RNA–Protein interactions for RNA: ENST00000548364.5

C12orf54-203, Transcript of chromosome 12 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf54, Length 685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-203ENST00000548364 TRDNQ13061 729 aa13.58□□□□□ -0.24
C12orf54-203ENST00000548364 KCTD2Q14681 263 aa13.58□□□□□ -0.24
C12orf54-203ENST00000548364 OLFML2BQ68BL8 750 aa13.58□□□□□ -0.24
C12orf54-203ENST00000548364 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
C12orf54-203ENST00000548364 DPP9Q86TI2 863 aa13.58□□□□□ -0.24
C12orf54-203ENST00000548364 ANKLE1Q8NAG6 615 aa13.58□□□□□ -0.24
C12orf54-203ENST00000548364 U2AF1L4Q8WU68 220 aaKnown RBP13.58□□□□□ -0.24
C12orf54-203ENST00000548364 TRIB2Q92519 343 aa13.58□□□□□ -0.24
C12orf54-203ENST00000548364 ZNF214Q9UL59 606 aaPredicted RBP13.58□□□□□ -0.24
C12orf54-203ENST00000548364 U3KPZ7 1027 aaPredicted RBP13.58□□□□□ -0.24
C12orf54-203ENST00000548364 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
C12orf54-203ENST00000548364 CHMLP26374 656 aa13.57□□□□□ -0.24
C12orf54-203ENST00000548364 ADORA2AP29274 412 aa13.57□□□□□ -0.24
C12orf54-203ENST00000548364 TMEM132BQ14DG7 1078 aa13.57□□□□□ -0.24
C12orf54-203ENST00000548364 MTFR1Q15390 333 aa13.57□□□□□ -0.24
C12orf54-203ENST00000548364 BMP2KLQ5H9B9 411 aa13.57□□□□□ -0.24
C12orf54-203ENST00000548364 SNRNP48Q6IEG0 339 aaKnown RBP13.57□□□□□ -0.24
C12orf54-203ENST00000548364 TBC1D10CQ8IV04 446 aa13.57□□□□□ -0.24
C12orf54-203ENST00000548364 CCDC136Q96JN2 1154 aa13.57□□□□□ -0.24
C12orf54-203ENST00000548364 HTATIP2Q9BUP3 242 aa13.57□□□□□ -0.24
C12orf54-203ENST00000548364 UNC93B1Q9H1C4 597 aa13.57□□□□□ -0.24
C12orf54-203ENST00000548364 SLC38A10Q9HBR0 1119 aa13.57□□□□□ -0.24
C12orf54-203ENST00000548364 SGPL1O95470 568 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 MYCP01106 439 aaPredicted RBP13.56□□□□□ -0.24
C12orf54-203ENST00000548364 CCDC96Q2M329 555 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 TKFCQ3LXA3 575 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 GPATCH4Q5T3I0 446 aaKnown RBP13.56□□□□□ -0.24
C12orf54-203ENST00000548364 MAP3K21Q5TCX8 1036 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 KIAA1211Q6ZU35 1233 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.56□□□□□ -0.24
C12orf54-203ENST00000548364 DGKHQ86XP1 1220 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 CHST13Q8NET6 341 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 KIFC2Q96AC6 838 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 MMP19Q99542 508 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 NUP88Q99567 741 aaPredicted RBP13.56□□□□□ -0.24
C12orf54-203ENST00000548364 UBAC1Q9BSL1 405 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 FBXO28Q9NVF7 368 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 NRBP1Q9UHY1 535 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 DIS3Q9Y2L1 958 aaKnown RBP13.56□□□□□ -0.24
C12orf54-203ENST00000548364 NEDD4P46934 1319 aa13.56□□□□□ -0.24
C12orf54-203ENST00000548364 ZNFX1Q9P2E3 1918 aaKnown RBP13.56□□□□□ -0.24
C12orf54-203ENST00000548364 TMEM232C9JQI7 657 aa13.55□□□□□ -0.24
C12orf54-203ENST00000548364 SGSM2O43147 1006 aa13.55□□□□□ -0.24
C12orf54-203ENST00000548364 FARP2O94887 1054 aaPredicted RBP13.55□□□□□ -0.24
C12orf54-203ENST00000548364 EN2P19622 333 aaPredicted RBP13.55□□□□□ -0.24
C12orf54-203ENST00000548364 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
C12orf54-203ENST00000548364 PRPF38BQ5VTL8 546 aaKnown RBP13.55□□□□□ -0.24
C12orf54-203ENST00000548364 ERICH6BQ5W0A0 696 aa13.55□□□□□ -0.24
C12orf54-203ENST00000548364 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
C12orf54-203ENST00000548364 MSL3Q8N5Y2 521 aaKnown RBP13.55□□□□□ -0.24
C12orf54-203ENST00000548364 REPS2Q8NFH8 660 aa13.55□□□□□ -0.24
C12orf54-203ENST00000548364 IL17RBQ9NRM6 502 aa13.55□□□□□ -0.24
C12orf54-203ENST00000548364 ERICH2A1L162 156 aa13.54□□□□□ -0.24
C12orf54-203ENST00000548364 PEX10O60683 326 aa13.54□□□□□ -0.24
C12orf54-203ENST00000548364 SHISA4Q96DD7 197 aa13.54□□□□□ -0.24
C12orf54-203ENST00000548364 DEFB118Q96PH6 123 aa13.54□□□□□ -0.24
C12orf54-203ENST00000548364 NBPF3Q9H094 633 aa13.54□□□□□ -0.24
C12orf54-203ENST00000548364 CRISPLD2Q9H0B8 497 aa13.54□□□□□ -0.24
C12orf54-203ENST00000548364 KAT14Q9H8E8 782 aa13.54□□□□□ -0.24
C12orf54-203ENST00000548364 PFASO15067 1338 aa13.54□□□□□ -0.24
C12orf54-203ENST00000548364 TNRC18O15417 2968 aaPredicted RBP13.54□□□□□ -0.24
C12orf54-203ENST00000548364 NMT2O60551 498 aa13.53□□□□□ -0.24
C12orf54-203ENST00000548364 KDM4AO75164 1064 aa13.53□□□□□ -0.24
C12orf54-203ENST00000548364 MCCP23508 829 aa13.53□□□□□ -0.24
C12orf54-203ENST00000548364 TMEM47Q9BQJ4 181 aa13.53□□□□□ -0.24
C12orf54-203ENST00000548364 ACAD9Q9H845 621 aa13.53□□□□□ -0.24
C12orf54-203ENST00000548364 MYH6P13533 1939 aa13.52□□□□□ -0.24
C12orf54-203ENST00000548364 TFRCP02786 760 aaKnown RBP13.52□□□□□ -0.25
C12orf54-203ENST00000548364 PDHBP11177 359 aa13.52□□□□□ -0.25
C12orf54-203ENST00000548364 CACNB2Q08289 660 aaPredicted RBP13.52□□□□□ -0.25
C12orf54-203ENST00000548364 ASPRV1Q53RT3 343 aa13.52□□□□□ -0.25
C12orf54-203ENST00000548364 BTNL9Q6UXG8 535 aa13.52□□□□□ -0.25
C12orf54-203ENST00000548364 CPXCR1Q8N123 301 aa13.52□□□□□ -0.25
C12orf54-203ENST00000548364 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
C12orf54-203ENST00000548364 DDX11Q96FC9 970 aa13.52□□□□□ -0.25
C12orf54-203ENST00000548364 ZSCAN10Q96SZ4 725 aaPredicted RBP13.52□□□□□ -0.25
C12orf54-203ENST00000548364 TNKSO95271 1327 aa13.52□□□□□ -0.25
C12orf54-203ENST00000548364 SYNGAP1Q96PV0 1343 aa13.52□□□□□ -0.25
C12orf54-203ENST00000548364 WDR19Q8NEZ3 1342 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 B4E1Z4 1266 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 CYBAP13498 195 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 CCL14Q16627 93 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 IFIT1BQ5T764 474 aaKnown RBP13.51□□□□□ -0.25
C12orf54-203ENST00000548364 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 RNF20Q5VTR2 975 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 KCTD1Q719H9 257 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 NECAB2Q7Z6G3 386 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 ZNF467Q7Z7K2 595 aaPredicted RBP13.51□□□□□ -0.25
C12orf54-203ENST00000548364 ANKRD35Q8N283 1001 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 NCOA7Q8NI08 942 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 MAML3Q96JK9 1138 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 MTA3Q9BTC8 594 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 MAF1Q9H063 256 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 RANBP17Q9H2T7 1088 aaKnown RBP13.51□□□□□ -0.25
C12orf54-203ENST00000548364 OGDHLQ9ULD0 1010 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 CNPY2Q9Y2B0 182 aa13.51□□□□□ -0.25
C12orf54-203ENST00000548364 MKI67P46013 3256 aaKnown RBP13.51□□□□□ -0.25
C12orf54-203ENST00000548364 CDC45O75419 566 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms