted RBP13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 TRIM27P14373 513 aa13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 ATP8B2P98198 1209 aa13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 ICA1Q05084 483 aa13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 SSH3Q8TE77 659 aa13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 SDR42E1Q8WUS8 393 aa13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 DYNLL2Q96FJ2 89 aa13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 CRNKL1Q9BZJ0 848 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 ZHX1Q9UKY1 873 aaPredicted RBP13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 YBX2Q9Y2T7 364 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-206ENST00000549358 ARVCFO00192 962 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 IPO8O15397 1037 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 RAD21O60216 631 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 DUSP11O75319 330 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 AKR1B1P15121 316 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 CYP2C18P33260 490 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 KCNQ1P51787 676 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 SLC9C2Q5TAH2 1124 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 TMED8Q6PL24 325 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 OTOP2Q7RTS6 562 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 FAM126BQ8IXS8 530 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 MSL3Q8N5Y2 521 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 PCSK9Q8NBP7 692 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 HERVK_113Q902F9 699 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 FRAT1Q92837 279 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 IL23AQ9NPF7 189 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 SWAP70Q9UH65 585 aa13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 ZNF214Q9UL59 606 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-206ENST00000549358 PLXNA1Q9UIW2 1896 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 REV3LO60673 3130 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 TLR3O15455 904 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 EEF2P13639 858 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 RABGGTBP53611 331 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 SKIV2LQ15477 1246 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 AAK1Q2M2I8 961 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 GNASQ5JWF2 1037 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 DDX11Q96FC9 970 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 MTIF3Q9H2K0 278 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 EPHX3Q9H6B9 360 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 SPC25Q9HBM1 224 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 DCP1AQ9NPI6 582 aaPredicted RBP13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 PPP1R9AQ9ULJ8 1098 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 SYNGAP1Q96PV0 1343 aa13.06□□□□□ -0.32
TRAFD1-206ENST00000549358 A0A0U1RQG5 324 aaPredicted RBP13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 ADCY6O43306 1168 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 MYOGP15173 224 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 PDE6AP16499 860 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 CST5P28325 142 aaPredicted RBP13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 COPB2P35606 906 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 CCDC144BQ3MJ40 725 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 MAMDC4Q6UXC1 1216 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 REPS2Q8NFH8 660 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 LRFN3Q9BTN0 628 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 C1orf115Q9H7X2 142 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 NOP58Q9Y2X3 529 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 HCN4Q9Y3Q4 1203 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 RIPK3Q9Y572 518 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 SMCHD1A6NHR9 2005 aa13.05□□□□□ -0.32
TRAFD1-206ENST00000549358 SMIM22K7EJ46 135 aa13.04□□□□□ -0.32
TRAFD1-206ENST00000549358 CD4P01730 458 aa13.04□□□□□ -0.32
TRAFD1-206ENST00000549358 GJA9P57773 515 aa13.04□□□□□ -0.32
TRAFD1-206ENST00000549358 FAM83BQ5T0W9 1011 aa13.04□□□□□ -0.32
TRAFD1-206ENST00000549358 PPP2R2DQ66LE6 453 aa13.04□□□□□ -0.32
TRAFD1-206ENST00000549358 LCORLQ8N3X6 602 aa13.04□□□□□ -0.32
TRAFD1-206ENST00000549358 CCDC17Q96LX7 622 aa13.04□□□□□ -0.32
TRAFD1-206ENST00000549358 HIPK3Q9H422 1215 aa13.04□□□□□ -0.32
TRAFD1-206ENST00000549358 ARIH1Q9Y4X5 557 aaPredicted RBP13.04□□□□□ -0.32
TRAFD1-206ENST00000549358 ZNF532Q9HCE3 1301 aa13.04□□□□□ -0.32
TRAFD1-206ENST00000549358 DNAJC25-GNG10A0A024R161 153 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 CYP2D7A0A087X1C5 515 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 RFXAPO00287 272 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 PRKAB2O43741 272 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 CDK8P49336 464 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 CCL23P55773 120 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 TTF1Q15361 905 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 SNRNP48Q6IEG0 339 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 TMEM57Q8N5G2 664 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 TEX13BQ9BXU2 312 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 UPF3AQ9H1J1 476 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 ARMT1Q9H993 441 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 GOPCQ9HD26 462 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 SLC4A7Q9Y6M7 1214 aa13.03□□□□□ -0.32
TRAFD1-206ENST00000549358 UMODL1Q5DID0 1318 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms