RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ORC4O43929 436 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 RANBP6O60518 1105 aaKnown RBP14.19□□□□□ -0.14
HDAC7-226ENST00000547259 RBM25P49756 843 aaKnown RBP14.19□□□□□ -0.14
HDAC7-226ENST00000547259 GRB14Q14449 540 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 CCL14Q16627 93 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 TSGA10IPQ3SY00 556 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 DPP9Q86TI2 863 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 ARRDC4Q8NCT1 418 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 NCOA7Q8NI08 942 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 ESR2Q92731 530 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 JAKMIP1Q96N16 626 aaKnown RBP14.19□□□□□ -0.14
HDAC7-226ENST00000547259 RPAP3Q9H6T3 665 aaPredicted RBP14.19□□□□□ -0.14
HDAC7-226ENST00000547259 SH2D4AQ9H788 454 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 DDX20Q9UHI6 824 aaKnown RBP14.19□□□□□ -0.14
HDAC7-226ENST00000547259 TACC3Q9Y6A5 838 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 MYH4Q9Y623 1939 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 FRMPD3Q5JV73 1810 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 B4E1Z4 1266 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 DNM1LO00429 736 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 FGRP09769 529 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 TSPY3P0CV98 308 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 TSPY8P0CW00 308 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 RASA1P20936 1047 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 PSMA5P28066 241 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 CNGA1P29973 690 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 SHROOM1Q2M3G4 852 aaPredicted RBP14.18□□□□□ -0.14
HDAC7-226ENST00000547259 ADCK5Q3MIX3 580 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 ZNF444Q8N0Y2 327 aaPredicted RBP14.18□□□□□ -0.14
HDAC7-226ENST00000547259 SHCBP1Q8NEM2 672 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 NEK1Q96PY6 1258 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 SENP6Q9GZR1 1112 aaPredicted RBP14.18□□□□□ -0.14
HDAC7-226ENST00000547259 STXBP5LQ9Y2K9 1186 aa14.18□□□□□ -0.14
HDAC7-226ENST00000547259 TSPY2A6NKD2 308 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 MPHOSPH10O00566 681 aaKnown RBP14.17□□□□□ -0.14
HDAC7-226ENST00000547259 PEX10O60683 326 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 KDM4AO75164 1064 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 CNMDO75829 334 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 CASTP20810 708 aaKnown RBP14.17□□□□□ -0.14
HDAC7-226ENST00000547259 LRRC26Q2I0M4 334 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 FAM47AQ5JRC9 791 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 OLFML2BQ68BL8 750 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 BLOC1S2Q6QNY1 142 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 TMEM179Q6ZVK1 233 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 ACER1Q8TDN7 264 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 MROH8Q9H579 483 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 ARHGEF10LQ9HCE6 1279 aa14.17□□□□□ -0.14
HDAC7-226ENST00000547259 ZNFX1Q9P2E3 1918 aaKnown RBP14.16□□□□□ -0.14
HDAC7-226ENST00000547259 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
HDAC7-226ENST00000547259 HMGB1P09429 215 aaKnown RBP14.16□□□□□ -0.14
HDAC7-226ENST00000547259 AKR1B1P15121 316 aa14.16□□□□□ -0.14
HDAC7-226ENST00000547259 NT5C2P49902 561 aa14.16□□□□□ -0.14
HDAC7-226ENST00000547259 TFAP4Q01664 338 aa14.16□□□□□ -0.14
HDAC7-226ENST00000547259 FAM109BQ6ICB4 259 aaPredicted RBP14.16□□□□□ -0.14
HDAC7-226ENST00000547259 MB21D2Q8IYB1 491 aaPredicted RBP14.16□□□□□ -0.14
HDAC7-226ENST00000547259 ABRAQ8N0Z2 381 aa14.16□□□□□ -0.14
HDAC7-226ENST00000547259 CCDC17Q96LX7 622 aa14.16□□□□□ -0.14
HDAC7-226ENST00000547259 TANGO6Q9C0B7 1094 aa14.16□□□□□ -0.14
HDAC7-226ENST00000547259 BTBD7Q9P203 1132 aa14.16□□□□□ -0.14
HDAC7-226ENST00000547259 PLIN4Q96Q06 1357 aa14.16□□□□□ -0.14
HDAC7-226ENST00000547259 KBTBD13C9JR72 458 aa14.15□□□□□ -0.14
HDAC7-226ENST00000547259 MCM5P33992 734 aa14.15□□□□□ -0.14
HDAC7-226ENST00000547259 SEPT2Q15019 361 aa14.15□□□□□ -0.14
HDAC7-226ENST00000547259 POTEEQ6S8J3 1075 aa14.15□□□□□ -0.14
HDAC7-226ENST00000547259 CYB5R4Q7L1T6 521 aa14.15□□□□□ -0.14
HDAC7-226ENST00000547259 TM6SF1Q9BZW5 370 aa14.15□□□□□ -0.14
HDAC7-226ENST00000547259 SPATC1LQ9H0A9 340 aa14.15□□□□□ -0.14
HDAC7-226ENST00000547259 CYP46A1Q9Y6A2 500 aa14.15□□□□□ -0.14
HDAC7-226ENST00000547259 ZNF236Q9UL36 1845 aa14.15□□□□□ -0.14
HDAC7-226ENST00000547259 LAMA2P24043 3122 aaKnown RBP14.15□□□□□ -0.14
HDAC7-226ENST00000547259 PRC1O43663 620 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 SLC25A27O95847 323 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 CPA1P15085 419 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 RPS6KB1P23443 525 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 ADORA2AP29274 412 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 CYP2C19P33261 490 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 MDM2Q00987 491 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-226ENST00000547259 CHST3Q7LGC8 479 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 IQCA1Q86XH1 822 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 NEDD1Q8NHV4 660 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 IL17RAQ96F46 866 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 ZKSCAN3Q9BRR0 538 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 UBAC1Q9BSL1 405 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 MOV10L1Q9BXT6 1211 aaKnown RBP14.14□□□□□ -0.15
HDAC7-226ENST00000547259 UPF3BQ9BZI7 483 aaKnown RBP14.14□□□□□ -0.15
HDAC7-226ENST00000547259 MTMR10Q9NXD2 777 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 FLRT1Q9NZU1 646 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 WDR19Q8NEZ3 1342 aa14.14□□□□□ -0.15
HDAC7-226ENST00000547259 ERICH2A1L162 156 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 SEPT4O43236 478 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 CYBAP13498 195 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 DSG3P32926 999 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 GUCY1A2P33402 732 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 COPB2P35606 906 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 ANTXR2P58335 489 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 SART3Q15020 963 aaKnown RBP14.13□□□□□ -0.15
HDAC7-226ENST00000547259 RABEP1Q15276 862 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 RUFY3Q7L099 469 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 DHX32Q7L7V1 743 aaKnown RBP14.13□□□□□ -0.15
HDAC7-226ENST00000547259 NPLOC4Q8TAT6 608 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 TCEANC2Q96MN5 208 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms