RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PARP14Q460N5 1801 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 NAV1Q8NEY1 1877 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 ELP1O95163 1332 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 UMODL1Q5DID0 1318 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 ARVCFO00192 962 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 APBB1O00213 710 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 VWA5AO00534 786 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 SURF6O75683 361 aaKnown RBP11.4□□□□□ -0.58
CHD4-212ENST00000545083 BCAR3O75815 825 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 ASGR1P07306 291 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 MYOGP15173 224 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 CST5P28325 142 aaPredicted RBP11.4□□□□□ -0.58
CHD4-212ENST00000545083 RABGGTBP53611 331 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 ICA1Q05084 483 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 SDR42E1Q8WUS8 393 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 GLT1D1Q96MS3 346 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 LRFN3Q9BTN0 628 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 SLC28A3Q9HAS3 691 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 IL23AQ9NPF7 189 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.58
CHD4-212ENST00000545083 FAM184BQ9ULE4 1060 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 MUC6Q6W4X9 2439 aa11.4□□□□□ -0.58
CHD4-212ENST00000545083 COL11A1P12107 1806 aaPredicted RBP11.39□□□□□ -0.59
CHD4-212ENST00000545083 MROH7Q68CQ1 1323 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 PRRC2BQ5JSZ5 2229 aaKnown RBP11.39□□□□□ -0.59
CHD4-212ENST00000545083 MAGEB6P1A0A0J9YX57 407 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 TRANK1O15050 2925 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 CTAGE5O15320 804 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 DUSP11O75319 330 aaKnown RBP11.39□□□□□ -0.59
CHD4-212ENST00000545083 CD4P01730 458 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
CHD4-212ENST00000545083 OTOP2Q7RTS6 562 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 LCORLQ8N3X6 602 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 CLUAP1Q96AJ1 413 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 VTI1AQ96AJ9 217 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 CRNKL1Q9BZJ0 848 aaKnown RBP11.39□□□□□ -0.59
CHD4-212ENST00000545083 ARHGEF10LQ9HCE6 1279 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 DCP1AQ9NPI6 582 aaPredicted RBP11.39□□□□□ -0.59
CHD4-212ENST00000545083 PPP1R9AQ9ULJ8 1098 aa11.39□□□□□ -0.59
CHD4-212ENST00000545083 DNAJC25-GNG10A0A024R161 153 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 CYP2D7A0A087X1C5 515 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 A0A0U1RQG5 324 aaPredicted RBP11.38□□□□□ -0.59
CHD4-212ENST00000545083 FGBP02675 491 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 PDE6AP16499 860 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 GJA9P57773 515 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 MAMDC4Q6UXC1 1216 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 MSL3Q8N5Y2 521 aaKnown RBP11.38□□□□□ -0.59
CHD4-212ENST00000545083 KHSRPQ92945 711 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHD4-212ENST00000545083 VWCEQ96DN2 955 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 FGD4Q96M96 766 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 UPF3AQ9H1J1 476 aaKnown RBP11.38□□□□□ -0.59
CHD4-212ENST00000545083 SH2D4AQ9H788 454 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 C1orf115Q9H7X2 142 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 NOP58Q9Y2X3 529 aaKnown RBP11.38□□□□□ -0.59
CHD4-212ENST00000545083 RIPK3Q9Y572 518 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 GBF1Q92538 1859 aa11.38□□□□□ -0.59
CHD4-212ENST00000545083 RFXAPO00287 272 aa11.37□□□□□ -0.59
CHD4-212ENST00000545083 ERC2O15083 957 aa11.37□□□□□ -0.59
CHD4-212ENST00000545083 PRKAB2O43741 272 aa11.37□□□□□ -0.59
CHD4-212ENST00000545083 EEF2P13639 858 aaKnown RBP11.37□□□□□ -0.59
CHD4-212ENST00000545083 ACVR2BQ13705 512 aa11.37□□□□□ -0.59
CHD4-212ENST00000545083 CCDC144BQ3MJ40 725 aa11.37□□□□□ -0.59
CHD4-212ENST00000545083 FAM83BQ5T0W9 1011 aa11.37□□□□□ -0.59
CHD4-212ENST00000545083 PPP2R2DQ66LE6 453 aa11.37□□□□□ -0.59
CHD4-212ENST00000545083 TMED8Q6PL24 325 aaPredicted RBP11.37□□□□□ -0.59
CHD4-212ENST00000545083 PCSK9Q8NBP7 692 aaKnown RBP11.37□□□□□ -0.59
CHD4-212ENST00000545083 TSPYL2Q9H2G4 693 aaPredicted RBP11.37□□□□□ -0.59
CHD4-212ENST00000545083 C11orf16Q9NQ32 467 aa11.37□□□□□ -0.59
CHD4-212ENST00000545083 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.37□□□□□ -0.59
CHD4-212ENST00000545083 ARIH1Q9Y4X5 557 aaPredicted RBP11.37□□□□□ -0.59
CHD4-212ENST00000545083 ZNF532Q9HCE3 1301 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 TCRBV5S4A2TA0A5A2 114 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 TLR3O15455 904 aaKnown RBP11.36□□□□□ -0.59
CHD4-212ENST00000545083 PTGS1P23219 599 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 COPB2P35606 906 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 CDK8P49336 464 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 CCL23P55773 120 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 BEX3Q00994 111 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 SKIV2LQ15477 1246 aaKnown RBP11.36□□□□□ -0.59
CHD4-212ENST00000545083 SLFNL1Q499Z3 407 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 GNASQ5JWF2 1037 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 SLC9C2Q5TAH2 1124 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 KRT40Q6A162 431 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 SNRNP48Q6IEG0 339 aaKnown RBP11.36□□□□□ -0.59
CHD4-212ENST00000545083 TMEM57Q8N5G2 664 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 SLC43A3Q8NBI5 491 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 DDX11Q96FC9 970 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 NUP88Q99567 741 aaPredicted RBP11.36□□□□□ -0.59
CHD4-212ENST00000545083 TEX13BQ9BXU2 312 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 KATNBL1Q9H079 304 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 WNT8AQ9H1J5 351 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 HIPK3Q9H422 1215 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 ARMT1Q9H993 441 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 HCN4Q9Y3Q4 1203 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 MTCH2Q9Y6C9 303 aa11.36□□□□□ -0.59
CHD4-212ENST00000545083 ASTN1O14525 1302 aa11.35□□□□□ -0.59
CHD4-212ENST00000545083 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
CHD4-212ENST00000545083 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms