RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 C10orf67Q8IYJ2 551 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 SYMPKQ92797 1274 aaKnown RBP13.83□□□□□ -0.2
COL4A6-209ENST00000545689 BTBD18B2RXH4 712 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 ADD2P35612 726 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 LGSNQ5TDP6 509 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 APOA5Q6Q788 366 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 GBP6Q6ZN66 633 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 GAS2L3Q86XJ1 694 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 KLHL7Q8IXQ5 586 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 ASIC3Q9UHC3 531 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 FOSP01100 380 aaPredicted RBP13.82□□□□□ -0.2
COL4A6-209ENST00000545689 BCAMP50895 628 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 TMED8Q6PL24 325 aaPredicted RBP13.82□□□□□ -0.2
COL4A6-209ENST00000545689 GRK7Q8WTQ7 553 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
COL4A6-209ENST00000545689 PHLPP2Q6ZVD8 1323 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 GAS7O60861 476 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 MFSD14BQ5SR56 506 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 RAB3IL1Q8TBN0 382 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 RUNDC3BQ96NL0 473 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 PANK4Q9NVE7 773 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 SPHKAPQ2M3C7 1700 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 KLRF2D3W0D1 207 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 COPB1P53618 953 aaKnown RBP13.82□□□□□ -0.2
COL4A6-209ENST00000545689 MRPL11Q9Y3B7 192 aaKnown RBP13.82□□□□□ -0.2
COL4A6-209ENST00000545689 BZW2Q9Y6E2 419 aaKnown RBP13.82□□□□□ -0.2
COL4A6-209ENST00000545689 E7EVH7 732 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 TMC4Q7Z404 712 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 SLC17A8Q8NDX2 589 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 FLAD1Q8NFF5 587 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 STMN2Q93045 179 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 M0R2C6 588 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 LONRF3Q496Y0 759 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 DENND2CQ68D51 928 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 FAM184BQ9ULE4 1060 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 PCDHA4Q9UN74 947 aa13.82□□□□□ -0.2
COL4A6-209ENST00000545689 RABGGTAQ92696 567 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 GREM2Q9H772 168 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 TBC1D7Q9P0N9 293 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 ARMCX3Q9UH62 379 aaPredicted RBP13.81□□□□□ -0.2
COL4A6-209ENST00000545689 PCDHA12Q9UN75 941 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 hCG_1642624A0A1W2PR95 340 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 KIF23Q02241 960 aaPredicted RBP13.81□□□□□ -0.2
COL4A6-209ENST00000545689 PROSER3Q2NL68 480 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 MIER3Q7Z3K6 550 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 KRT26Q7Z3Y9 468 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 STAMQ92783 540 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 P3H4Q92791 437 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 AZI2Q9H6S1 392 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 DDX25Q9UHL0 483 aaKnown RBP13.81□□□□□ -0.2
COL4A6-209ENST00000545689 COL4A3BPQ9Y5P4 624 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 MYCLP12524 364 aaPredicted RBP13.81□□□□□ -0.2
COL4A6-209ENST00000545689 SP4Q02446 784 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 ASPRV1Q53RT3 343 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 CCDC105Q8IYK2 499 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 TLR7Q9NYK1 1049 aaKnown RBP13.81□□□□□ -0.2
COL4A6-209ENST00000545689 ERVV-1B6SEH8 477 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 TECP42680 631 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 GYG1P46976 350 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 LONRF2Q1L5Z9 754 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 USH1GQ495M9 461 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 PPP1R13BQ96KQ4 1090 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 ARHGAP24Q8N264 748 aa13.81□□□□□ -0.2
COL4A6-209ENST00000545689 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL4A6-209ENST00000545689 SOS2Q07890 1332 aaPredicted RBP13.8□□□□□ -0.2
COL4A6-209ENST00000545689 CFBP00751 764 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 GLI2P10070 1586 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 PTGDRQ13258 359 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 SDR42E1Q8WUS8 393 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 KIFC2Q96AC6 838 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 SETBP1Q9Y6X0 1596 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 SH2B2O14492 632 aaPredicted RBP13.8□□□□□ -0.2
COL4A6-209ENST00000545689 P4HA1P13674 534 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 MCF2L2Q86YR7 1114 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 LINC00301Q8NCQ3 95 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 FAM71BQ8TC56 605 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 PHKA1P46020 1223 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 BRDTQ58F21 947 aaPredicted RBP13.8□□□□□ -0.2
COL4A6-209ENST00000545689 ZNF589Q86UQ0 364 aaPredicted RBP13.8□□□□□ -0.2
COL4A6-209ENST00000545689 HEG1Q9ULI3 1381 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 DCUN1D2Q6PH85 259 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 PI4K2BQ8TCG2 481 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 CLIC6Q96NY7 704 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 AS3MTQ9HBK9 375 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 BTDP43251 543 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 CCDC17Q96LX7 622 aa13.8□□□□□ -0.2
COL4A6-209ENST00000545689 EPN1Q9Y6I3 576 aaPredicted RBP13.8□□□□□ -0.2
COL4A6-209ENST00000545689 MMP1P03956 469 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 POLR2MP0CAP2 368 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 RNASE9P60153 205 aaKnown RBP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 LRMPQ12912 555 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 PAXIP1Q6ZW49 1069 aaPredicted RBP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 U2AF1L4Q8WU68 220 aaKnown RBP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 NLRC4Q9NPP4 1024 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 NOP56O00567 594 aaKnown RBP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 GCFC2P16383 781 aaKnown RBP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 ITIH3Q06033 890 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 RESTQ13127 1097 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms