RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 CYP2B6P20813 491 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 STAT3P40763 770 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 SLC1A4P43007 532 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 PTH1RQ03431 593 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 FAM160B2Q86V87 743 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 DGKHQ86XP1 1220 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 DCAF4Q8WV16 495 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 TRIB2Q92519 343 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 ANKS1AQ92625 1134 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 MAP4K1Q92918 833 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 TEX13BQ9BXU2 312 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 KRT23Q9C075 422 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 SLC38A10Q9HBR0 1119 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 KDM4AO75164 1064 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 CYP21A2P08686 494 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 CAPN2P17655 700 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 MCCP23508 829 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 STAT2P52630 851 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 OAZ1P54368 228 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 PLS1Q14651 629 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 MAP3K21Q5TCX8 1036 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 WDR78Q5VTH9 848 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 IQCA1Q86XH1 822 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 NCAPG2Q86XI2 1143 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 CHURC1Q8WUH1 139 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 ESYT1Q9BSJ8 1104 aa13.98□□□□□ -0.17
YBX3-217ENST00000546164 PAK6Q9NQU5 681 aaPredicted RBP13.98□□□□□ -0.17
YBX3-217ENST00000546164 ZNF236Q9UL36 1845 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 B4E1Z4 1266 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 TMEM232C9JQI7 657 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 ZBED4O75132 1171 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 MYCP01106 439 aaPredicted RBP13.97□□□□□ -0.17
YBX3-217ENST00000546164 IGHA2P01877 340 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 SNHG28P0DPA3 235 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
YBX3-217ENST00000546164 EN2P19622 333 aaPredicted RBP13.97□□□□□ -0.17
YBX3-217ENST00000546164 ADORA2AP29274 412 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 GJA8P48165 433 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.97□□□□□ -0.17
YBX3-217ENST00000546164 KIFC2Q96AC6 838 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 RNF208Q9H0X6 261 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 UNC93B1Q9H1C4 597 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 ZSWIM5Q9P217 1185 aa13.97□□□□□ -0.17
YBX3-217ENST00000546164 TNRC18O15417 2968 aaPredicted RBP13.97□□□□□ -0.17
YBX3-217ENST00000546164 PDE4DIPQ5VU43 2346 aa13.96□□□□□ -0.17
YBX3-217ENST00000546164 PDHBP11177 359 aa13.96□□□□□ -0.17
YBX3-217ENST00000546164 FCER1AP12319 257 aa13.96□□□□□ -0.17
YBX3-217ENST00000546164 CCL14Q16627 93 aa13.96□□□□□ -0.17
YBX3-217ENST00000546164 BTNL9Q6UXG8 535 aa13.96□□□□□ -0.17
YBX3-217ENST00000546164 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
YBX3-217ENST00000546164 KCTD1Q719H9 257 aa13.96□□□□□ -0.17
YBX3-217ENST00000546164 SHISA4Q96DD7 197 aa13.96□□□□□ -0.17
YBX3-217ENST00000546164 ZSCAN10Q96SZ4 725 aaPredicted RBP13.96□□□□□ -0.17
YBX3-217ENST00000546164 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.17
YBX3-217ENST00000546164 RPTORQ8N122 1335 aa13.95□□□□□ -0.18
YBX3-217ENST00000546164 TRIM32Q13049 653 aa13.95□□□□□ -0.18
YBX3-217ENST00000546164 TRDNQ13061 729 aa13.95□□□□□ -0.18
YBX3-217ENST00000546164 OLFML2BQ68BL8 750 aa13.95□□□□□ -0.18
YBX3-217ENST00000546164 SNRNP48Q6IEG0 339 aaKnown RBP13.95□□□□□ -0.18
YBX3-217ENST00000546164 RASGRP2Q7LDG7 609 aa13.95□□□□□ -0.18
YBX3-217ENST00000546164 ENAHQ8N8S7 591 aaPredicted RBP13.95□□□□□ -0.18
YBX3-217ENST00000546164 NPLOC4Q8TAT6 608 aa13.95□□□□□ -0.18
YBX3-217ENST00000546164 U2AF1L4Q8WU68 220 aaKnown RBP13.95□□□□□ -0.18
YBX3-217ENST00000546164 ZKSCAN3Q9BRR0 538 aa13.95□□□□□ -0.18
YBX3-217ENST00000546164 CRISPLD2Q9H0B8 497 aa13.95□□□□□ -0.18
YBX3-217ENST00000546164 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.95□□□□□ -0.18
YBX3-217ENST00000546164 HMX1Q9NP08 348 aaPredicted RBP13.95□□□□□ -0.18
YBX3-217ENST00000546164 PPP4R2Q9NY27 417 aa13.95□□□□□ -0.18
YBX3-217ENST00000546164 SLC5A4Q9NY91 659 aa13.95□□□□□ -0.18
YBX3-217ENST00000546164 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
YBX3-217ENST00000546164 ZNF536O15090 1300 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 TNKSO95271 1327 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 COBLO75128 1261 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 CDC45O75419 566 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 SGPL1O95470 568 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
YBX3-217ENST00000546164 ZNF543Q08ER8 600 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 KCTD2Q14681 263 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 CCDC96Q2M329 555 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 MFSD14CQ5VZR4 134 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 DPP9Q86TI2 863 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 CPXCR1Q8N123 301 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 UBAC1Q9BSL1 405 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 RAVER2Q9HCJ3 691 aaKnown RBP13.94□□□□□ -0.18
YBX3-217ENST00000546164 FLRT1Q9NZU1 646 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 FBXO40Q9UH90 709 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 PRR12Q9ULL5 1215 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 ISY1Q9ULR0 285 aaKnown RBP13.94□□□□□ -0.18
YBX3-217ENST00000546164 DIS3Q9Y2L1 958 aaKnown RBP13.94□□□□□ -0.18
YBX3-217ENST00000546164 RIPK3Q9Y572 518 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 CTDP1Q9Y5B0 961 aaPredicted RBP13.94□□□□□ -0.18
YBX3-217ENST00000546164 TAF6LQ9Y6J9 622 aa13.94□□□□□ -0.18
YBX3-217ENST00000546164 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
YBX3-217ENST00000546164 E7EWF7 191 aa13.93□□□□□ -0.18
YBX3-217ENST00000546164 CACNB2Q08289 660 aaPredicted RBP13.93□□□□□ -0.18
YBX3-217ENST00000546164 IKQ13123 557 aaPredicted RBP13.93□□□□□ -0.18
YBX3-217ENST00000546164 SEC23AQ15436 765 aa13.93□□□□□ -0.18
YBX3-217ENST00000546164 TKFCQ3LXA3 575 aa13.93□□□□□ -0.18
YBX3-217ENST00000546164 GPATCH4Q5T3I0 446 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms