RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 TGFBRAP1Q8WUH2 860 aa18.17■□□□□ 0.5
CNOT2-209ENST00000548159 RWDD2AQ9UIY3 292 aa18.17■□□□□ 0.5
CNOT2-209ENST00000548159 M0R2N6 131 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 ERVK-24P63145 666 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 ZNF658Q5TYW1 1059 aaPredicted RBP18.16■□□□□ 0.5
CNOT2-209ENST00000548159 DGKHQ86XP1 1220 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
CNOT2-209ENST00000548159 LIMA1Q9UHB6 759 aaKnown RBP18.16■□□□□ 0.5
CNOT2-209ENST00000548159 SAP30BPQ9UHR5 308 aaKnown RBP18.16■□□□□ 0.5
CNOT2-209ENST00000548159 PCDHA6Q9UN73 950 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 STX8Q9UNK0 236 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 PCDHA8Q9Y5H6 950 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 LAMB1P07942 1786 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 MYH8P13535 1937 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 LDHBP07195 334 aaKnown RBP18.16■□□□□ 0.5
CNOT2-209ENST00000548159 CALML3P27482 149 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 STAT6P42226 847 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 COPB1P53618 953 aaKnown RBP18.16■□□□□ 0.5
CNOT2-209ENST00000548159 PMS1P54277 932 aaKnown RBP18.16■□□□□ 0.5
CNOT2-209ENST00000548159 TCP11X2Q5H9J9 407 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 ARL6IP4Q66PJ3 421 aaKnown RBP18.16■□□□□ 0.5
CNOT2-209ENST00000548159 TMCO3Q6UWJ1 677 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 IRF2BP1Q8IU81 584 aa18.16■□□□□ 0.5
CNOT2-209ENST00000548159 KCNJ18B7U540 433 aa18.15■□□□□ 0.5
CNOT2-209ENST00000548159 LONP1P36776 959 aaKnown RBP18.15■□□□□ 0.5
CNOT2-209ENST00000548159 KCNJ12Q14500 433 aa18.15■□□□□ 0.5
CNOT2-209ENST00000548159 RSRC2Q7L4I2 434 aaKnown RBP18.15■□□□□ 0.5
CNOT2-209ENST00000548159 HEATR3Q7Z4Q2 680 aa18.15■□□□□ 0.5
CNOT2-209ENST00000548159 EEF2KMTQ96G04 330 aa18.15■□□□□ 0.5
CNOT2-209ENST00000548159 CCDC194A0A1B0GVG4 234 aa18.15■□□□□ 0.5
CNOT2-209ENST00000548159 TSPY3P0CV98 308 aa18.15■□□□□ 0.5
CNOT2-209ENST00000548159 TSPY8P0CW00 308 aa18.15■□□□□ 0.5
CNOT2-209ENST00000548159 MAPKAPK5Q8IW41 473 aa18.15■□□□□ 0.5
CNOT2-209ENST00000548159 DISC1Q9NRI5 854 aa18.15■□□□□ 0.5
CNOT2-209ENST00000548159 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.5
CNOT2-209ENST00000548159 GRM4Q14833 912 aa18.14■□□□□ 0.49
CNOT2-209ENST00000548159 ZNF569Q5MCW4 686 aa18.14■□□□□ 0.49
CNOT2-209ENST00000548159 CNGA4Q8IV77 575 aa18.14■□□□□ 0.49
CNOT2-209ENST00000548159 NAA15Q9BXJ9 866 aaKnown RBP18.14■□□□□ 0.49
CNOT2-209ENST00000548159 SASH3O75995 380 aa18.14■□□□□ 0.49
CNOT2-209ENST00000548159 SPTY2D1Q68D10 685 aaPredicted RBP18.14■□□□□ 0.49
CNOT2-209ENST00000548159 DTHD1Q6ZMT9 781 aa18.14■□□□□ 0.49
CNOT2-209ENST00000548159 NUP88Q99567 741 aaPredicted RBP18.14■□□□□ 0.49
CNOT2-209ENST00000548159 TMEM47Q9BQJ4 181 aa18.14■□□□□ 0.49
CNOT2-209ENST00000548159 ABHD10Q9NUJ1 306 aa18.14■□□□□ 0.49
CNOT2-209ENST00000548159 ARGLU1Q9NWB6 273 aaPredicted RBP18.14■□□□□ 0.49
CNOT2-209ENST00000548159 PIP4K2BP78356 416 aa18.13■□□□□ 0.49
CNOT2-209ENST00000548159 RASSF8Q8NHQ8 419 aa18.13■□□□□ 0.49
CNOT2-209ENST00000548159 PARD6BQ9BYG5 372 aa18.13■□□□□ 0.49
CNOT2-209ENST00000548159 PUF60Q9UHX1 559 aaKnown RBP18.13■□□□□ 0.49
CNOT2-209ENST00000548159 EP400Q96L91 3159 aa18.13■□□□□ 0.49
CNOT2-209ENST00000548159 ITIH6Q6UXX5 1313 aa18.13■□□□□ 0.49
CNOT2-209ENST00000548159 ZNF444Q8N0Y2 327 aaPredicted RBP18.13■□□□□ 0.49
CNOT2-209ENST00000548159 ANKS1AQ92625 1134 aa18.13■□□□□ 0.49
CNOT2-209ENST00000548159 CHP1Q99653 195 aa18.13■□□□□ 0.49
CNOT2-209ENST00000548159 SH3GLB2Q9NR46 395 aa18.13■□□□□ 0.49
CNOT2-209ENST00000548159 GOLGB1Q14789 3259 aaKnown RBP18.12■□□□□ 0.49
CNOT2-209ENST00000548159 STXBP3O00186 592 aa18.12■□□□□ 0.49
CNOT2-209ENST00000548159 KIF20AO95235 890 aa18.12■□□□□ 0.49
CNOT2-209ENST00000548159 TXLNAP40222 546 aa18.12■□□□□ 0.49
CNOT2-209ENST00000548159 UBXN1Q04323 297 aa18.12■□□□□ 0.49
CNOT2-209ENST00000548159 GPR161Q8N6U8 529 aaKnown RBP18.12■□□□□ 0.49
CNOT2-209ENST00000548159 RTCBQ9Y3I0 505 aaKnown RBP18.12■□□□□ 0.49
CNOT2-209ENST00000548159 KIF5CO60282 957 aa18.12■□□□□ 0.49
CNOT2-209ENST00000548159 RASA1P20936 1047 aa18.12■□□□□ 0.49
CNOT2-209ENST00000548159 KRT9P35527 623 aa18.12■□□□□ 0.49
CNOT2-209ENST00000548159 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
CNOT2-209ENST00000548159 CC2D1AQ6P1N0 951 aaPredicted RBP18.12■□□□□ 0.49
CNOT2-209ENST00000548159 ADSSL1Q8N142 457 aa18.12■□□□□ 0.49
CNOT2-209ENST00000548159 BARHL2Q9NY43 387 aa18.12■□□□□ 0.49
CNOT2-209ENST00000548159 CCNL1Q9UK58 526 aaPredicted RBP18.12■□□□□ 0.49
CNOT2-209ENST00000548159 KLRC4O43908 158 aa18.11■□□□□ 0.49
CNOT2-209ENST00000548159 TBC1D8O95759 1140 aa18.11■□□□□ 0.49
CNOT2-209ENST00000548159 PARP1P09874 1014 aaKnown RBP18.11■□□□□ 0.49
CNOT2-209ENST00000548159 FECHP22830 423 aa18.11■□□□□ 0.49
CNOT2-209ENST00000548159 UBA7P41226 1012 aa18.11■□□□□ 0.49
CNOT2-209ENST00000548159 SLC35F6Q8N357 371 aa18.11■□□□□ 0.49
CNOT2-209ENST00000548159 WDR66Q8TBY9 1149 aa18.11■□□□□ 0.49
CNOT2-209ENST00000548159 SLF1Q9BQI6 1058 aa18.11■□□□□ 0.49
CNOT2-209ENST00000548159 PYM1Q9BRP8 204 aaKnown RBP18.11■□□□□ 0.49
CNOT2-209ENST00000548159 RMND1Q9NWS8 449 aa18.11■□□□□ 0.49
CNOT2-209ENST00000548159 PALM3A6NDB9 673 aaPredicted RBP18.11■□□□□ 0.49
CNOT2-209ENST00000548159 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
CNOT2-209ENST00000548159 KLRF2D3W0D1 207 aa18.1■□□□□ 0.49
CNOT2-209ENST00000548159 PES1O00541 588 aaKnown RBP18.1■□□□□ 0.49
CNOT2-209ENST00000548159 TPM1P09493 284 aa18.1■□□□□ 0.49
CNOT2-209ENST00000548159 ARHGAP25P42331 645 aa18.1■□□□□ 0.49
CNOT2-209ENST00000548159 USP17L2Q6R6M4 530 aa18.1■□□□□ 0.49
CNOT2-209ENST00000548159 TMTC1Q8IUR5 882 aa18.1■□□□□ 0.49
CNOT2-209ENST00000548159 RABGGTAQ92696 567 aa18.1■□□□□ 0.49
CNOT2-209ENST00000548159 ZBTB9Q96C00 473 aa18.1■□□□□ 0.49
CNOT2-209ENST00000548159 CCDC51Q96ER9 411 aa18.1■□□□□ 0.49
CNOT2-209ENST00000548159 TNRC6CQ9HCJ0 1690 aaKnown RBP18.1■□□□□ 0.49
CNOT2-209ENST00000548159 TTC26A0AVF1 554 aa18.09■□□□□ 0.49
CNOT2-209ENST00000548159 SPAG1Q07617 926 aa18.09■□□□□ 0.49
CNOT2-209ENST00000548159 KIF4BQ2VIQ3 1234 aa18.09■□□□□ 0.49
CNOT2-209ENST00000548159 GOLGA1Q92805 767 aa18.09■□□□□ 0.49
CNOT2-209ENST00000548159 VAT1LQ9HCJ6 419 aa18.09■□□□□ 0.49
CNOT2-209ENST00000548159 ZCCHC17Q9NP64 241 aaKnown RBP18.09■□□□□ 0.49
CNOT2-209ENST00000548159 KBTBD4Q9NVX7 518 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms