RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 PPP2R3BQ9Y5P8 575 aa8.56□□□□□ -1.04
CCDC60-205ENST00000546345 FANCIQ9NVI1 1328 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 IRS2Q9Y4H2 1338 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 DOCK1Q14185 1865 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 CLRN2A0PK11 232 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 WIPF1O43516 503 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 ARID4AP29374 1257 aaPredicted RBP8.55□□□□□ -1.04
CCDC60-205ENST00000546345 GRK4P32298 578 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 PRMT2P55345 433 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 LAMC2Q13753 1193 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 VGLL4Q14135 290 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 DIS3LQ8TF46 1054 aaKnown RBP8.55□□□□□ -1.04
CCDC60-205ENST00000546345 YTHDC1Q96MU7 727 aaKnown RBP8.55□□□□□ -1.04
CCDC60-205ENST00000546345 PLEKHF1Q96S99 279 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 RNF208Q9H0X6 261 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 BRD7Q9NPI1 651 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 MARK1Q9P0L2 795 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 CHPF2Q9P2E5 772 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 DMGDHQ9UI17 866 aaKnown RBP8.55□□□□□ -1.04
CCDC60-205ENST00000546345 LOC285556D6RIA3 1793 aa8.55□□□□□ -1.04
CCDC60-205ENST00000546345 ATAD5Q96QE3 1844 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 BTBD19C9JJ37 291 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 EFSO43281 561 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 MICAL2O94851 1124 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 NEFLP07196 543 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 IREB2P48200 963 aaKnown RBP8.54□□□□□ -1.04
CCDC60-205ENST00000546345 CTBSQ01459 385 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 TYRO3Q06418 890 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 CNGB1Q14028 1251 aaPredicted RBP8.54□□□□□ -1.04
CCDC60-205ENST00000546345 ARHGEF6Q15052 776 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 TDHQ8IZJ6 230 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 PLBD2Q8NHP8 589 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC60-205ENST00000546345 GTF3C2Q8WUA4 911 aaPredicted RBP8.54□□□□□ -1.04
CCDC60-205ENST00000546345 TEPSINQ96N21 525 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 ZMYND8Q9ULU4 1186 aaPredicted RBP8.54□□□□□ -1.04
CCDC60-205ENST00000546345 RLFQ13129 1914 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 MYPNQ86TC9 1320 aa8.54□□□□□ -1.04
CCDC60-205ENST00000546345 DNAH12Q6ZR08 3092 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 BRD1O95696 1058 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 BMP4P12644 408 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 CD33P20138 364 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 PLA2G5P39877 138 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 MAGEA10P43363 369 aaPredicted RBP8.53□□□□□ -1.04
CCDC60-205ENST00000546345 IDH3AP50213 366 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 PRKCZQ05513 592 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 SRSF11Q05519 484 aaKnown RBP8.53□□□□□ -1.04
CCDC60-205ENST00000546345 SFSWAPQ12872 951 aaKnown RBP8.53□□□□□ -1.04
CCDC60-205ENST00000546345 C17orf99Q6UX52 265 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 C7orf61Q8IZ16 206 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 TRAIPQ9BWF2 469 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 COA1Q9GZY4 146 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 STIM2Q9P246 746 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 TSPYL4Q9UJ04 414 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 SNCAIPQ9Y6H5 919 aa8.53□□□□□ -1.04
CCDC60-205ENST00000546345 CCER2I3L3R5 266 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 TNFRSF10BO14763 440 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 SGPL1O95470 568 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 SYN1P17600 705 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 PSMC4P43686 418 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 MAP2K3P46734 347 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 MMP14P50281 582 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 CCT4P50991 539 aaKnown RBP8.52□□□□□ -1.05
CCDC60-205ENST00000546345 GTF2A2P52657 109 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 TRIM28Q13263 835 aaKnown RBP8.52□□□□□ -1.05
CCDC60-205ENST00000546345 RASA3Q14644 834 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 NFE2L2Q16236 605 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 TREML1Q86YW5 311 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 ZBTB38Q8NAP3 1195 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-205ENST00000546345 HELQQ8TDG4 1101 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 PRMT6Q96LA8 375 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-205ENST00000546345 CFAP53Q96M91 514 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 ZCCHC17Q9NP64 241 aaKnown RBP8.52□□□□□ -1.05
CCDC60-205ENST00000546345 PAK6Q9NQU5 681 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-205ENST00000546345 CPA4Q9UI42 421 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 KCNH4Q9UQ05 1017 aa8.52□□□□□ -1.05
CCDC60-205ENST00000546345 ABL1P00519 1130 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 PDIA4P13667 645 aaKnown RBP8.51□□□□□ -1.05
CCDC60-205ENST00000546345 EPB42P16452 691 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 PPP2R1AP30153 589 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 DLGAP5Q15398 846 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 SUPT20HL1Q3ZLR7 823 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 CFAP100Q494V2 611 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 CCDC152Q4G0S7 254 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 TTLL5Q6EMB2 1281 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 ANKRD18AQ8IVF6 992 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 RAET1EQ8TD07 263 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 JARID2Q92833 1246 aaPredicted RBP8.51□□□□□ -1.05
CCDC60-205ENST00000546345 PAWRQ96IZ0 340 aaKnown RBP8.51□□□□□ -1.05
CCDC60-205ENST00000546345 VEZTQ9HBM0 779 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 GABRQQ9UN88 632 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 MINPP1Q9UNW1 487 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 NUDCQ9Y266 331 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 TCF20Q9UGU0 1960 aaKnown RBP8.51□□□□□ -1.05
CCDC60-205ENST00000546345 GBF1Q92538 1859 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 MYO9BQ13459 2157 aa8.51□□□□□ -1.05
CCDC60-205ENST00000546345 C2CD2LO14523 706 aa8.5□□□□□ -1.05
CCDC60-205ENST00000546345 ELNP15502 786 aa8.5□□□□□ -1.05
CCDC60-205ENST00000546345 INPP5BP32019 993 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms