RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ARHGAP4P98171 946 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 RASEFQ8IZ41 740 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 EFCAB8A8MWE9 144 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 NOP9Q86U38 636 aaKnown RBP16.94■□□□□ 0.3
CHD4-210ENST00000544040 KDRP35968 1356 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 FRMPD2Q68DX3 1309 aaPredicted RBP16.94■□□□□ 0.3
CHD4-210ENST00000544040 SMCO2A6NFE2 343 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 ENC1O14682 589 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 GNA14O95837 355 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 PLCB4Q15147 1175 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 MCUQ8NE86 351 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 EYA1Q99502 592 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 ECE1P42892 770 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 ANKRD13CQ8N6S4 541 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 NCAPGQ9BPX3 1015 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 HAUS8Q9BT25 410 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 MAGED2Q9UNF1 606 aaPredicted RBP16.94■□□□□ 0.3
CHD4-210ENST00000544040 CCDC51Q96ER9 411 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 KIAA1468Q9P260 1216 aa16.94■□□□□ 0.3
CHD4-210ENST00000544040 HAUS2Q9NVX0 235 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 PNMA6EA0A0J9YXQ4 647 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 CAPN9O14815 690 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 SART1O43290 800 aaKnown RBP16.93■□□□□ 0.3
CHD4-210ENST00000544040 ZBED4O75132 1171 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 MYOCDQ8IZQ8 938 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 CHMP6Q96FZ7 201 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 PANK4Q9NVE7 773 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 LUC7L3O95232 432 aaKnown RBP16.93■□□□□ 0.3
CHD4-210ENST00000544040 SUCLG2Q96I99 432 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 IFT122Q9HBG6 1241 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 WDR7Q9Y4E6 1490 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 OATP04181 439 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 TRPA1O75762 1119 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 EEF1GP26641 437 aaKnown RBP16.93■□□□□ 0.3
CHD4-210ENST00000544040 PDE6CP51160 858 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 TFAP4Q01664 338 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 ZKSCAN8Q15776 578 aaPredicted RBP16.93■□□□□ 0.3
CHD4-210ENST00000544040 SPATA5Q8NB90 893 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 RNF169Q8NCN4 708 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 DEPTORQ8TB45 409 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 EEF2KMTQ96G04 330 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 CLIC6Q96NY7 704 aa16.93■□□□□ 0.3
CHD4-210ENST00000544040 P4HA1P13674 534 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 YWHAGP61981 247 aaKnown RBP eCLIP16.92■□□□□ 0.32e-6■□□□□ 11.3
CHD4-210ENST00000544040 CNBD1Q8NA66 436 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 FANCLQ9NW38 375 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 DLATP10515 647 aaKnown RBP16.92■□□□□ 0.3
CHD4-210ENST00000544040 RASSF7Q02833 373 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 HADHQ16836 314 aaKnown RBP16.92■□□□□ 0.3
CHD4-210ENST00000544040 FAM133BQ5BKY9 247 aaKnown RBP16.92■□□□□ 0.3
CHD4-210ENST00000544040 REXO1Q8N1G1 1221 aaKnown RBP16.92■□□□□ 0.3
CHD4-210ENST00000544040 METTL22Q9BUU2 404 aaPredicted RBP16.92■□□□□ 0.3
CHD4-210ENST00000544040 NUB1Q9Y5A7 615 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 NESP48681 1621 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 SLC12A1Q13621 1099 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 HP1BP3Q5SSJ5 553 aaPredicted RBP16.92■□□□□ 0.3
CHD4-210ENST00000544040 SLC39A2Q9NP94 309 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 GGA1Q9UJY5 639 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 TRPC6Q9Y210 931 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 GAS7O60861 476 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 EHHADHQ08426 723 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 BFSP1Q12934 665 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 SCYL3Q8IZE3 742 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 ZNF148Q9UQR1 794 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 K7ENM7 598 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 BRDTQ58F21 947 aaPredicted RBP16.92■□□□□ 0.3
CHD4-210ENST00000544040 RAPH1Q70E73 1250 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 NLRP7Q8WX94 980 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 GLT8D2Q9H1C3 349 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 FIS1Q9Y3D6 152 aa16.92■□□□□ 0.3
CHD4-210ENST00000544040 CNGA1P29973 690 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 SESTD1Q86VW0 696 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 PLBD2Q8NHP8 589 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 TCP11Q8WWU5 503 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 IVNS1ABPQ9Y6Y0 642 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 TTC4O95801 387 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 FOXD4Q12950 439 aaPredicted RBP16.91■□□□□ 0.3
CHD4-210ENST00000544040 EDC3Q96F86 508 aaKnown RBP16.91■□□□□ 0.3
CHD4-210ENST00000544040 DCAF5Q96JK2 942 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 ADALQ6DHV7 355 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 KBTBD3Q8NAB2 608 aa16.91■□□□□ 0.3
CHD4-210ENST00000544040 TYW1Q9NV66 732 aaKnown RBP16.91■□□□□ 0.3
CHD4-210ENST00000544040 TESPA1A2RU30 521 aaPredicted RBP16.9■□□□□ 0.3
CHD4-210ENST00000544040 ASPHQ12797 758 aa16.9■□□□□ 0.3
CHD4-210ENST00000544040 SNX1Q13596 522 aa16.9■□□□□ 0.3
CHD4-210ENST00000544040 SPATS2Q86XZ4 545 aaKnown RBP16.9■□□□□ 0.3
CHD4-210ENST00000544040 PPWD1Q96BP3 646 aaKnown RBP16.9■□□□□ 0.3
CHD4-210ENST00000544040 PYCARDQ9ULZ3 195 aa16.9■□□□□ 0.3
CHD4-210ENST00000544040 LIG4P49917 911 aa16.9■□□□□ 0.3
CHD4-210ENST00000544040 GLG1Q92896 1179 aa16.9■□□□□ 0.3
CHD4-210ENST00000544040 INTS9Q9NV88 658 aaKnown RBP16.9■□□□□ 0.3
CHD4-210ENST00000544040 FLT4P35916 1363 aa16.9■□□□□ 0.3
CHD4-210ENST00000544040 M0QZ92 97 aa16.9■□□□□ 0.3
CHD4-210ENST00000544040 TMED1Q13445 227 aa16.9■□□□□ 0.3
CHD4-210ENST00000544040 PPM1KQ8N3J5 372 aa16.9■□□□□ 0.3
CHD4-210ENST00000544040 H7C0C1 242 aa16.9■□□□□ 0.3
CHD4-210ENST00000544040 ATP5OP48047 213 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms