RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PITPNM2Q9BZ72 1349 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 ZNF532Q9HCE3 1301 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 TCRBV5S4A2TA0A5A2 114 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 CLRN2A0PK11 232 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 CDK2AP1O14519 115 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 BACH1O14867 736 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 CHGBP05060 677 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 LDHCP07864 332 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 ZFYP08048 801 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-211ENST00000546304 PHKA2P46019 1235 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 HIRAP54198 1017 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-211ENST00000546304 GAS6Q14393 721 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 LRRFIP1Q32MZ4 808 aaKnown RBP7.62□□□□□ -1.19
PRKDC-211ENST00000546304 NBPF9Q3BBW0 867 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 BMP2KLQ5H9B9 411 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 ANGEL2Q5VTE6 544 aaKnown RBP7.62□□□□□ -1.19
PRKDC-211ENST00000546304 ZSCAN25Q6NSZ9 544 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 APOBEC3HQ6NTF7 200 aaKnown RBP7.62□□□□□ -1.19
PRKDC-211ENST00000546304 APOBEC3FQ8IUX4 373 aaKnown RBP7.62□□□□□ -1.19
PRKDC-211ENST00000546304 ZNF295-AS1Q8N0V1 137 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 MIGA1Q8NAN2 632 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 RILPL2Q969X0 211 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 NOL10Q9BSC4 688 aaKnown RBP7.62□□□□□ -1.19
PRKDC-211ENST00000546304 MRIQ9BWK5 157 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 TMOD2Q9NZR1 351 aa7.62□□□□□ -1.19
PRKDC-211ENST00000546304 COL2A1P02458 1487 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-211ENST00000546304 GPR75-ASB3A0A0A6YYF3 556 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 A6NJY4 79 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 SDSP20132 328 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 ATP1A2P50993 1020 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 TNFAIP1Q13829 316 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 LBRQ14739 615 aaKnown RBP7.61□□□□□ -1.19
PRKDC-211ENST00000546304 UBE3CQ15386 1083 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 CDC42EP5Q6NZY7 148 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 CERS3Q8IU89 383 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 APPBP2Q92624 585 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 PRMT6Q96LA8 375 aaPredicted RBP7.61□□□□□ -1.19
PRKDC-211ENST00000546304 NIFKQ9BYG3 293 aaKnown RBP7.61□□□□□ -1.19
PRKDC-211ENST00000546304 NUCKS1Q9H1E3 243 aaKnown RBP7.61□□□□□ -1.19
PRKDC-211ENST00000546304 TDRD3Q9H7E2 651 aaKnown RBP7.61□□□□□ -1.19
PRKDC-211ENST00000546304 VEZTQ9HBM0 779 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 AATFQ9NY61 560 aaKnown RBP eCLIP7.61□□□□□ -1.19
PRKDC-211ENST00000546304 SERTAD1Q9UHV2 236 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 ATAD5Q96QE3 1844 aa7.61□□□□□ -1.19
PRKDC-211ENST00000546304 SSC5DA1L4H1 1573 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 A0A0D9SFI3 127 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 ADM5C9JUS6 153 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 HIP1O00291 1037 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 RNF113AO15541 343 aaKnown RBP7.6□□□□□ -1.19
PRKDC-211ENST00000546304 WDHD1O75717 1129 aaPredicted RBP7.6□□□□□ -1.19
PRKDC-211ENST00000546304 MBD4O95243 580 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 BAG3O95817 575 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 MSX1P28360 303 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 CACNB3P54284 484 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 RHBDL3P58872 404 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 NFIAQ12857 509 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 MAP1SQ66K74 1059 aaPredicted RBP7.6□□□□□ -1.19
PRKDC-211ENST00000546304 KRT26Q7Z3Y9 468 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 TICAM2Q86XR7 235 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 TEX11Q8IYF3 940 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 LCORLQ8N3X6 602 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 C1orf216Q8TAB5 229 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 SH3RF3Q8TEJ3 882 aaPredicted RBP7.6□□□□□ -1.19
PRKDC-211ENST00000546304 GTPBP3Q969Y2 492 aaKnown RBP7.6□□□□□ -1.19
PRKDC-211ENST00000546304 AIDAQ96BJ3 306 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 DCPSQ96C86 337 aaKnown RBP7.6□□□□□ -1.19
PRKDC-211ENST00000546304 CALR3Q96L12 384 aaKnown RBP7.6□□□□□ -1.19
PRKDC-211ENST00000546304 RIOK1Q9BRS2 568 aaKnown RBP7.6□□□□□ -1.19
PRKDC-211ENST00000546304 DIAPH3Q9NSV4 1193 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 ZNF358Q9NW07 568 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 ZNF70Q9UC06 446 aaPredicted RBP7.6□□□□□ -1.19
PRKDC-211ENST00000546304 PCNTO95613 3336 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 DOCK1Q14185 1865 aa7.6□□□□□ -1.19
PRKDC-211ENST00000546304 CNTNAP1P78357 1384 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 FLT1P17948 1338 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 RAD50Q92878 1312 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 M0R2C6 588 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 GPAA1O43292 621 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 TOMM70O94826 608 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 THBS1P07996 1170 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 TNNI2P48788 182 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 DYNLL1P63167 89 aaKnown RBP7.59□□□□□ -1.19
PRKDC-211ENST00000546304 CLDN10P78369 228 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 SRSF11Q05519 484 aaKnown RBP7.59□□□□□ -1.19
PRKDC-211ENST00000546304 NMIQ13287 307 aaPredicted RBP7.59□□□□□ -1.19
PRKDC-211ENST00000546304 ZMYM1Q5SVZ6 1142 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 FKBP1CQ5VVH2 108 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 SMC1BQ8NDV3 1235 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 OSBP2Q969R2 916 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 FAM227BQ96M60 508 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 TRERF1Q96PN7 1200 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 GLIS2Q9BZE0 524 aaPredicted RBP7.59□□□□□ -1.19
PRKDC-211ENST00000546304 PUS7LQ9H0K6 701 aaKnown RBP7.59□□□□□ -1.19
PRKDC-211ENST00000546304 ARMT1Q9H993 441 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 GPAMQ9HCL2 828 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 USP40Q9NVE5 1235 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 SCHIP1Q9P0W5 487 aaPredicted RBP7.59□□□□□ -1.19
PRKDC-211ENST00000546304 TFIP11Q9UBB9 837 aaKnown RBP7.59□□□□□ -1.19
PRKDC-211ENST00000546304 MKRN1Q9UHC7 482 aaKnown RBP7.59□□□□□ -1.19
PRKDC-211ENST00000546304 PGAP2Q9UHJ9 254 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms