RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.88■■□□□ 1.41
RITA1-201ENST00000548278 ATRNL1Q5VV63 1379 aa23.87■■□□□ 1.41
RITA1-201ENST00000548278 FAM196BA6NMK8 535 aa23.87■■□□□ 1.41
RITA1-201ENST00000548278 PPP4R3BQ5MIZ7 849 aa23.87■■□□□ 1.41
RITA1-201ENST00000548278 LARGE2Q8N3Y3 721 aa23.87■■□□□ 1.41
RITA1-201ENST00000548278 HOOK1Q9UJC3 728 aaKnown RBP23.87■■□□□ 1.41
RITA1-201ENST00000548278 ENTPD3O75355 529 aa23.87■■□□□ 1.41
RITA1-201ENST00000548278 VIL1P09327 827 aaKnown RBP23.87■■□□□ 1.41
RITA1-201ENST00000548278 POSTNQ15063 836 aa23.87■■□□□ 1.41
RITA1-201ENST00000548278 TATDN1Q6P1N9 297 aa23.87■■□□□ 1.41
RITA1-201ENST00000548278 PDILTQ8N807 584 aa23.87■■□□□ 1.41
RITA1-201ENST00000548278 A0A087X0B3 334 aa23.86■■□□□ 1.41
RITA1-201ENST00000548278 VWA3AA6NCI4 1184 aa23.86■■□□□ 1.41
RITA1-201ENST00000548278 IL17AQ16552 155 aa23.86■■□□□ 1.41
RITA1-201ENST00000548278 CERKLQ49MI3 558 aaPredicted RBP23.86■■□□□ 1.41
RITA1-201ENST00000548278 ISM2Q6H9L7 571 aa23.86■■□□□ 1.41
RITA1-201ENST00000548278 GMLQ99445 158 aa23.86■■□□□ 1.41
RITA1-201ENST00000548278 COL2A1P02458 1487 aaPredicted RBP23.85■■□□□ 1.41
RITA1-201ENST00000548278 SMCO2A6NFE2 343 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 PSMD14O00487 310 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 ARL6IP4Q66PJ3 421 aaKnown RBP23.85■■□□□ 1.41
RITA1-201ENST00000548278 KANK3Q6NY19 840 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.85■■□□□ 1.41
RITA1-201ENST00000548278 SPC24Q8NBT2 197 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 C6orf50Q9HD87 102 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 GPCPD1Q9NPB8 672 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 hCG_1984214I3L0E3 225 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 RAD17O75943 681 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 GNA11P29992 359 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 SHROOM1Q2M3G4 852 aaPredicted RBP23.85■■□□□ 1.41
RITA1-201ENST00000548278 NT5DC1Q5TFE4 455 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 ZNF713Q8N859 430 aaPredicted RBP23.85■■□□□ 1.41
RITA1-201ENST00000548278 VPS33BQ9H267 617 aa23.85■■□□□ 1.41
RITA1-201ENST00000548278 ESYT2A0FGR8 921 aa23.84■■□□□ 1.41
RITA1-201ENST00000548278 ZNF500O60304 480 aaPredicted RBP23.84■■□□□ 1.41
RITA1-201ENST00000548278 ATP2B2Q01814 1243 aa23.84■■□□□ 1.41
RITA1-201ENST00000548278 INF2Q27J81 1249 aa23.84■■□□□ 1.41
RITA1-201ENST00000548278 MKL1Q969V6 931 aa23.84■■□□□ 1.41
RITA1-201ENST00000548278 PRR29P0C7W0 189 aa23.83■■□□□ 1.41
RITA1-201ENST00000548278 ZNF830Q96NB3 372 aaPredicted RBP23.83■■□□□ 1.41
RITA1-201ENST00000548278 TRIM34Q9BYJ4 488 aa23.83■■□□□ 1.41
RITA1-201ENST00000548278 SARSP49591 514 aaKnown RBP23.83■■□□□ 1.41
RITA1-201ENST00000548278 NCAPHQ15003 741 aa23.83■■□□□ 1.41
RITA1-201ENST00000548278 GPATCH4Q5T3I0 446 aaKnown RBP23.83■■□□□ 1.41
RITA1-201ENST00000548278 SOGA3Q5TF21 947 aa23.83■■□□□ 1.41
RITA1-201ENST00000548278 TTBK2Q6IQ55 1244 aa23.83■■□□□ 1.41
RITA1-201ENST00000548278 KRT25Q7Z3Z0 450 aa23.83■■□□□ 1.41
RITA1-201ENST00000548278 DHX58Q96C10 678 aa23.83■■□□□ 1.41
RITA1-201ENST00000548278 KANSL2Q9H9L4 492 aa23.83■■□□□ 1.41
RITA1-201ENST00000548278 JMJD4Q9H9V9 463 aa23.83■■□□□ 1.41
RITA1-201ENST00000548278 NYAP2Q9P242 653 aa23.83■■□□□ 1.41
RITA1-201ENST00000548278 SPDYE2BA6NHP3 402 aa23.82■■□□□ 1.4
RITA1-201ENST00000548278 GOLGA6L6A8MZA4 724 aa23.82■■□□□ 1.4
RITA1-201ENST00000548278 SLFN14P0C7P3 912 aa23.82■■□□□ 1.4
RITA1-201ENST00000548278 SPDYE6P0CI01 402 aa23.82■■□□□ 1.4
RITA1-201ENST00000548278 CDC25BP30305 580 aa23.82■■□□□ 1.4
RITA1-201ENST00000548278 GRAMD1CQ8IYS0 662 aa23.82■■□□□ 1.4
RITA1-201ENST00000548278 TTC12Q9H892 705 aaPredicted RBP23.82■■□□□ 1.4
RITA1-201ENST00000548278 EEF2P13639 858 aaKnown RBP23.82■■□□□ 1.4
RITA1-201ENST00000548278 BMP6P22004 513 aa23.82■■□□□ 1.4
RITA1-201ENST00000548278 SH3RF1Q7Z6J0 888 aa23.82■■□□□ 1.4
RITA1-201ENST00000548278 ADGRF4Q8IZF3 695 aa23.82■■□□□ 1.4
RITA1-201ENST00000548278 MAN1B1Q9UKM7 699 aa23.82■■□□□ 1.4
RITA1-201ENST00000548278 ZBTB7AO95365 584 aa23.81■■□□□ 1.4
RITA1-201ENST00000548278 TGFB2P61812 414 aa23.81■■□□□ 1.4
RITA1-201ENST00000548278 SIAH1Q8IUQ4 282 aa23.81■■□□□ 1.4
RITA1-201ENST00000548278 SPATA20Q8TB22 786 aa23.81■■□□□ 1.4
RITA1-201ENST00000548278 MRFAP1L1Q96HT8 127 aa23.81■■□□□ 1.4
RITA1-201ENST00000548278 SMTNL1A8MU46 457 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 IKBKBO14920 756 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 TPM3P06753 285 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 CCDC96Q2M329 555 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 TMEM179Q6ZVK1 233 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 PIM2Q9P1W9 311 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 ZNRF3Q9ULT6 936 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 PNMA6FA0A0J9YX94 578 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 LONP1P36776 959 aaKnown RBP23.8■■□□□ 1.4
RITA1-201ENST00000548278 SEPT2Q15019 361 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 NONOQ15233 471 aaKnown RBP eCLIP23.8■■□□□ 1.4
RITA1-201ENST00000548278 KCTD1Q719H9 257 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 SMARCE1Q969G3 411 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 COA7Q96BR5 231 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 TMEM60Q9H2L4 133 aa23.8■■□□□ 1.4
RITA1-201ENST00000548278 ZBTB12Q9Y330 459 aaPredicted RBP23.8■■□□□ 1.4
RITA1-201ENST00000548278 E2F4Q16254 413 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 MTMR8Q96EF0 704 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 HDAC9Q9UKV0 1011 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 DLGAP5Q15398 846 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 ABCB5Q2M3G0 1257 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 NIM1KQ8IY84 436 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 REXO1Q8N1G1 1221 aaKnown RBP23.79■■□□□ 1.4
RITA1-201ENST00000548278 PAGE5Q96GU1 130 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 CCDC34Q96HJ3 373 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 CSRNP1Q96S65 589 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 KCNF1Q9H3M0 494 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 TMOD2Q9NZR1 351 aa23.79■■□□□ 1.4
RITA1-201ENST00000548278 ZNF70Q9UC06 446 aaPredicted RBP23.79■■□□□ 1.4
RITA1-201ENST00000548278 PPP1R11O60927 126 aaPredicted RBP23.78■■□□□ 1.4
RITA1-201ENST00000548278 GDF11O95390 407 aa23.78■■□□□ 1.4
RITA1-201ENST00000548278 SLC16A2P36021 539 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms