RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 EPSTI1Q96J88 318 aa10.87□□□□□ -0.67
TCF4-208ENST00000543082 PYM1Q9BRP8 204 aaKnown RBP10.87□□□□□ -0.67
TCF4-208ENST00000543082 ZNHIT6Q9NWK9 470 aaKnown RBP10.87□□□□□ -0.67
TCF4-208ENST00000543082 STIM2Q9P246 746 aa10.87□□□□□ -0.67
TCF4-208ENST00000543082 DENND2AQ9ULE3 1009 aa10.87□□□□□ -0.67
TCF4-208ENST00000543082 ODF2LQ9ULJ1 636 aa10.87□□□□□ -0.67
TCF4-208ENST00000543082 DISP2A7MBM2 1401 aa10.87□□□□□ -0.67
TCF4-208ENST00000543082 PPP1R37O75864 691 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 PRLRP16471 622 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 ZAP70P43403 619 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 MRPL12P52815 198 aaKnown RBP10.86□□□□□ -0.67
TCF4-208ENST00000543082 NR5A1Q13285 461 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 PTGISQ16647 500 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 RTN1Q16799 776 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 RNF187Q5TA31 235 aaPredicted RBP10.86□□□□□ -0.67
TCF4-208ENST00000543082 WDR59Q6PJI9 974 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 CCDC13Q8IYE1 715 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 TRIM58Q8NG06 486 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 LRRC1Q9BTT6 524 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 CARD10Q9BWT7 1032 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 RMND1Q9NWS8 449 aa10.86□□□□□ -0.67
TCF4-208ENST00000543082 CCDC189A1A4V9 331 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 H7C1D1 291 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 IFIT3O14879 490 aaKnown RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 ERCC3P19447 782 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 CALRP27797 417 aaKnown RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 KIF5AQ12840 1032 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 CREG2Q8IUH2 290 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 C1orf131Q8NDD1 294 aaKnown RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 ZIM3Q96PE6 472 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 SLC40A1Q9NP59 571 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 CABP5Q9NP86 173 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 CWC25Q9NXE8 425 aaPredicted RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 DMGDHQ9UI17 866 aaKnown RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 PDS5AQ29RF7 1337 aaKnown RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 MYH10P35580 1976 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 TACC1O75410 805 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 PARP1P09874 1014 aaKnown RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 TCP1P17987 556 aaKnown RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 NR1D1P20393 614 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 SCP2P22307 547 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 EEF1GP26641 437 aaKnown RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 ATP1A2P50993 1020 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 VAV2P52735 878 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 EZH2Q15910 746 aaKnown RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 SNCBQ16143 134 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 GLE1Q53GS7 698 aaKnown RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 CFAP58Q5T655 872 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 ZNF658Q5TYW1 1059 aaPredicted RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 NLRP14Q86W24 1093 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 SPATA4Q8NEY3 305 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 NKX2-3Q8TAU0 364 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 MAGEC3Q8TD91 643 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 TBC1D22AQ8WUA7 517 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 ZNF496Q96IT1 587 aaPredicted RBP10.85□□□□□ -0.67
TCF4-208ENST00000543082 LACRTQ9GZZ8 138 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 FBXO3Q9UK99 471 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 TFR2Q9UP52 801 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 XDHP47989 1333 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 RGPD5Q99666 1765 aa10.85□□□□□ -0.67
TCF4-208ENST00000543082 PPP1R12AO14974 1030 aaPredicted RBP10.84□□□□□ -0.67
TCF4-208ENST00000543082 ADORA1P30542 326 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 ADD2P35612 726 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 CRYMQ14894 314 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 HAUS3Q68CZ6 603 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 CD302Q8IX05 232 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 TEX11Q8IYF3 940 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 SH2D3CQ8N5H7 860 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 RETREG2Q8NC44 543 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 MYCBPAPQ8TBZ2 947 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 HDAC7Q8WUI4 952 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 ZNF594Q96JF6 807 aaPredicted RBP10.84□□□□□ -0.67
TCF4-208ENST00000543082 RNPC3Q96LT9 517 aaKnown RBP10.84□□□□□ -0.67
TCF4-208ENST00000543082 NUP58Q9BVL2 599 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 CNNM2Q9H8M5 875 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 HYOU1Q9Y4L1 999 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 MACROD2A1Z1Q3 448 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 USO1O60763 962 aaKnown RBP10.84□□□□□ -0.67
TCF4-208ENST00000543082 COBLO75128 1261 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 FAM107AO95990 144 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 EZRP15311 586 aaKnown RBP10.84□□□□□ -0.67
TCF4-208ENST00000543082 KCNA6P17658 529 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 BRD2P25440 801 aaKnown RBP10.84□□□□□ -0.67
TCF4-208ENST00000543082 DNM2P50570 870 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 RCAN1P53805 252 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 SCARF1Q14162 830 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 CCDC181Q5TID7 509 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 LRCH2Q5VUJ6 765 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 C8orf74Q6P047 294 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 CCDC121Q6ZUS5 278 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 FMNL3Q8IVF7 1028 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 TTC5Q8N0Z6 440 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 CRACR2BQ8N4Y2 399 aaPredicted RBP10.84□□□□□ -0.67
TCF4-208ENST00000543082 C3orf20Q8ND61 904 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 ZNF507Q8TCN5 953 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 OXER1Q8TDS5 423 aa10.84□□□□□ -0.67
TCF4-208ENST00000543082 CCT8L2Q96SF2 557 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms