RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 FAAP100Q0VG06 881 aa20.03■□□□□ 0.8
CPSF7-225ENST00000545934 MAMDC4Q6UXC1 1216 aa20.03■□□□□ 0.8
CPSF7-225ENST00000545934 ARPP21Q9UBL0 812 aaPredicted RBP20.03■□□□□ 0.8
CPSF7-225ENST00000545934 SNAI1O95863 264 aaPredicted RBP20.02■□□□□ 0.8
CPSF7-225ENST00000545934 RAG1P15918 1043 aa20.02■□□□□ 0.8
CPSF7-225ENST00000545934 ACLYP53396 1101 aa20.02■□□□□ 0.8
CPSF7-225ENST00000545934 SBK1Q52WX2 424 aa20.02■□□□□ 0.8
CPSF7-225ENST00000545934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.02■□□□□ 0.8
CPSF7-225ENST00000545934 DDRGK1Q96HY6 314 aa20.02■□□□□ 0.8
CPSF7-225ENST00000545934 RNPC3Q96LT9 517 aaKnown RBP20.02■□□□□ 0.8
CPSF7-225ENST00000545934 SLF1Q9BQI6 1058 aa20.02■□□□□ 0.8
CPSF7-225ENST00000545934 TEX13BQ9BXU2 312 aa20.02■□□□□ 0.8
CPSF7-225ENST00000545934 RIPK3Q9Y572 518 aa20.02■□□□□ 0.8
CPSF7-225ENST00000545934 MOXD2PA6NHM9 499 aa20.01■□□□□ 0.79
CPSF7-225ENST00000545934 ATP2A1O14983 1001 aa20.01■□□□□ 0.79
CPSF7-225ENST00000545934 PQBP1O60828 265 aaKnown RBP20.01■□□□□ 0.79
CPSF7-225ENST00000545934 RASA1P20936 1047 aa20.01■□□□□ 0.79
CPSF7-225ENST00000545934 FPGSQ05932 587 aa20.01■□□□□ 0.79
CPSF7-225ENST00000545934 ZSCAN25Q6NSZ9 544 aa20.01■□□□□ 0.79
CPSF7-225ENST00000545934 ZNF467Q7Z7K2 595 aaPredicted RBP20.01■□□□□ 0.79
CPSF7-225ENST00000545934 STRBPQ96SI9 672 aaKnown RBP20.01■□□□□ 0.79
CPSF7-225ENST00000545934 NUP88Q99567 741 aaPredicted RBP20.01■□□□□ 0.79
CPSF7-225ENST00000545934 NYAP2Q9P242 653 aa20.01■□□□□ 0.79
CPSF7-225ENST00000545934 CNPY2Q9Y2B0 182 aa20.01■□□□□ 0.79
CPSF7-225ENST00000545934 COG6Q9Y2V7 657 aa20.01■□□□□ 0.79
CPSF7-225ENST00000545934 LCTP09848 1927 aa20.01■□□□□ 0.79
CPSF7-225ENST00000545934 IGKV6D-41A0A0C4DH26 115 aa20■□□□□ 0.79
CPSF7-225ENST00000545934 F5H6K3 240 aa20■□□□□ 0.79
CPSF7-225ENST00000545934 CST5P28325 142 aaPredicted RBP20■□□□□ 0.79
CPSF7-225ENST00000545934 KLRC3Q07444 240 aa20■□□□□ 0.79
CPSF7-225ENST00000545934 STARD7Q9NQZ5 370 aa20■□□□□ 0.79
CPSF7-225ENST00000545934 TMEM39AQ9NV64 488 aa20■□□□□ 0.79
CPSF7-225ENST00000545934 TBX21Q9UL17 535 aa20■□□□□ 0.79
CPSF7-225ENST00000545934 FAM184BQ9ULE4 1060 aa20■□□□□ 0.79
CPSF7-225ENST00000545934 GSG1L2A8MUP6 293 aa19.99■□□□□ 0.79
CPSF7-225ENST00000545934 NDUFB10O96000 172 aa19.99■□□□□ 0.79
CPSF7-225ENST00000545934 FOSL2P15408 326 aa19.99■□□□□ 0.79
CPSF7-225ENST00000545934 SNRNP48Q6IEG0 339 aaKnown RBP19.99■□□□□ 0.79
CPSF7-225ENST00000545934 GIMAP6Q6P9H5 292 aa19.99■□□□□ 0.79
CPSF7-225ENST00000545934 NUP133Q8WUM0 1156 aa19.99■□□□□ 0.79
CPSF7-225ENST00000545934 FGD4Q96M96 766 aa19.99■□□□□ 0.79
CPSF7-225ENST00000545934 MYADML2A6NDP7 307 aa19.98■□□□□ 0.79
CPSF7-225ENST00000545934 ADCY6O43306 1168 aa19.98■□□□□ 0.79
CPSF7-225ENST00000545934 DUSP11O75319 330 aaKnown RBP19.98■□□□□ 0.79
CPSF7-225ENST00000545934 CDK7P50613 346 aa19.98■□□□□ 0.79
CPSF7-225ENST00000545934 KCNA10Q16322 511 aa19.98■□□□□ 0.79
CPSF7-225ENST00000545934 PRPF38AQ8NAV1 312 aaKnown RBP19.98■□□□□ 0.79
CPSF7-225ENST00000545934 BCL11AQ9H165 835 aa19.98■□□□□ 0.79
CPSF7-225ENST00000545934 ELP1O95163 1332 aa19.98■□□□□ 0.79
CPSF7-225ENST00000545934 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.97■□□□□ 0.79
CPSF7-225ENST00000545934 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.97■□□□□ 0.79
CPSF7-225ENST00000545934 DCDC2CA8MYV0 355 aa19.97■□□□□ 0.79
CPSF7-225ENST00000545934 RAD21O60216 631 aa19.97■□□□□ 0.79
CPSF7-225ENST00000545934 TIMP1P01033 207 aa19.97■□□□□ 0.79
CPSF7-225ENST00000545934 MKL1Q969V6 931 aa19.97■□□□□ 0.79
CPSF7-225ENST00000545934 DDX11Q96FC9 970 aa19.97■□□□□ 0.79
CPSF7-225ENST00000545934 UPF3AQ9H1J1 476 aaKnown RBP19.97■□□□□ 0.79
CPSF7-225ENST00000545934 SLC38A10Q9HBR0 1119 aa19.97■□□□□ 0.79
CPSF7-225ENST00000545934 DNAJB2P25686 324 aa19.96■□□□□ 0.79
CPSF7-225ENST00000545934 NKX3-2P78367 333 aa19.96■□□□□ 0.79
CPSF7-225ENST00000545934 IRX5P78411 483 aaPredicted RBP19.96■□□□□ 0.79
CPSF7-225ENST00000545934 GRIN2CQ14957 1233 aa19.96■□□□□ 0.79
CPSF7-225ENST00000545934 RASIP1Q5U651 963 aa19.96■□□□□ 0.79
CPSF7-225ENST00000545934 MFSD5Q6N075 450 aa19.96■□□□□ 0.79
CPSF7-225ENST00000545934 LRRCC1Q9C099 1032 aa19.96■□□□□ 0.79
CPSF7-225ENST00000545934 KATNBL1Q9H079 304 aa19.96■□□□□ 0.79
CPSF7-225ENST00000545934 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.96■□□□□ 0.79
CPSF7-225ENST00000545934 SYNPO2Q9UMS6 1093 aa19.96■□□□□ 0.79
CPSF7-225ENST00000545934 MROH7Q68CQ1 1323 aa19.96■□□□□ 0.79
CPSF7-225ENST00000545934 GJA9P57773 515 aa19.95■□□□□ 0.78
CPSF7-225ENST00000545934 ACVR2BQ13705 512 aa19.95■□□□□ 0.78
CPSF7-225ENST00000545934 C16orf59Q7L2K0 433 aa19.95■□□□□ 0.78
CPSF7-225ENST00000545934 MIER1Q8N108 512 aa19.95■□□□□ 0.78
CPSF7-225ENST00000545934 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.95■□□□□ 0.782e-7■■■□□ 19
CPSF7-225ENST00000545934 MKNK2Q9HBH9 465 aa19.95■□□□□ 0.78
CPSF7-225ENST00000545934 EPB41L4AQ9HCS5 686 aaPredicted RBP19.95■□□□□ 0.78
CPSF7-225ENST00000545934 ZHX1Q9UKY1 873 aaPredicted RBP19.95■□□□□ 0.78
CPSF7-225ENST00000545934 CTAGE5O15320 804 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 SMARCA5O60264 1052 aaPredicted RBP19.94■□□□□ 0.78
CPSF7-225ENST00000545934 ASGR1P07306 291 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 OAZ1P54368 228 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 CPXCR1Q8N123 301 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 KBTBD3Q8NAB2 608 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 PCSK9Q8NBP7 692 aaKnown RBP19.94■□□□□ 0.78
CPSF7-225ENST00000545934 APPBP2Q92624 585 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 OSBP2Q969R2 916 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 GLT1D1Q96MS3 346 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 ABHD16BQ9H3Z7 469 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 CHMP4BQ9H444 224 aaKnown RBP19.94■□□□□ 0.78
CPSF7-225ENST00000545934 ECHDC1Q9NTX5 307 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 CLIP2Q9UDT6 1046 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 MUC3AQ02505 3323 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 PLIN4Q96Q06 1357 aa19.94■□□□□ 0.78
CPSF7-225ENST00000545934 MINDY4BA8MYZ0 360 aa19.93■□□□□ 0.78
CPSF7-225ENST00000545934 ZBED4O75132 1171 aa19.93■□□□□ 0.78
CPSF7-225ENST00000545934 CCDC144BQ3MJ40 725 aa19.93■□□□□ 0.78
CPSF7-225ENST00000545934 USP38Q8NB14 1042 aa19.93■□□□□ 0.78
CPSF7-225ENST00000545934 GMCL1P1Q8NEA9 526 aa19.93■□□□□ 0.78
CPSF7-225ENST00000545934 CHST13Q8NET6 341 aa19.93■□□□□ 0.78
CPSF7-225ENST00000545934 RAVER2Q9HCJ3 691 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms