RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 LAMA4Q16363 1823 aa20.02■□□□□ 0.79
HOXD8-204ENST00000544999 ATP2A1O14983 1001 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 NMT2O60551 498 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 COBLO75128 1261 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 ZBED4O75132 1171 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 IGHA2P01877 340 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 CCND3P30281 292 aaPredicted RBP20.01■□□□□ 0.79
HOXD8-204ENST00000544999 OLFML2BQ68BL8 750 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 KIFC2Q96AC6 838 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 MMP19Q99542 508 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 HTATIP2Q9BUP3 242 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 DSCC1Q9BVC3 393 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 TEX13BQ9BXU2 312 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 RNF41Q9H4P4 317 aaPredicted RBP20.01■□□□□ 0.79
HOXD8-204ENST00000544999 TCP11L1Q9NUJ3 509 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 OGDHLQ9ULD0 1010 aa20.01■□□□□ 0.79
HOXD8-204ENST00000544999 CTDP1Q9Y5B0 961 aaPredicted RBP20.01■□□□□ 0.79
HOXD8-204ENST00000544999 FDX1P10109 184 aa20■□□□□ 0.79
HOXD8-204ENST00000544999 SLC1A4P43007 532 aa20■□□□□ 0.79
HOXD8-204ENST00000544999 MFSD6Q6ZSS7 791 aa20■□□□□ 0.79
HOXD8-204ENST00000544999 FAM160B2Q86V87 743 aa20■□□□□ 0.79
HOXD8-204ENST00000544999 TBC1D10CQ8IV04 446 aa20■□□□□ 0.79
HOXD8-204ENST00000544999 NBPF3Q9H094 633 aa20■□□□□ 0.79
HOXD8-204ENST00000544999 SLC38A10Q9HBR0 1119 aa20■□□□□ 0.79
HOXD8-204ENST00000544999 TMEM232C9JQI7 657 aa19.99■□□□□ 0.79
HOXD8-204ENST00000544999 ZNF213O14771 459 aa19.99■□□□□ 0.79
HOXD8-204ENST00000544999 NT5C2P49902 561 aa19.99■□□□□ 0.79
HOXD8-204ENST00000544999 STAT2P52630 851 aa19.99■□□□□ 0.79
HOXD8-204ENST00000544999 SNRNP48Q6IEG0 339 aaKnown RBP19.99■□□□□ 0.79
HOXD8-204ENST00000544999 CHURC1Q8WUH1 139 aa19.99■□□□□ 0.79
HOXD8-204ENST00000544999 RAD50Q92878 1312 aa19.99■□□□□ 0.79
HOXD8-204ENST00000544999 PLA2G6O60733 806 aa19.98■□□□□ 0.79
HOXD8-204ENST00000544999 MCCP23508 829 aa19.98■□□□□ 0.79
HOXD8-204ENST00000544999 CYP2C19P33261 490 aa19.98■□□□□ 0.79
HOXD8-204ENST00000544999 OAZ1P54368 228 aa19.98■□□□□ 0.79
HOXD8-204ENST00000544999 KCTD2Q14681 263 aa19.98■□□□□ 0.79
HOXD8-204ENST00000544999 ISY1Q9ULR0 285 aaKnown RBP19.98■□□□□ 0.79
HOXD8-204ENST00000544999 TOP1P11387 765 aaKnown RBP19.97■□□□□ 0.79
HOXD8-204ENST00000544999 LHX8Q68G74 356 aa19.97■□□□□ 0.79
HOXD8-204ENST00000544999 RCSD1Q6JBY9 416 aa19.97■□□□□ 0.79
HOXD8-204ENST00000544999 NECAB2Q7Z6G3 386 aa19.97■□□□□ 0.79
HOXD8-204ENST00000544999 CPXCR1Q8N123 301 aa19.97■□□□□ 0.79
HOXD8-204ENST00000544999 DCAF4Q8WV16 495 aa19.97■□□□□ 0.79
HOXD8-204ENST00000544999 ESR2Q92731 530 aa19.97■□□□□ 0.79
HOXD8-204ENST00000544999 DPF3Q92784 378 aa19.97■□□□□ 0.79
HOXD8-204ENST00000544999 PAWRQ96IZ0 340 aaKnown RBP19.97■□□□□ 0.79
HOXD8-204ENST00000544999 MAML3Q96JK9 1138 aa19.97■□□□□ 0.79
HOXD8-204ENST00000544999 CTNNA3Q9UI47 895 aa19.97■□□□□ 0.79
HOXD8-204ENST00000544999 DIS3Q9Y2L1 958 aaKnown RBP19.97■□□□□ 0.79
HOXD8-204ENST00000544999 FRMPD3Q5JV73 1810 aa19.97■□□□□ 0.79
HOXD8-204ENST00000544999 PLXNA1Q9UIW2 1896 aa19.96■□□□□ 0.79
HOXD8-204ENST00000544999 MKI67P46013 3256 aaKnown RBP19.96■□□□□ 0.79
HOXD8-204ENST00000544999 MSCO60682 206 aa19.96■□□□□ 0.79
HOXD8-204ENST00000544999 CYBAP13498 195 aa19.96■□□□□ 0.79
HOXD8-204ENST00000544999 IKQ13123 557 aaPredicted RBP19.96■□□□□ 0.79
HOXD8-204ENST00000544999 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.96■□□□□ 0.79
HOXD8-204ENST00000544999 DIS3LQ8TF46 1054 aaKnown RBP19.96■□□□□ 0.79
HOXD8-204ENST00000544999 RUFY2Q8WXA3 655 aa19.96■□□□□ 0.79
HOXD8-204ENST00000544999 TTC14Q96N46 770 aa19.96■□□□□ 0.79
HOXD8-204ENST00000544999 TMEM47Q9BQJ4 181 aa19.96■□□□□ 0.79
HOXD8-204ENST00000544999 IL25Q9H293 177 aa19.96■□□□□ 0.79
HOXD8-204ENST00000544999 RAVER2Q9HCJ3 691 aaKnown RBP19.96■□□□□ 0.79
HOXD8-204ENST00000544999 RIPK3Q9Y572 518 aa19.96■□□□□ 0.79
HOXD8-204ENST00000544999 NEDD4P46934 1319 aa19.96■□□□□ 0.79
HOXD8-204ENST00000544999 MNX1P50219 401 aaPredicted RBP19.95■□□□□ 0.78
HOXD8-204ENST00000544999 IMMTQ16891 758 aaKnown RBP19.95■□□□□ 0.78
HOXD8-204ENST00000544999 ZNF792Q3KQV3 632 aa19.95■□□□□ 0.78
HOXD8-204ENST00000544999 KCTD1Q719H9 257 aa19.95■□□□□ 0.78
HOXD8-204ENST00000544999 TRPV1Q8NER1 839 aa19.95■□□□□ 0.78
HOXD8-204ENST00000544999 DDX20Q9UHI6 824 aaKnown RBP19.95■□□□□ 0.78
HOXD8-204ENST00000544999 PGK2P07205 417 aa19.94■□□□□ 0.78
HOXD8-204ENST00000544999 CHMLP26374 656 aa19.94■□□□□ 0.78
HOXD8-204ENST00000544999 CNGA1P29973 690 aa19.94■□□□□ 0.78
HOXD8-204ENST00000544999 CHST13Q8NET6 341 aa19.94■□□□□ 0.78
HOXD8-204ENST00000544999 CHMP4CQ96CF2 233 aa19.94■□□□□ 0.78
HOXD8-204ENST00000544999 C11orf49Q9H6J7 331 aa19.94■□□□□ 0.78
HOXD8-204ENST00000544999 FBXO40Q9UH90 709 aa19.94■□□□□ 0.78
HOXD8-204ENST00000544999 MTMR7Q9Y216 660 aa19.94■□□□□ 0.78
HOXD8-204ENST00000544999 SLC4A3P48751 1232 aa19.93■□□□□ 0.78
HOXD8-204ENST00000544999 CCDC96Q2M329 555 aa19.93■□□□□ 0.78
HOXD8-204ENST00000544999 CCDC178Q5BJE1 867 aa19.93■□□□□ 0.78
HOXD8-204ENST00000544999 RASGRP2Q7LDG7 609 aa19.93■□□□□ 0.78
HOXD8-204ENST00000544999 NRBP1Q9UHY1 535 aa19.93■□□□□ 0.78
HOXD8-204ENST00000544999 BTNL9Q6UXG8 535 aa19.92■□□□□ 0.78
HOXD8-204ENST00000544999 IQCA1Q86XH1 822 aa19.92■□□□□ 0.78
HOXD8-204ENST00000544999 DGKHQ86XP1 1220 aa19.92■□□□□ 0.78
HOXD8-204ENST00000544999 DDX11Q96FC9 970 aa19.92■□□□□ 0.78
HOXD8-204ENST00000544999 TINF2Q9BSI4 451 aa19.92■□□□□ 0.78
HOXD8-204ENST00000544999 PRR12Q9ULL5 1215 aa19.92■□□□□ 0.78
HOXD8-204ENST00000544999 ZNF536O15090 1300 aa19.92■□□□□ 0.78
HOXD8-204ENST00000544999 ALPK3Q96L96 1907 aa19.92■□□□□ 0.78
HOXD8-204ENST00000544999 DNAJC25-GNG10A0A024R161 153 aa19.91■□□□□ 0.78
HOXD8-204ENST00000544999 H0YGN5 161 aa19.91■□□□□ 0.78
HOXD8-204ENST00000544999 SEPT4O43236 478 aa19.91■□□□□ 0.78
HOXD8-204ENST00000544999 KDM4AO75164 1064 aa19.91■□□□□ 0.78
HOXD8-204ENST00000544999 PDHBP11177 359 aa19.91■□□□□ 0.78
HOXD8-204ENST00000544999 TKFCQ3LXA3 575 aa19.91■□□□□ 0.78
HOXD8-204ENST00000544999 CENPQQ7L2Z9 268 aaPredicted RBP19.91■□□□□ 0.78
HOXD8-204ENST00000544999 MSL3Q8N5Y2 521 aaKnown RBP19.91■□□□□ 0.78
HOXD8-204ENST00000544999 KRT23Q9C075 422 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms