RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 STARD7Q9NQZ5 370 aa24.03■■□□□ 1.44
GATC-202ENST00000548171 MCM3APO60318 1980 aa24.02■■□□□ 1.44
GATC-202ENST00000548171 DCDC2CA8MYV0 355 aa24.02■■□□□ 1.44
GATC-202ENST00000548171 ACLYP53396 1101 aa24.02■■□□□ 1.44
GATC-202ENST00000548171 MAMDC4Q6UXC1 1216 aa24.02■■□□□ 1.44
GATC-202ENST00000548171 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.02■■□□□ 1.44
GATC-202ENST00000548171 FAM184BQ9ULE4 1060 aa24.02■■□□□ 1.44
GATC-202ENST00000548171 EPHB4P54760 987 aa24.01■■□□□ 1.43
GATC-202ENST00000548171 SNRNP48Q6IEG0 339 aaKnown RBP24.01■■□□□ 1.43
GATC-202ENST00000548171 DDX11Q96FC9 970 aa24.01■■□□□ 1.43
GATC-202ENST00000548171 PUS7LQ9H0K6 701 aaKnown RBP24.01■■□□□ 1.43
GATC-202ENST00000548171 NYAP2Q9P242 653 aa24.01■■□□□ 1.43
GATC-202ENST00000548171 SYNRGQ9UMZ2 1314 aa24.01■■□□□ 1.43
GATC-202ENST00000548171 ATP2A1O14983 1001 aa24■■□□□ 1.43
GATC-202ENST00000548171 FAAP100Q0VG06 881 aa24■■□□□ 1.43
GATC-202ENST00000548171 SBK1Q52WX2 424 aa24■■□□□ 1.43
GATC-202ENST00000548171 ZNF467Q7Z7K2 595 aaPredicted RBP24■■□□□ 1.43
GATC-202ENST00000548171 PRPF38AQ8NAV1 312 aaKnown RBP24■■□□□ 1.43
GATC-202ENST00000548171 KLHDC9Q8NEP7 349 aa24■■□□□ 1.43
GATC-202ENST00000548171 LENG1Q96BZ8 264 aaPredicted RBP24■■□□□ 1.43
GATC-202ENST00000548171 DNAJC25-GNG10A0A024R161 153 aa23.99■■□□□ 1.43
GATC-202ENST00000548171 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.99■■□□□ 1.43
GATC-202ENST00000548171 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.99■■□□□ 1.43
GATC-202ENST00000548171 DUSP11O75319 330 aaKnown RBP23.99■■□□□ 1.43
GATC-202ENST00000548171 SNAI1O95863 264 aaPredicted RBP23.99■■□□□ 1.43
GATC-202ENST00000548171 CHGBP05060 677 aa23.99■■□□□ 1.43
GATC-202ENST00000548171 GIMAP6Q6P9H5 292 aa23.99■■□□□ 1.43
GATC-202ENST00000548171 COG6Q9Y2V7 657 aa23.99■■□□□ 1.43
GATC-202ENST00000548171 MROH7Q68CQ1 1323 aa23.99■■□□□ 1.43
GATC-202ENST00000548171 F5H6K3 240 aa23.98■■□□□ 1.43
GATC-202ENST00000548171 TIMP1P01033 207 aa23.98■■□□□ 1.43
GATC-202ENST00000548171 RASA1P20936 1047 aa23.98■■□□□ 1.43
GATC-202ENST00000548171 CST5P28325 142 aaPredicted RBP23.98■■□□□ 1.43
GATC-202ENST00000548171 KLRC3Q07444 240 aa23.98■■□□□ 1.43
GATC-202ENST00000548171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.98■■□□□ 1.43
GATC-202ENST00000548171 PCSK9Q8NBP7 692 aaKnown RBP23.98■■□□□ 1.43
GATC-202ENST00000548171 SYMPKQ92797 1274 aaKnown RBP23.98■■□□□ 1.43
GATC-202ENST00000548171 STRBPQ96SI9 672 aaKnown RBP23.98■■□□□ 1.43
GATC-202ENST00000548171 NUP88Q99567 741 aaPredicted RBP23.98■■□□□ 1.43
GATC-202ENST00000548171 MKNK2Q9HBH9 465 aa23.98■■□□□ 1.43
GATC-202ENST00000548171 ZHX1Q9UKY1 873 aaPredicted RBP23.98■■□□□ 1.43
GATC-202ENST00000548171 ELP1O95163 1332 aa23.98■■□□□ 1.43
GATC-202ENST00000548171 ZBED4O75132 1171 aa23.97■■□□□ 1.43
GATC-202ENST00000548171 NDUFB10O96000 172 aa23.97■■□□□ 1.43
GATC-202ENST00000548171 KCNA10Q16322 511 aa23.97■■□□□ 1.43
GATC-202ENST00000548171 CCSAPQ6IQ19 270 aaPredicted RBP23.97■■□□□ 1.43
GATC-202ENST00000548171 CCDC174Q6PII3 467 aa23.97■■□□□ 1.43
GATC-202ENST00000548171 GLT1D1Q96MS3 346 aa23.97■■□□□ 1.43
GATC-202ENST00000548171 LRRCC1Q9C099 1032 aa23.97■■□□□ 1.43
GATC-202ENST00000548171 RIPK3Q9Y572 518 aa23.97■■□□□ 1.43
GATC-202ENST00000548171 EYSQ5T1H1 3165 aa23.97■■□□□ 1.43
GATC-202ENST00000548171 TTC28Q96AY4 2481 aa23.96■■□□□ 1.43
GATC-202ENST00000548171 CDH23Q9H251 3354 aa23.96■■□□□ 1.43
GATC-202ENST00000548171 ABHD16BQ9H3Z7 469 aa23.96■■□□□ 1.43
GATC-202ENST00000548171 SPC25Q9HBM1 224 aa23.96■■□□□ 1.43
GATC-202ENST00000548171 ZNF287Q9HBT7 754 aa23.96■■□□□ 1.43
GATC-202ENST00000548171 FBXO40Q9UH90 709 aa23.96■■□□□ 1.43
GATC-202ENST00000548171 TBX21Q9UL17 535 aa23.96■■□□□ 1.43
GATC-202ENST00000548171 SYNPO2Q9UMS6 1093 aa23.96■■□□□ 1.43
GATC-202ENST00000548171 CTDP1Q9Y5B0 961 aaPredicted RBP23.96■■□□□ 1.43
GATC-202ENST00000548171 DNAJB2P25686 324 aa23.95■■□□□ 1.42
GATC-202ENST00000548171 ACVR2BQ13705 512 aa23.95■■□□□ 1.42
GATC-202ENST00000548171 MYO9BQ13459 2157 aa23.94■■□□□ 1.42
GATC-202ENST00000548171 GSG1L2A8MUP6 293 aa23.94■■□□□ 1.42
GATC-202ENST00000548171 OAZ1P54368 228 aa23.94■■□□□ 1.42
GATC-202ENST00000548171 PPIGQ13427 754 aaKnown RBP eCLIP23.94■■□□□ 1.421e-6■■■■□ 20.8
GATC-202ENST00000548171 MFSD5Q6N075 450 aa23.94■■□□□ 1.42
GATC-202ENST00000548171 CPXCR1Q8N123 301 aa23.94■■□□□ 1.42
GATC-202ENST00000548171 CHST13Q8NET6 341 aa23.94■■□□□ 1.42
GATC-202ENST00000548171 UPF3AQ9H1J1 476 aaKnown RBP23.94■■□□□ 1.42
GATC-202ENST00000548171 SLC38A10Q9HBR0 1119 aa23.94■■□□□ 1.42
GATC-202ENST00000548171 ECHDC1Q9NTX5 307 aa23.94■■□□□ 1.42
GATC-202ENST00000548171 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.94■■□□□ 1.42
GATC-202ENST00000548171 VCANP13611 3396 aa23.93■■□□□ 1.42
GATC-202ENST00000548171 MINDY4BA8MYZ0 360 aa23.93■■□□□ 1.42
GATC-202ENST00000548171 C6orf222P0C671 652 aaPredicted RBP23.93■■□□□ 1.42
GATC-202ENST00000548171 GRIN2CQ14957 1233 aa23.93■■□□□ 1.42
GATC-202ENST00000548171 ANKRD35Q8N283 1001 aa23.93■■□□□ 1.42
GATC-202ENST00000548171 MKL1Q969V6 931 aa23.93■■□□□ 1.42
GATC-202ENST00000548171 ZNF576Q9H609 170 aa23.93■■□□□ 1.42
GATC-202ENST00000548171 CLIP2Q9UDT6 1046 aa23.93■■□□□ 1.42
GATC-202ENST00000548171 FEM1BQ9UK73 627 aa23.93■■□□□ 1.42
GATC-202ENST00000548171 PRUNE2Q8WUY3 3088 aa23.92■■□□□ 1.42
GATC-202ENST00000548171 IGKV6D-41A0A0C4DH26 115 aa23.92■■□□□ 1.42
GATC-202ENST00000548171 MYADML2A6NDP7 307 aa23.92■■□□□ 1.42
GATC-202ENST00000548171 ASGR1P07306 291 aa23.92■■□□□ 1.42
GATC-202ENST00000548171 GNAT2P19087 354 aa23.92■■□□□ 1.42
GATC-202ENST00000548171 SLC4A3P48751 1232 aa23.92■■□□□ 1.42
GATC-202ENST00000548171 CDK7P50613 346 aa23.92■■□□□ 1.42
GATC-202ENST00000548171 CCDC144BQ3MJ40 725 aa23.92■■□□□ 1.42
GATC-202ENST00000548171 APPBP2Q92624 585 aa23.92■■□□□ 1.42
GATC-202ENST00000548171 TIFAQ96CG3 184 aa23.92■■□□□ 1.42
GATC-202ENST00000548171 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.92■■□□□ 1.421e-12■■■■■ 32.7
GATC-202ENST00000548171 A0A0U1RQG5 324 aaPredicted RBP23.91■■□□□ 1.42
GATC-202ENST00000548171 FDX1P10109 184 aa23.91■■□□□ 1.42
GATC-202ENST00000548171 GJA9P57773 515 aa23.91■■□□□ 1.42
GATC-202ENST00000548171 ZNF444Q8N0Y2 327 aaPredicted RBP23.91■■□□□ 1.42
GATC-202ENST00000548171 TMEM199Q8N511 208 aa23.91■■□□□ 1.42
GATC-202ENST00000548171 KBTBD3Q8NAB2 608 aa23.91■■□□□ 1.42
GATC-202ENST00000548171 GMCL1P1Q8NEA9 526 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms