RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 MSCO60682 206 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 ZKSCAN1P17029 563 aaPredicted RBP8.66□□□□□ -1.02
LDHA-223ENST00000545215 INPP5BP32019 993 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 TNNI2P48788 182 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 ZP2Q05996 745 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 LINC01559Q495D7 138 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 GJC2Q5T442 439 aaPredicted RBP8.66□□□□□ -1.02
LDHA-223ENST00000545215 TRIM67Q6ZTA4 783 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 ARRDC4Q8NCT1 418 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 CHAMP1Q96JM3 812 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 PRIMPOLQ96LW4 560 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 PRKAG3Q9UGI9 489 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 EGFL7Q9UHF1 273 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 DDX20Q9UHI6 824 aaKnown RBP8.66□□□□□ -1.02
LDHA-223ENST00000545215 KNSTRNQ9Y448 316 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 VPS13AQ96RL7 3174 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 GBF1Q92538 1859 aa8.66□□□□□ -1.02
LDHA-223ENST00000545215 A0A0G2JLL6 359 aaPredicted RBP8.65□□□□□ -1.02
LDHA-223ENST00000545215 AVPR2P30518 371 aa8.65□□□□□ -1.02
LDHA-223ENST00000545215 RBM5P52756 815 aaKnown RBP eCLIP8.65□□□□□ -1.02
LDHA-223ENST00000545215 MARSP56192 900 aaKnown RBP8.65□□□□□ -1.02
LDHA-223ENST00000545215 PPIGQ13427 754 aaKnown RBP eCLIP8.65□□□□□ -1.02
LDHA-223ENST00000545215 AGERQ15109 404 aa8.65□□□□□ -1.02
LDHA-223ENST00000545215 NBPF20Q3BBV1 942 aa8.65□□□□□ -1.02
LDHA-223ENST00000545215 HSP90AB3PQ58FF7 597 aa8.65□□□□□ -1.02
LDHA-223ENST00000545215 ZNF365Q70YC5 407 aa8.65□□□□□ -1.02
LDHA-223ENST00000545215 PRRT2Q7Z6L0 340 aaPredicted RBP8.65□□□□□ -1.02
LDHA-223ENST00000545215 TXNRD3Q86VQ6 643 aa8.65□□□□□ -1.02
LDHA-223ENST00000545215 KCTD12Q96CX2 325 aaKnown RBP8.65□□□□□ -1.02
LDHA-223ENST00000545215 TDRD3Q9H7E2 651 aaKnown RBP8.65□□□□□ -1.02
LDHA-223ENST00000545215 SEC31BQ9NQW1 1179 aa8.65□□□□□ -1.02
LDHA-223ENST00000545215 TMEM39AQ9NV64 488 aa8.65□□□□□ -1.02
LDHA-223ENST00000545215 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.02
LDHA-223ENST00000545215 PCDHA11Q9Y5I1 949 aa8.65□□□□□ -1.02
LDHA-223ENST00000545215 EPOPA6NHQ4 379 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 CYSRT1A8MQ03 144 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 KBTBD13C9JR72 458 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 F8W031 263 aaPredicted RBP8.64□□□□□ -1.03
LDHA-223ENST00000545215 TIMP1P01033 207 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 MYOGP15173 224 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 VCPP55072 806 aaKnown RBP8.64□□□□□ -1.03
LDHA-223ENST00000545215 USP4Q13107 963 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 MFSD5Q6N075 450 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 SLC44A5Q8NCS7 719 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 GAS2L2Q8NHY3 880 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 USP6NLQ92738 828 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 HOOK2Q96ED9 719 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 MUTYHQ9UIF7 546 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 PCDHB11Q9Y5F2 797 aa8.64□□□□□ -1.03
LDHA-223ENST00000545215 POTEMA6NI47 508 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 KCNA5P22460 613 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 ADCYAP1R1P41586 468 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 RABGGTBP53611 331 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 CCL14Q16627 93 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 MCTP2Q6DN12 878 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 PSRC1Q6PGN9 363 aaPredicted RBP8.63□□□□□ -1.03
LDHA-223ENST00000545215 LRP10Q7Z4F1 713 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 SOCS4Q8WXH5 440 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 FAM89AQ96GI7 184 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 ZNF112Q9UJU3 913 aa8.63□□□□□ -1.03
LDHA-223ENST00000545215 CDV3Q9UKY7 258 aaKnown RBP8.63□□□□□ -1.03
LDHA-223ENST00000545215 FCF1Q9Y324 198 aaKnown RBP8.63□□□□□ -1.03
LDHA-223ENST00000545215 S1PR4O95977 384 aa8.62□□□□□ -1.03
LDHA-223ENST00000545215 GCLCP48506 637 aaPredicted RBP8.62□□□□□ -1.03
LDHA-223ENST00000545215 SH3BP2P78314 561 aa8.62□□□□□ -1.03
LDHA-223ENST00000545215 FAAP100Q0VG06 881 aa8.62□□□□□ -1.03
LDHA-223ENST00000545215 DCAF15Q66K64 600 aa8.62□□□□□ -1.03
LDHA-223ENST00000545215 GADL1Q6ZQY3 521 aa8.62□□□□□ -1.03
LDHA-223ENST00000545215 FRMD5Q7Z6J6 570 aa8.62□□□□□ -1.03
LDHA-223ENST00000545215 ADHFE1Q8IWW8 467 aa8.62□□□□□ -1.03
LDHA-223ENST00000545215 ZNF341Q9BYN7 854 aa8.62□□□□□ -1.03
LDHA-223ENST00000545215 M0R2N6 131 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 ACRP10323 421 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 WEE1P30291 646 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 CCT4P50991 539 aaKnown RBP8.61□□□□□ -1.03
LDHA-223ENST00000545215 FKBP1AP62942 108 aaKnown RBP8.61□□□□□ -1.03
LDHA-223ENST00000545215 DDX10Q13206 875 aaKnown RBP8.61□□□□□ -1.03
LDHA-223ENST00000545215 NOL9Q5SY16 702 aaKnown RBP8.61□□□□□ -1.03
LDHA-223ENST00000545215 KIAA2013Q8IYS2 634 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 FERMT2Q96AC1 680 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 CERS4Q9HA82 394 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 LMCD1Q9NZU5 365 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 BRWD1Q9NSI6 2320 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 UTYO14607 1347 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 ZNF536O15090 1300 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 NAV2Q8IVL1 2488 aa8.61□□□□□ -1.03
LDHA-223ENST00000545215 LPXNO60711 386 aa8.6□□□□□ -1.03
LDHA-223ENST00000545215 ICMTO60725 284 aa8.6□□□□□ -1.03
LDHA-223ENST00000545215 CSF2RAP15509 400 aa8.6□□□□□ -1.03
LDHA-223ENST00000545215 CNGA1P29973 690 aa8.6□□□□□ -1.03
LDHA-223ENST00000545215 GRB10Q13322 594 aa8.6□□□□□ -1.03
LDHA-223ENST00000545215 MIGA2Q7L4E1 593 aa8.6□□□□□ -1.03
LDHA-223ENST00000545215 NPAS4Q8IUM7 802 aa8.6□□□□□ -1.03
LDHA-223ENST00000545215 DZIP1LQ8IYY4 767 aaKnown RBP8.6□□□□□ -1.03
LDHA-223ENST00000545215 TOX2Q96NM4 488 aa8.6□□□□□ -1.03
LDHA-223ENST00000545215 MTIF3Q9H2K0 278 aaKnown RBP8.6□□□□□ -1.03
LDHA-223ENST00000545215 KIAA1522Q9P206 1035 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms