RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 TNFRSF10AO00220 468 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 GPAA1O43292 621 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 ST18O60284 1047 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 CLTBP09497 229 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 ERCC3P19447 782 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 COL9A1P20849 921 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 MCM2P49736 904 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 TLE2Q04725 743 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 KRT32Q14532 448 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 PRAMEF19Q5SWL8 479 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 HSCBQ8IWL3 235 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 MAGEB6Q8N7X4 407 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 MIGA1Q8NAN2 632 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 SHCBP1Q8NEM2 672 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 SEC62Q99442 399 aaKnown RBP13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 TANGO6Q9C0B7 1094 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 MROH8Q9H579 483 aa13.64□□□□□ -0.23
SRGAP1-205ENST00000542841 ZNF236Q9UL36 1845 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 COBLO75128 1261 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 HSPD1P10809 573 aaKnown RBP13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 RARBP10826 455 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 RAG1P15918 1043 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 ITGB8P26012 769 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 GRIN2CQ14957 1233 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 FAM47AQ5JRC9 791 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 CREB3L3Q68CJ9 461 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 ABRAQ8N0Z2 381 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 MB21D1Q8N884 522 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 PUS7LQ9H0K6 701 aaKnown RBP13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 XPNPEP3Q9NQH7 507 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 PHF24Q9UPV7 400 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 SNX14Q9Y5W7 946 aa13.63□□□□□ -0.23
SRGAP1-205ENST00000542841 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 SLC27A2O14975 620 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 DNAJB2P25686 324 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 PSMA5P28066 241 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 SHMT1P34896 483 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 FPGSQ05932 587 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 PLS1Q14651 629 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 SEPT2Q15019 361 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 ALX1Q15699 326 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 RNF180Q86T96 592 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 NCAPG2Q86XI2 1143 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 MAML3Q96JK9 1138 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 NRBP1Q9UHY1 535 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 MYH1P12882 1939 aa13.62□□□□□ -0.23
SRGAP1-205ENST00000542841 MPHOSPH10O00566 681 aaKnown RBP13.61□□□□□ -0.23
SRGAP1-205ENST00000542841 KIAA0355O15063 1070 aa13.61□□□□□ -0.23
SRGAP1-205ENST00000542841 PQBP1O60828 265 aaKnown RBP13.61□□□□□ -0.23
SRGAP1-205ENST00000542841 POLR3DP05423 398 aaPredicted RBP13.61□□□□□ -0.23
SRGAP1-205ENST00000542841 FCER1AP12319 257 aa13.61□□□□□ -0.23
SRGAP1-205ENST00000542841 GUCY1A2P33402 732 aa13.61□□□□□ -0.23
SRGAP1-205ENST00000542841 PLCD1P51178 756 aa13.61□□□□□ -0.23
SRGAP1-205ENST00000542841 EPHB4P54760 987 aa13.61□□□□□ -0.23
SRGAP1-205ENST00000542841 ZNF576Q9H609 170 aa13.61□□□□□ -0.23
SRGAP1-205ENST00000542841 TMEM39AQ9NV64 488 aa13.61□□□□□ -0.23
SRGAP1-205ENST00000542841 A0A1W2PRG0 241 aa13.6□□□□□ -0.23
SRGAP1-205ENST00000542841 PATL2C9JE40 543 aaKnown RBP13.6□□□□□ -0.23
SRGAP1-205ENST00000542841 CHGBP05060 677 aa13.6□□□□□ -0.23
SRGAP1-205ENST00000542841 USP38Q8NB14 1042 aa13.6□□□□□ -0.23
SRGAP1-205ENST00000542841 TTC28Q96AY4 2481 aa13.6□□□□□ -0.23
SRGAP1-205ENST00000542841 TIFAQ96CG3 184 aa13.6□□□□□ -0.23
SRGAP1-205ENST00000542841 STRBPQ96SI9 672 aaKnown RBP13.6□□□□□ -0.23
SRGAP1-205ENST00000542841 MAGEB6P1A0A0J9YX57 407 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 A0A1W2PQ45 241 aaPredicted RBP13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 A0A1W2PQY0 241 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 DCDC2CA8MYV0 355 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 FLOT1O75955 427 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 PGK1P00558 417 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 HMGB1P09429 215 aaKnown RBP13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 DSG3P32926 999 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 IMMTQ16891 758 aaKnown RBP13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 SLFNL1Q499Z3 407 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 GIMAP6Q6P9H5 292 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 ATXN2LQ8WWM7 1075 aaKnown RBP13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 TOX2Q96NM4 488 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 GAS2L1Q99501 681 aaPredicted RBP13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 NACAP1Q9BZK3 213 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 ALDH8A1Q9H2A2 487 aaPredicted RBP13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 ZSWIM6Q9HCJ5 1215 aa13.59□□□□□ -0.23
SRGAP1-205ENST00000542841 K7ELQ4 463 aaPredicted RBP13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 MBD4O95243 580 aa13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 SLC25A27O95847 323 aa13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 CYP21A2P08686 494 aa13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 NEK4P51957 841 aa13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 GABPAQ06546 454 aa13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 VPS53Q5VIR6 699 aa13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 ANKRD33Q7Z3H0 272 aa13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 NUP133Q8WUM0 1156 aa13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 ATG4CQ96DT6 458 aa13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 MMP19Q99542 508 aa13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 RIOK1Q9BRS2 568 aaKnown RBP13.58□□□□□ -0.24
SRGAP1-205ENST00000542841 A0A0G2JMZ2 1700 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 FOXP2O15409 715 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 FGAP02671 866 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 AKR1A1P14550 325 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 FAAP100Q0VG06 881 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms