RNA–Protein interactions for RNA: ENST00000542791.1

MRPS35-205, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-205ENST00000542791 NDUFB10O96000 172 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 APPP05067 770 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 PLS1Q14651 629 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 FAM83BQ5T0W9 1011 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 NCAPG2Q86XI2 1143 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 RIOX2Q8IUF8 465 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 C7orf61Q8IZ16 206 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 MKL1Q969V6 931 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 GDF15Q99988 308 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 FSD1Q9BTV5 496 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 NACAP1Q9BZK3 213 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 ZNF287Q9HBT7 754 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 SLC5A4Q9NY91 659 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 MTMR4Q9NYA4 1195 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 STAP2Q9UGK3 403 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 SYNPO2Q9UMS6 1093 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 PLIN4Q96Q06 1357 aa9.32□□□□□ -0.92
MRPS35-205ENST00000542791 GREB1LQ9C091 1923 aaPredicted RBP9.32□□□□□ -0.92
MRPS35-205ENST00000542791 F5H6K3 240 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 FCER1AP12319 257 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 BMP8BP34820 402 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 COPB2P35606 906 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 STAT3P40763 770 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 KLRC3Q07444 240 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 LRRC26Q2I0M4 334 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 STK11IPQ8N1F8 1099 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 CEP95Q96GE4 821 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 MAML3Q96JK9 1138 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 NUP88Q99567 741 aaPredicted RBP9.31□□□□□ -0.92
MRPS35-205ENST00000542791 SLF1Q9BQI6 1058 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 ZMYND8Q9ULU4 1186 aaPredicted RBP9.31□□□□□ -0.92
MRPS35-205ENST00000542791 ALPK3Q96L96 1907 aa9.31□□□□□ -0.92
MRPS35-205ENST00000542791 DNM1LO00429 736 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 ATP2A1O14983 1001 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 SEPT4O43236 478 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 TTLL1O95922 423 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 PPARAQ07869 468 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 AAMPQ13685 434 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 ANKRD45Q5TZF3 282 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 TICAM2Q86XR7 235 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 ZNF444Q8N0Y2 327 aaPredicted RBP9.3□□□□□ -0.92
MRPS35-205ENST00000542791 PRPF38AQ8NAV1 312 aaKnown RBP9.3□□□□□ -0.92
MRPS35-205ENST00000542791 GMCL1P1Q8NEA9 526 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 NEDD1Q8NHV4 660 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 TEX13BQ9BXU2 312 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 NAPBQ9H115 298 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 OCEL1Q9H607 264 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 CLIP2Q9UDT6 1046 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 NRBP1Q9UHY1 535 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 DIS3Q9Y2L1 958 aaKnown RBP9.3□□□□□ -0.92
MRPS35-205ENST00000542791 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.3□□□□□ -0.92
MRPS35-205ENST00000542791 CHD9Q3L8U1 2897 aa9.3□□□□□ -0.92
MRPS35-205ENST00000542791 TTC28Q96AY4 2481 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 MYH8P13535 1937 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 SPTBN5Q9NRC6 3674 aaKnown RBP9.29□□□□□ -0.92
MRPS35-205ENST00000542791 RAD21O60216 631 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 PGK2P07205 417 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 CNGA1P29973 690 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 MAGEA10P43363 369 aaPredicted RBP9.29□□□□□ -0.92
MRPS35-205ENST00000542791 PDE1AP54750 535 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 PDE4BQ07343 736 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 PDAP1Q13442 181 aaKnown RBP9.29□□□□□ -0.92
MRPS35-205ENST00000542791 KCTD2Q14681 263 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 ZNF792Q3KQV3 632 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 CCDC129Q6ZRS4 1044 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
MRPS35-205ENST00000542791 EVI5LQ96CN4 794 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 MMP19Q99542 508 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 SLC38A10Q9HBR0 1119 aa9.29□□□□□ -0.92
MRPS35-205ENST00000542791 PARP14Q460N5 1801 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 SOX1O00570 391 aaPredicted RBP9.28□□□□□ -0.92
MRPS35-205ENST00000542791 SLC3A2P08195 630 aaKnown RBP9.28□□□□□ -0.92
MRPS35-205ENST00000542791 FGRP09769 529 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 TSPY3P0CV98 308 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 TSPY8P0CW00 308 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 SYN1P17600 705 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 NOVP48745 357 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 PSEN1P49768 467 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 OAZ1P54368 228 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 IRX5P78411 483 aaPredicted RBP9.28□□□□□ -0.92
MRPS35-205ENST00000542791 TFAP4Q01664 338 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 ALX1Q15699 326 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 FAM47AQ5JRC9 791 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 PRAMEF19Q5SWL8 479 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 VPS53Q5VIR6 699 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 SNRNP48Q6IEG0 339 aaKnown RBP9.28□□□□□ -0.92
MRPS35-205ENST00000542791 SMC5Q8IY18 1101 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 LRRC47Q8N1G4 583 aaKnown RBP9.28□□□□□ -0.92
MRPS35-205ENST00000542791 ARRDC4Q8NCT1 418 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 GMCL1Q96IK5 515 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 TINF2Q9BSI4 451 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 SENP6Q9GZR1 1112 aaPredicted RBP9.28□□□□□ -0.92
MRPS35-205ENST00000542791 HELLSQ9NRZ9 838 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 ANAPC4Q9UJX5 808 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 FEM1BQ9UK73 627 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 RIPK3Q9Y572 518 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 TACC3Q9Y6A5 838 aa9.28□□□□□ -0.92
MRPS35-205ENST00000542791 DNAJC25-GNG10A0A024R161 153 aa9.27□□□□□ -0.93
MRPS35-205ENST00000542791 ORC4O43929 436 aa9.27□□□□□ -0.93
MRPS35-205ENST00000542791 ZBED4O75132 1171 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms