RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 CTDP1Q9Y5B0 961 aaPredicted RBP16.84■□□□□ 0.29
DDX11-228ENST00000545115 PLIN4Q96Q06 1357 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 LTBP2Q14767 1821 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 ZBED4O75132 1171 aa16.83■□□□□ 0.28
DDX11-228ENST00000545115 TTLL1O95922 423 aa16.83■□□□□ 0.28
DDX11-228ENST00000545115 ZNF865P0CJ78 1059 aaPredicted RBP16.83■□□□□ 0.28
DDX11-228ENST00000545115 AKR1A1P14550 325 aa16.83■□□□□ 0.28
DDX11-228ENST00000545115 TAL1P17542 331 aaPredicted RBP16.83■□□□□ 0.28
DDX11-228ENST00000545115 DDX11Q96FC9 970 aa16.83■□□□□ 0.28
DDX11-228ENST00000545115 FSD1Q9BTV5 496 aa16.83■□□□□ 0.28
DDX11-228ENST00000545115 PDLIM7Q9NR12 457 aa16.83■□□□□ 0.28
DDX11-228ENST00000545115 PLXNA1Q9UIW2 1896 aa16.83■□□□□ 0.28
DDX11-228ENST00000545115 STXBP5LQ9Y2K9 1186 aa16.83■□□□□ 0.28
DDX11-228ENST00000545115 SYNGAP1Q96PV0 1343 aa16.82■□□□□ 0.28
DDX11-228ENST00000545115 PGK1P00558 417 aa16.82■□□□□ 0.28
DDX11-228ENST00000545115 PDE4BQ07343 736 aa16.82■□□□□ 0.28
DDX11-228ENST00000545115 CPXCR1Q8N123 301 aa16.82■□□□□ 0.28
DDX11-228ENST00000545115 GMCL1P1Q8NEA9 526 aa16.82■□□□□ 0.28
DDX11-228ENST00000545115 KIFC2Q96AC6 838 aa16.82■□□□□ 0.28
DDX11-228ENST00000545115 SEC62Q99442 399 aaKnown RBP16.82■□□□□ 0.28
DDX11-228ENST00000545115 NAPBQ9H115 298 aa16.82■□□□□ 0.28
DDX11-228ENST00000545115 FEM1BQ9UK73 627 aa16.82■□□□□ 0.28
DDX11-228ENST00000545115 RIPK3Q9Y572 518 aa16.82■□□□□ 0.28
DDX11-228ENST00000545115 PCDHB15Q9Y5E8 787 aa16.82■□□□□ 0.28
DDX11-228ENST00000545115 MYH4Q9Y623 1939 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 DNAJC25-GNG10A0A024R161 153 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 SLC3A2P08195 630 aaKnown RBP16.81■□□□□ 0.28
DDX11-228ENST00000545115 TSPY3P0CV98 308 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 TSPY8P0CW00 308 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 ZMYM1Q5SVZ6 1142 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 FAM109BQ6ICB4 259 aaPredicted RBP16.81■□□□□ 0.28
DDX11-228ENST00000545115 MAMDC4Q6UXC1 1216 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.81■□□□□ 0.28
DDX11-228ENST00000545115 LRRC47Q8N1G4 583 aaKnown RBP16.81■□□□□ 0.28
DDX11-228ENST00000545115 NEDD1Q8NHV4 660 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 OTUD7AQ8TE49 926 aaPredicted RBP16.81■□□□□ 0.28
DDX11-228ENST00000545115 SLC38A10Q9HBR0 1119 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 RAVER2Q9HCJ3 691 aaKnown RBP16.81■□□□□ 0.28
DDX11-228ENST00000545115 FBXO40Q9UH90 709 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 DNAH12Q6ZR08 3092 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 COL6A3P12111 3177 aa16.81■□□□□ 0.28
DDX11-228ENST00000545115 A0A1W2PQ45 241 aaPredicted RBP16.8■□□□□ 0.28
DDX11-228ENST00000545115 A0A1W2PQY0 241 aa16.8■□□□□ 0.28
DDX11-228ENST00000545115 POTEB2H3BUK9 544 aa16.8■□□□□ 0.28
DDX11-228ENST00000545115 ADAMTS4O75173 837 aa16.8■□□□□ 0.28
DDX11-228ENST00000545115 MX1P20591 662 aa16.8■□□□□ 0.28
DDX11-228ENST00000545115 SLC4A3P48751 1232 aa16.8■□□□□ 0.28
DDX11-228ENST00000545115 OAZ1P54368 228 aa16.8■□□□□ 0.28
DDX11-228ENST00000545115 PPARAQ07869 468 aa16.8■□□□□ 0.28
DDX11-228ENST00000545115 ZNF467Q7Z7K2 595 aaPredicted RBP16.8■□□□□ 0.28
DDX11-228ENST00000545115 BADQ92934 168 aa16.8■□□□□ 0.28
DDX11-228ENST00000545115 LENG1Q96BZ8 264 aaPredicted RBP16.8■□□□□ 0.28
DDX11-228ENST00000545115 FAM184BQ9ULE4 1060 aa16.8■□□□□ 0.28
DDX11-228ENST00000545115 SMCHD1A6NHR9 2005 aa16.8■□□□□ 0.28
DDX11-228ENST00000545115 TRIM43BA6NCK2 446 aa16.79■□□□□ 0.28
DDX11-228ENST00000545115 SNAI1O95863 264 aaPredicted RBP16.79■□□□□ 0.28
DDX11-228ENST00000545115 BMP3P12645 472 aa16.79■□□□□ 0.28
DDX11-228ENST00000545115 TLE2Q04725 743 aa16.79■□□□□ 0.28
DDX11-228ENST00000545115 SLFN13Q68D06 897 aa16.79■□□□□ 0.28
DDX11-228ENST00000545115 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
DDX11-228ENST00000545115 ANKRD35Q8N283 1001 aa16.79■□□□□ 0.28
DDX11-228ENST00000545115 CHST13Q8NET6 341 aa16.79■□□□□ 0.28
DDX11-228ENST00000545115 TRIM43Q96BQ3 446 aaPredicted RBP16.79■□□□□ 0.28
DDX11-228ENST00000545115 TSEN34Q9BSV6 310 aaKnown RBP16.79■□□□□ 0.28
DDX11-228ENST00000545115 ZHX1Q9UKY1 873 aaPredicted RBP16.79■□□□□ 0.28
DDX11-228ENST00000545115 TACC3Q9Y6A5 838 aa16.79■□□□□ 0.28
DDX11-228ENST00000545115 SYNRGQ9UMZ2 1314 aa16.78■□□□□ 0.28
DDX11-228ENST00000545115 CLTBP09497 229 aa16.78■□□□□ 0.28
DDX11-228ENST00000545115 FDX1P10109 184 aa16.78■□□□□ 0.28
DDX11-228ENST00000545115 STAT2P52630 851 aa16.78■□□□□ 0.28
DDX11-228ENST00000545115 TFAP4Q01664 338 aa16.78■□□□□ 0.28
DDX11-228ENST00000545115 SHHQ15465 462 aa16.78■□□□□ 0.28
DDX11-228ENST00000545115 PPP4R3BQ5MIZ7 849 aa16.78■□□□□ 0.28
DDX11-228ENST00000545115 ISY1Q9ULR0 285 aaKnown RBP16.78■□□□□ 0.28
DDX11-228ENST00000545115 SALL3Q9BXA9 1300 aa16.77■□□□□ 0.28
DDX11-228ENST00000545115 MOXD2PA6NHM9 499 aa16.77■□□□□ 0.28
DDX11-228ENST00000545115 TMEM232C9JQI7 657 aa16.77■□□□□ 0.28
DDX11-228ENST00000545115 C9orf50Q5SZB4 431 aa16.77■□□□□ 0.28
DDX11-228ENST00000545115 ZNF697Q5TEC3 545 aa16.77■□□□□ 0.28
DDX11-228ENST00000545115 NUP133Q8WUM0 1156 aa16.77■□□□□ 0.28
DDX11-228ENST00000545115 GMCL1Q96IK5 515 aa16.77■□□□□ 0.28
DDX11-228ENST00000545115 ABHD16BQ9H3Z7 469 aa16.77■□□□□ 0.28
DDX11-228ENST00000545115 STARD7Q9NQZ5 370 aa16.77■□□□□ 0.28
DDX11-228ENST00000545115 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.77■□□□□ 0.28
DDX11-228ENST00000545115 ZBTB47Q9UFB7 747 aaPredicted RBP16.77■□□□□ 0.28
DDX11-228ENST00000545115 TSPY2A6NKD2 308 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 DLL1O00548 723 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 PQBP1O60828 265 aaKnown RBP16.76■□□□□ 0.27
DDX11-228ENST00000545115 DUSP11O75319 330 aaKnown RBP16.76■□□□□ 0.27
DDX11-228ENST00000545115 SLC1A4P43007 532 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 ACLYP53396 1101 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 IKQ13123 557 aaPredicted RBP16.76■□□□□ 0.27
DDX11-228ENST00000545115 ACVR2BQ13705 512 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 ARMCX2Q7L311 632 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 FAM160B2Q86V87 743 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 KLHDC9Q8NEP7 349 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 CHURC1Q8WUH1 139 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 FGD4Q96M96 766 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 ACAD9Q9H845 621 aa16.76■□□□□ 0.27
DDX11-228ENST00000545115 HOMER2Q9NSB8 354 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms