RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 IKQ13123 557 aaPredicted RBP23.94■■□□□ 1.42
HMGA2-211ENST00000545998 ASPRV1Q53RT3 343 aa23.94■■□□□ 1.42
HMGA2-211ENST00000545998 ZNF654Q8IZM8 581 aa23.94■■□□□ 1.42
HMGA2-211ENST00000545998 REPS2Q8NFH8 660 aa23.94■■□□□ 1.42
HMGA2-211ENST00000545998 CCDC69A6NI79 296 aa23.93■■□□□ 1.42
HMGA2-211ENST00000545998 PARP1P09874 1014 aaKnown RBP23.93■■□□□ 1.42
HMGA2-211ENST00000545998 GOLGA8HP0CJ92 632 aa23.93■■□□□ 1.42
HMGA2-211ENST00000545998 CTGFP29279 349 aa23.93■■□□□ 1.42
HMGA2-211ENST00000545998 TMEM132BQ14DG7 1078 aa23.93■■□□□ 1.42
HMGA2-211ENST00000545998 NFXL1Q6ZNB6 911 aa23.93■■□□□ 1.42
HMGA2-211ENST00000545998 FBXL16Q8N461 479 aa23.93■■□□□ 1.42
HMGA2-211ENST00000545998 ARHGAP39Q9C0H5 1083 aa23.93■■□□□ 1.42
HMGA2-211ENST00000545998 SLC16A2P36021 539 aa23.92■■□□□ 1.42
HMGA2-211ENST00000545998 KIF22Q14807 665 aa23.92■■□□□ 1.42
HMGA2-211ENST00000545998 SLC38A10Q9HBR0 1119 aa23.92■■□□□ 1.42
HMGA2-211ENST00000545998 MAD2L2Q9UI95 211 aa23.92■■□□□ 1.42
HMGA2-211ENST00000545998 PRR12Q9ULL5 1215 aa23.92■■□□□ 1.42
HMGA2-211ENST00000545998 CYP46A1Q9Y6A2 500 aa23.92■■□□□ 1.42
HMGA2-211ENST00000545998 DDAH1O94760 285 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 GRM4Q14833 912 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 Q6ZUG5 572 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 MAP3K14Q99558 947 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 AGXT2Q9BYV1 514 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 UPF3BQ9BZI7 483 aaKnown RBP23.91■■□□□ 1.42
HMGA2-211ENST00000545998 SPATC1LQ9H0A9 340 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 PALM3A6NDB9 673 aaPredicted RBP23.91■■□□□ 1.42
HMGA2-211ENST00000545998 ZBED4O75132 1171 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 FDX1P10109 184 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 PSMC4P43686 418 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 SYDE2Q5VT97 1194 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 STAG2Q8N3U4 1231 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 TRIM47Q96LD4 638 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 MYL10Q9BUA6 226 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 ZNF214Q9UL59 606 aaPredicted RBP23.91■■□□□ 1.42
HMGA2-211ENST00000545998 SLC12A7Q9Y666 1083 aa23.91■■□□□ 1.42
HMGA2-211ENST00000545998 BACH2Q9BYV9 841 aa23.9■■□□□ 1.42
HMGA2-211ENST00000545998 C22orf23Q9BZE7 217 aa23.9■■□□□ 1.42
HMGA2-211ENST00000545998 PORCNQ9H237 461 aa23.9■■□□□ 1.42
HMGA2-211ENST00000545998 BRPF3Q9ULD4 1205 aa23.9■■□□□ 1.42
HMGA2-211ENST00000545998 ATP2A1O14983 1001 aa23.89■■□□□ 1.41
HMGA2-211ENST00000545998 ECM2O94769 699 aaPredicted RBP23.89■■□□□ 1.41
HMGA2-211ENST00000545998 FCGRTP55899 365 aa23.89■■□□□ 1.41
HMGA2-211ENST00000545998 CCNA1P78396 465 aa23.89■■□□□ 1.41
HMGA2-211ENST00000545998 FGD1P98174 961 aa23.89■■□□□ 1.41
HMGA2-211ENST00000545998 APOA5Q6Q788 366 aa23.89■■□□□ 1.41
HMGA2-211ENST00000545998 NUP133Q8WUM0 1156 aa23.89■■□□□ 1.41
HMGA2-211ENST00000545998 MOV10L1Q9BXT6 1211 aaKnown RBP23.89■■□□□ 1.41
HMGA2-211ENST00000545998 UBA5Q9GZZ9 404 aa23.89■■□□□ 1.41
HMGA2-211ENST00000545998 CPVLQ9H3G5 476 aa23.89■■□□□ 1.41
HMGA2-211ENST00000545998 BAZ2BQ9UIF8 2168 aaKnown RBP23.89■■□□□ 1.41
HMGA2-211ENST00000545998 PLS1Q14651 629 aa23.88■■□□□ 1.41
HMGA2-211ENST00000545998 ARHGEF6Q15052 776 aa23.88■■□□□ 1.41
HMGA2-211ENST00000545998 BRF1Q92994 677 aa23.88■■□□□ 1.41
HMGA2-211ENST00000545998 RANBP17Q9H2T7 1088 aaKnown RBP23.88■■□□□ 1.41
HMGA2-211ENST00000545998 EFCC1Q9HA90 598 aa23.88■■□□□ 1.41
HMGA2-211ENST00000545998 SMCHD1A6NHR9 2005 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 KLRF2D3W0D1 207 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 FMNL1O95466 1100 aaPredicted RBP23.87■■□□□ 1.41
HMGA2-211ENST00000545998 CALM1P0DP23 149 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 CALM2P0DP24 149 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 CALM3P0DP25 149 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 MAPK4P31152 587 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 STAT3P40763 770 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 RBM25P49756 843 aaKnown RBP23.87■■□□□ 1.41
HMGA2-211ENST00000545998 OAZ1P54368 228 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 SNAP25P60880 206 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 OTOP1Q7RTM1 612 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 CTU1Q7Z7A3 348 aaKnown RBP23.87■■□□□ 1.41
HMGA2-211ENST00000545998 CTDP1Q9Y5B0 961 aaPredicted RBP23.87■■□□□ 1.41
HMGA2-211ENST00000545998 MYH6P13533 1939 aa23.87■■□□□ 1.41
HMGA2-211ENST00000545998 GNRH1P01148 92 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 TOB2Q14106 344 aaPredicted RBP23.86■■□□□ 1.41
HMGA2-211ENST00000545998 RIOX2Q8IUF8 465 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 SHCBP1Q8NEM2 672 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 CTCFLQ8NI51 663 aaPredicted RBP23.86■■□□□ 1.41
HMGA2-211ENST00000545998 TEX13BQ9BXU2 312 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 UPF2Q9HAU5 1272 aaKnown RBP23.86■■□□□ 1.41
HMGA2-211ENST00000545998 RAVER2Q9HCJ3 691 aaKnown RBP23.86■■□□□ 1.41
HMGA2-211ENST00000545998 PDRG1Q9NUG6 133 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 TRIM17Q9Y577 477 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 ZNF536O15090 1300 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 KLF18A0A0U1RQI7 1052 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 TNPO2O14787 897 aaKnown RBP23.86■■□□□ 1.41
HMGA2-211ENST00000545998 RXRAP19793 462 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 APOBRQ0VD83 1088 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 SYNE3Q6ZMZ3 975 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 MICU3Q86XE3 530 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 RAB11FIP4Q86YS3 637 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 ADGRF4Q8IZF3 695 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 CPXCR1Q8N123 301 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 PLXNB2O15031 1838 aa23.86■■□□□ 1.41
HMGA2-211ENST00000545998 SLC25A27O95847 323 aa23.85■■□□□ 1.41
HMGA2-211ENST00000545998 ERCC3P19447 782 aa23.85■■□□□ 1.41
HMGA2-211ENST00000545998 KIF5BP33176 963 aa23.85■■□□□ 1.41
HMGA2-211ENST00000545998 SNRNP48Q6IEG0 339 aaKnown RBP23.85■■□□□ 1.41
HMGA2-211ENST00000545998 GPR142Q7Z601 462 aa23.85■■□□□ 1.41
HMGA2-211ENST00000545998 KIF2CQ99661 725 aa23.85■■□□□ 1.41
HMGA2-211ENST00000545998 ZBTB43O43298 467 aa23.84■■□□□ 1.41
HMGA2-211ENST00000545998 EVCP57679 992 aa23.84■■□□□ 1.41
HMGA2-211ENST00000545998 SLC35G1Q2M3R5 365 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms