RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.55■□□□□ 0.56
PRPF40A-212ENST00000545856 ORC3Q9UBD5 711 aaPredicted RBP18.55■□□□□ 0.56
PRPF40A-212ENST00000545856 PNMA3Q9UL41 463 aa18.55■□□□□ 0.56
PRPF40A-212ENST00000545856 AGTPBP1Q9UPW5 1226 aa18.55■□□□□ 0.56
PRPF40A-212ENST00000545856 MANSC4A6NHS7 340 aaPredicted RBP18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 TMEM232C9JQI7 657 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 RAD21O60216 631 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 PLEKHA8P1O95397 391 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 APLP1P51693 650 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 FAM83BQ5T0W9 1011 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 SYDE2Q5VT97 1194 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 PPP1R18Q6NYC8 613 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 CCDC84Q86UT8 332 aaPredicted RBP18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 STAG2Q8N3U4 1231 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 CCDC12Q8WUD4 166 aaPredicted RBP18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 SLF1Q9BQI6 1058 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 MAF1Q9H063 256 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 SH3GLB2Q9NR46 395 aa18.54■□□□□ 0.56
PRPF40A-212ENST00000545856 TESPA1A2RU30 521 aaPredicted RBP18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 SLC10A3P09131 477 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 GJB2P29033 226 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 ZNF157P51786 506 aaPredicted RBP18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 PFKFB3Q16875 520 aaPredicted RBP18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 LBX2Q6XYB7 198 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 CATSPERGQ6ZRH7 1159 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 KCTD1Q719H9 257 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 RAB11FIP4Q86YS3 637 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 RASAL3Q86YV0 1011 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 SPICE1Q8N0Z3 855 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 MB21D1Q8N884 522 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 SLC26A6Q9BXS9 759 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 RPAP3Q9H6T3 665 aaPredicted RBP18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 HOXC10Q9NYD6 342 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 PPP1R9AQ9ULJ8 1098 aa18.53■□□□□ 0.56
PRPF40A-212ENST00000545856 PNMA6FA0A0J9YX94 578 aa18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 ZBTB5O15062 677 aa18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 GOLGA8HP0CJ92 632 aa18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 OAZ1P54368 228 aa18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 IKQ13123 557 aaPredicted RBP18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 COG2Q14746 738 aa18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 ZYXQ15942 572 aaKnown RBP18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 CCDC148Q8NFR7 591 aa18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 TANGO6Q9C0B7 1094 aa18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 GLT8D2Q9H1C3 349 aa18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 GPCPD1Q9NPB8 672 aa18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 MTMR7Q9Y216 660 aa18.52■□□□□ 0.55
PRPF40A-212ENST00000545856 FRMPD2Q68DX3 1309 aaPredicted RBP18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 RBBP6Q7Z6E9 1792 aaKnown RBP18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 RASSF10A6NK89 507 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 CYTH3O43739 400 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 SCG2P13521 617 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 NUCB2P80303 420 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 KIAA1755Q5JYT7 1200 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 GALNT17Q6IS24 598 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 ANKRD23Q86SG2 305 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 ADGRF4Q8IZF3 695 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 MS4A4AQ96JQ5 239 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 RANBP17Q9H2T7 1088 aaKnown RBP18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 JMJD4Q9H9V9 463 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 PRR12Q9ULL5 1215 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 ISY1Q9ULR0 285 aaKnown RBP18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 ABT1Q9ULW3 272 aaKnown RBP18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 ADAMTS5Q9UNA0 930 aa18.51■□□□□ 0.55
PRPF40A-212ENST00000545856 COL11A1P12107 1806 aaPredicted RBP18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 ATP2A1O14983 1001 aa18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 JAK2O60674 1132 aa18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 FLOT1O75955 427 aa18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 FDPSP14324 419 aaKnown RBP18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 OSBPP22059 807 aa18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 GJA5P36382 358 aa18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 SREBF2Q12772 1141 aa18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 TRIM29Q14134 588 aa18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 PHKBQ93100 1093 aa18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 V9GY48 417 aaPredicted RBP18.5■□□□□ 0.55
PRPF40A-212ENST00000545856 ESYT2A0FGR8 921 aa18.49■□□□□ 0.55
PRPF40A-212ENST00000545856 DSG3P32926 999 aa18.49■□□□□ 0.55
PRPF40A-212ENST00000545856 DDIT3P35638 169 aa18.49■□□□□ 0.55
PRPF40A-212ENST00000545856 MOGSQ13724 837 aa18.49■□□□□ 0.55
PRPF40A-212ENST00000545856 NUP88Q99567 741 aaPredicted RBP18.49■□□□□ 0.55
PRPF40A-212ENST00000545856 AMNQ9BXJ7 453 aa18.49■□□□□ 0.55
PRPF40A-212ENST00000545856 SLC38A10Q9HBR0 1119 aa18.49■□□□□ 0.55
PRPF40A-212ENST00000545856 BARHL2Q9NY43 387 aa18.49■□□□□ 0.55
PRPF40A-212ENST00000545856 CCL15-CCL14A0A0B4J2E2 113 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 ZBED4O75132 1171 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 CALML3P27482 149 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 COPB2P35606 906 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 IRX3P78415 501 aaPredicted RBP18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 NOGQ13253 232 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 PKN1Q16512 942 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 CDC37Q16543 378 aaPredicted RBP18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 CCL15Q16663 113 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 LARP1BQ659C4 914 aaKnown RBP18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 OTUD7BQ6GQQ9 843 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 TTBK2Q6IQ55 1244 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 GADL1Q6ZQY3 521 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 RASGRP2Q7LDG7 609 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 SAMD3Q8N6K7 520 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 C8orf76Q96K31 380 aa18.48■□□□□ 0.55
PRPF40A-212ENST00000545856 ALG1Q9BT22 464 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms