RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 PBX2P40425 430 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 ICA1Q05084 483 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 PPIGQ13427 754 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC59-202ENST00000547758 MFSD5Q6N075 450 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 CCDC174Q6PII3 467 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 RIOX2Q8IUF8 465 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 SIAH1Q8IUQ4 282 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 ADAMTS19Q8TE59 1207 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 PRDM12Q9H4Q4 367 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 SWAP70Q9UH65 585 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 CNPY2Q9Y2B0 182 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 MROH7Q68CQ1 1323 aa16.3■□□□□ 0.2
CCDC59-202ENST00000547758 MYH7P12883 1935 aa16.3■□□□□ 0.2
CCDC59-202ENST00000547758 TIE1P35590 1138 aa16.3■□□□□ 0.2
CCDC59-202ENST00000547758 TMEM240Q5SV17 173 aa16.3■□□□□ 0.2
CCDC59-202ENST00000547758 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
CCDC59-202ENST00000547758 KLHDC9Q8NEP7 349 aa16.3■□□□□ 0.2
CCDC59-202ENST00000547758 C1orf115Q9H7X2 142 aa16.3■□□□□ 0.2
CCDC59-202ENST00000547758 ADAMTS5Q9UNA0 930 aa16.3■□□□□ 0.2
CCDC59-202ENST00000547758 REV3LO60673 3130 aa16.3■□□□□ 0.2
CCDC59-202ENST00000547758 GRXCR1A8MXD5 290 aa16.29■□□□□ 0.2
CCDC59-202ENST00000547758 CYP2D6P10635 497 aa16.29■□□□□ 0.2
CCDC59-202ENST00000547758 AKR1B1P15121 316 aa16.29■□□□□ 0.2
CCDC59-202ENST00000547758 PLA2G5P39877 138 aa16.29■□□□□ 0.2
CCDC59-202ENST00000547758 MRPS5P82675 430 aaKnown RBP16.29■□□□□ 0.2
CCDC59-202ENST00000547758 KCNA10Q16322 511 aa16.29■□□□□ 0.2
CCDC59-202ENST00000547758 RASIP1Q5U651 963 aa16.29■□□□□ 0.2
CCDC59-202ENST00000547758 C16orf59Q7L2K0 433 aa16.29■□□□□ 0.2
CCDC59-202ENST00000547758 SDR42E1Q8WUS8 393 aa16.29■□□□□ 0.2
CCDC59-202ENST00000547758 UHRF1Q96T88 793 aaPredicted RBP16.29■□□□□ 0.2
CCDC59-202ENST00000547758 DCP1AQ9NPI6 582 aaPredicted RBP16.29■□□□□ 0.2
CCDC59-202ENST00000547758 XIRP2A4UGR9 3374 aa16.29■□□□□ 0.2
CCDC59-202ENST00000547758 PDE6AP16499 860 aa16.28■□□□□ 0.2
CCDC59-202ENST00000547758 COPB2P35606 906 aa16.28■□□□□ 0.2
CCDC59-202ENST00000547758 STAT3P40763 770 aa16.28■□□□□ 0.2
CCDC59-202ENST00000547758 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
CCDC59-202ENST00000547758 CCSAPQ6IQ19 270 aaPredicted RBP16.28■□□□□ 0.2
CCDC59-202ENST00000547758 DYNLL2Q96FJ2 89 aa16.28■□□□□ 0.2
CCDC59-202ENST00000547758 FBXO28Q9NVF7 368 aa16.28■□□□□ 0.2
CCDC59-202ENST00000547758 ZNF214Q9UL59 606 aaPredicted RBP16.28■□□□□ 0.2
CCDC59-202ENST00000547758 FAM184BQ9ULE4 1060 aa16.28■□□□□ 0.2
CCDC59-202ENST00000547758 GREB1LQ9C091 1923 aaPredicted RBP16.27■□□□□ 0.2
CCDC59-202ENST00000547758 ELP1O95163 1332 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 SYNGAP1Q96PV0 1343 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 MYADML2A6NDP7 307 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 VWA5AO00534 786 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 CSF2RAP15509 400 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 ADGRE1Q14246 886 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
CCDC59-202ENST00000547758 PSRC1Q6PGN9 363 aaPredicted RBP16.27■□□□□ 0.2
CCDC59-202ENST00000547758 LCORLQ8N3X6 602 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 TMEM199Q8N511 208 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
CCDC59-202ENST00000547758 IL27Q8NEV9 243 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 FAM122AQ96E09 287 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 GLT1D1Q96MS3 346 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 PPP1R9AQ9ULJ8 1098 aa16.27■□□□□ 0.2
CCDC59-202ENST00000547758 MYH4Q9Y623 1939 aa16.27■□□□□ 0.19
CCDC59-202ENST00000547758 ZNF532Q9HCE3 1301 aa16.26■□□□□ 0.19
CCDC59-202ENST00000547758 DUSP11O75319 330 aaKnown RBP16.26■□□□□ 0.19
CCDC59-202ENST00000547758 CST5P28325 142 aaPredicted RBP16.26■□□□□ 0.19
CCDC59-202ENST00000547758 CDK7P50613 346 aa16.26■□□□□ 0.19
CCDC59-202ENST00000547758 RAB30Q15771 203 aa16.26■□□□□ 0.19
CCDC59-202ENST00000547758 CCDC85BQ15834 202 aaPredicted RBP16.26■□□□□ 0.19
CCDC59-202ENST00000547758 ZNF365Q70YC5 407 aa16.26■□□□□ 0.19
CCDC59-202ENST00000547758 AACSQ86V21 672 aa16.26■□□□□ 0.19
CCDC59-202ENST00000547758 REPS2Q8NFH8 660 aa16.26■□□□□ 0.19
CCDC59-202ENST00000547758 CCDC17Q96LX7 622 aa16.26■□□□□ 0.19
CCDC59-202ENST00000547758 MSRAQ9UJ68 235 aa16.26■□□□□ 0.19
CCDC59-202ENST00000547758 ZHX1Q9UKY1 873 aaPredicted RBP16.26■□□□□ 0.19
CCDC59-202ENST00000547758 TCRBV5S4A2TA0A5A2 114 aa16.25■□□□□ 0.19
CCDC59-202ENST00000547758 SNAI1O95863 264 aaPredicted RBP16.25■□□□□ 0.19
CCDC59-202ENST00000547758 C6orf222P0C671 652 aaPredicted RBP16.25■□□□□ 0.19
CCDC59-202ENST00000547758 ACRP10323 421 aa16.25■□□□□ 0.19
CCDC59-202ENST00000547758 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
CCDC59-202ENST00000547758 IGFBP4P22692 258 aa16.25■□□□□ 0.19
CCDC59-202ENST00000547758 PCSK9Q8NBP7 692 aaKnown RBP16.25■□□□□ 0.19
CCDC59-202ENST00000547758 PPP1R12CQ9BZL4 782 aa16.25■□□□□ 0.19
CCDC59-202ENST00000547758 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
CCDC59-202ENST00000547758 PCDHB13Q9Y5F0 798 aa16.25■□□□□ 0.19
CCDC59-202ENST00000547758 A0A0U1RQG5 324 aaPredicted RBP16.24■□□□□ 0.19
CCDC59-202ENST00000547758 ARVCFO00192 962 aa16.24■□□□□ 0.19
CCDC59-202ENST00000547758 APBB1O00213 710 aa16.24■□□□□ 0.19
CCDC59-202ENST00000547758 ASGR1P07306 291 aa16.24■□□□□ 0.19
CCDC59-202ENST00000547758 IRX5P78411 483 aaPredicted RBP16.24■□□□□ 0.19
CCDC59-202ENST00000547758 FAM83BQ5T0W9 1011 aa16.24■□□□□ 0.19
CCDC59-202ENST00000547758 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
CCDC59-202ENST00000547758 MAMDC4Q6UXC1 1216 aa16.24■□□□□ 0.19
CCDC59-202ENST00000547758 MAMSTRQ6ZN01 415 aa16.24■□□□□ 0.19
CCDC59-202ENST00000547758 FAM126BQ8IXS8 530 aa16.24■□□□□ 0.19
CCDC59-202ENST00000547758 VTI1AQ96AJ9 217 aa16.24■□□□□ 0.19
CCDC59-202ENST00000547758 PRRC2BQ5JSZ5 2229 aaKnown RBP16.23■□□□□ 0.19
CCDC59-202ENST00000547758 TRANK1O15050 2925 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 TTLL13PA6NNM8 815 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 TLR3O15455 904 aaKnown RBP16.23■□□□□ 0.19
CCDC59-202ENST00000547758 RAD21O60216 631 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 CDK8P49336 464 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 ERC1Q8IUD2 1116 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 HERVK_113Q902F9 699 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms