RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ABCB5Q2M3G0 1257 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 OTUD6AQ7L8S5 288 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 PRPF6O94906 941 aaKnown RBP14.15□□□□□ -0.14
CHD4-211ENST00000544484 CFAP157Q5JU67 520 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 ARHGAP27Q6ZUM4 889 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 NLRP10Q86W26 655 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 IFT20Q8IY31 132 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 CCDC105Q8IYK2 499 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 A0A087WWV3 80 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 CEP57Q86XR8 500 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 OR8K1Q8NGG5 319 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 MRPL11Q9Y3B7 192 aaKnown RBP14.15□□□□□ -0.14
CHD4-211ENST00000544484 PPEF1O14829 653 aaPredicted RBP14.15□□□□□ -0.14
CHD4-211ENST00000544484 PLA2G4DQ86XP0 818 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 CCDC117Q8IWD4 279 aaPredicted RBP14.15□□□□□ -0.14
CHD4-211ENST00000544484 FLAD1Q8NFF5 587 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
CHD4-211ENST00000544484 GNPTABQ3T906 1256 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 GADL1Q6ZQY3 521 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 SIRT2Q8IXJ6 389 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 LCORLQ8N3X6 602 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 OSBP2Q969R2 916 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 FTOQ9C0B1 505 aaKnown RBP eCLIP14.15□□□□□ -0.144e-11■■□□□ 11.8
CHD4-211ENST00000544484 SUGCTQ9HAC7 445 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 TRPC6Q9Y210 931 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 SAMD9LQ8IVG5 1584 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 PTPN12Q05209 780 aaKnown RBP14.15□□□□□ -0.14
CHD4-211ENST00000544484 TSC1Q92574 1164 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 PGBD1Q96JS3 809 aa14.15□□□□□ -0.14
CHD4-211ENST00000544484 KCTD1Q719H9 257 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 ANKRD35Q8N283 1001 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 CNKSR1Q969H4 720 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 CYP2D7A0A087X1C5 515 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 K7ENM7 598 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 STAT1P42224 750 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 AFAP1L1Q8TED9 768 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 PIGBQ92521 554 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 OSBPL3Q9H4L5 887 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 AS3MTQ9HBK9 375 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 GPR108Q9NPR9 543 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 RPN1P04843 607 aaKnown RBP14.14□□□□□ -0.15
CHD4-211ENST00000544484 FAM178BQ8IXR5 827 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 ARMCX3Q9UH62 379 aaPredicted RBP14.14□□□□□ -0.15
CHD4-211ENST00000544484 SRP68Q9UHB9 627 aaKnown RBP14.14□□□□□ -0.15
CHD4-211ENST00000544484 TTLL3Q9Y4R7 772 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 ATP7BP35670 1465 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.14□□□□□ -0.15
CHD4-211ENST00000544484 ADD2P35612 726 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 SLC16A2P36021 539 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 CCDC127Q96BQ5 260 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 PPANQ9NQ55 473 aaKnown RBP14.14□□□□□ -0.15
CHD4-211ENST00000544484 ZNF853P0CG23 659 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 CFAP221Q4G0U5 840 aa14.14□□□□□ -0.15
CHD4-211ENST00000544484 SETDB1Q15047 1291 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 PTPN21Q16825 1174 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 MAP7D1Q3KQU3 841 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 SND1Q7KZF4 910 aaKnown RBP eCLIP14.13□□□□□ -0.15
CHD4-211ENST00000544484 RNF169Q8NCN4 708 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 CSRNP1Q96S65 589 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 CCPG1Q9ULG6 757 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 BUB1O43683 1085 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 GDF11O95390 407 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 GAS8O95995 478 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 FAM47CQ5HY64 1035 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 GJA10Q969M2 543 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 PCDHA5Q9Y5H7 936 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 ZNF521Q96K83 1311 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 TUBB2AQ13885 445 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 GPR162Q16538 588 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 GEN1Q17RS7 908 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 TBC1D10BQ4KMP7 808 aaPredicted RBP14.13□□□□□ -0.15
CHD4-211ENST00000544484 NSUN7Q8NE18 718 aaKnown RBP14.13□□□□□ -0.15
CHD4-211ENST00000544484 TUBB2BQ9BVA1 445 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 DLATP10515 647 aaKnown RBP14.13□□□□□ -0.15
CHD4-211ENST00000544484 NCAPG2Q86XI2 1143 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
CHD4-211ENST00000544484 LEMD3Q9Y2U8 911 aa14.13□□□□□ -0.15
CHD4-211ENST00000544484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.13□□□□□ -0.15
CHD4-211ENST00000544484 GTPBP6O43824 516 aaPredicted RBP14.13□□□□□ -0.15
CHD4-211ENST00000544484 SASH1O94885 1247 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 LIG4P49917 911 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 GAS2L3Q86XJ1 694 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 SLFN12Q8IYM2 578 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 RTEL1Q9NZ71 1219 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 KIAA1024Q9UPX6 916 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 CARMIL3Q8ND23 1372 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 GOLGA6CA6NDK9 693 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 GNA14O95837 355 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 GOLGA6DP0CG33 693 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 SNX16P57768 344 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 POLR2FP61218 127 aaKnown RBP14.12□□□□□ -0.15
CHD4-211ENST00000544484 DIXDC1Q155Q3 683 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 GPR101Q96P66 508 aaPredicted RBP14.12□□□□□ -0.15
CHD4-211ENST00000544484 GOLGA6AQ9NYA3 693 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 CLUL1Q15846 466 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 MYRIPQ8NFW9 859 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 FAM26FQ5R3K3 315 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 DCAF15Q66K64 600 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 WDR70Q9NW82 654 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 KDM5CP41229 1560 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms