RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-205ENST00000549034 MORF4L1Q9UBU8 362 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 DOCK3Q8IZD9 2030 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 PCNTO95613 3336 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 CCDC69A6NI79 296 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 VWA5AO00534 786 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 CPA1P15085 419 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 CTGFP29279 349 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 STAT2P52630 851 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 CCNA1P78396 465 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 FGD1P98174 961 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 C8orf34Q49A92 452 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 WDR78Q5VTH9 848 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 BLOC1S2Q6QNY1 142 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 RASGRP2Q7LDG7 609 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 CTU1Q7Z7A3 348 aaKnown RBP11.23□□□□□ -0.61
RAB5B-205ENST00000549034 CATIPQ7Z7H3 387 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 CPXCR1Q8N123 301 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 MB21D1Q8N884 522 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 NUP133Q8WUM0 1156 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 MTA3Q9BTC8 594 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 UBA5Q9GZZ9 404 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 VAT1LQ9HCJ6 419 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 ADAMTS5Q9UNA0 930 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 RLFQ13129 1914 aa11.23□□□□□ -0.61
RAB5B-205ENST00000549034 SH2B2O14492 632 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-205ENST00000549034 TNPO2O14787 897 aaKnown RBP11.22□□□□□ -0.61
RAB5B-205ENST00000549034 MGAMO43451 1857 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 PLA2G6O60733 806 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 PARP1P09874 1014 aaKnown RBP11.22□□□□□ -0.61
RAB5B-205ENST00000549034 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
RAB5B-205ENST00000549034 STAT3P40763 770 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 SNAP25P60880 206 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 CAP1Q01518 475 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 ZNF543Q08ER8 600 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 TMEM132BQ14DG7 1078 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 SYNE3Q6ZMZ3 975 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 OTOP1Q7RTM1 612 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 NCAPG2Q86XI2 1143 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 COA7Q96BR5 231 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 TRIM47Q96LD4 638 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 LY9Q9HBG7 655 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 RAVER2Q9HCJ3 691 aaKnown RBP11.22□□□□□ -0.61
RAB5B-205ENST00000549034 PRR12Q9ULL5 1215 aa11.22□□□□□ -0.61
RAB5B-205ENST00000549034 GNRH1P01148 92 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 SNHG28P0DPA3 235 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 FDX1P10109 184 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 MAPK4P31152 587 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 LIFRP42702 1097 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 PKN2Q16513 984 aaKnown RBP11.21□□□□□ -0.61
RAB5B-205ENST00000549034 GPATCH4Q5T3I0 446 aaKnown RBP11.21□□□□□ -0.61
RAB5B-205ENST00000549034 SYDE2Q5VT97 1194 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 CCDC174Q6PII3 467 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 BTNL9Q6UXG8 535 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 Q6ZUG5 572 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 PLEKHH3Q7Z736 793 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 MOV10L1Q9BXT6 1211 aaKnown RBP11.21□□□□□ -0.61
RAB5B-205ENST00000549034 SPATC1LQ9H0A9 340 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 PORCNQ9H237 461 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 NAP1L2Q9ULW6 460 aaPredicted RBP11.21□□□□□ -0.61
RAB5B-205ENST00000549034 SLC12A7Q9Y666 1083 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 CYP46A1Q9Y6A2 500 aa11.21□□□□□ -0.61
RAB5B-205ENST00000549034 COL11A1P12107 1806 aaPredicted RBP11.21□□□□□ -0.62
RAB5B-205ENST00000549034 WDR19Q8NEZ3 1342 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 ZNFX1Q9P2E3 1918 aaKnown RBP11.2□□□□□ -0.62
RAB5B-205ENST00000549034 KLRF2D3W0D1 207 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 DHX16O60231 1041 aaKnown RBP11.2□□□□□ -0.62
RAB5B-205ENST00000549034 SLC25A27O95847 323 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 ERCC3P19447 782 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 RPS6KB1P23443 525 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 ASPRV1Q53RT3 343 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 RUFY3Q7L099 469 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 GPR142Q7Z601 462 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 ZNF654Q8IZM8 581 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 STAG2Q8N3U4 1231 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 MYL10Q9BUA6 226 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 MCOLN1Q9GZU1 580 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 CPVLQ9H3G5 476 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 SLC38A10Q9HBR0 1119 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 ZSWIM6Q9HCJ5 1215 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 SRRDQ9UH36 339 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 GABRQQ9UN88 632 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 PTPN22Q9Y2R2 807 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 PARP14Q460N5 1801 aa11.2□□□□□ -0.62
RAB5B-205ENST00000549034 PALM3A6NDB9 673 aaPredicted RBP11.19□□□□□ -0.62
RAB5B-205ENST00000549034 CALM1P0DP23 149 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 CALM2P0DP24 149 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 CALM3P0DP25 149 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 RXRAP19793 462 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 PRMT2P55345 433 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 TROAPQ12815 778 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 GRM4Q14833 912 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 SNRNP48Q6IEG0 339 aaKnown RBP11.19□□□□□ -0.62
RAB5B-205ENST00000549034 RAB11FIP4Q86YS3 637 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 RIOX2Q8IUF8 465 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 CCDC144CPQ8IYA2 1237 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 ADGRF4Q8IZF3 695 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 REPS2Q8NFH8 660 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms