RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SMTNL1A8MU46 457 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 TTLL1O95922 423 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 CACNB3P54284 484 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.14■□□□□ 0.17
LDB3-207ENST00000542786 TRIML1Q8N9V2 468 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 DHX58Q96C10 678 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 PAGE5Q96GU1 130 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 MED15Q96RN5 788 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 COL2A1P02458 1487 aaPredicted RBP16.14■□□□□ 0.17
LDB3-207ENST00000542786 DDTLA6NHG4 134 aaPredicted RBP16.14■□□□□ 0.17
LDB3-207ENST00000542786 HLA-DOAP06340 250 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 MYL5Q02045 173 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 ZNF543Q08ER8 600 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 LRMPQ12912 555 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 TMEM60Q9H2L4 133 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 FRMPD2Q68DX3 1309 aaPredicted RBP16.14■□□□□ 0.17
LDB3-207ENST00000542786 ATRNL1Q5VV63 1379 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 CCDC194A0A1B0GVG4 234 aa16.13■□□□□ 0.17
LDB3-207ENST00000542786 hCG_1984214I3L0E3 225 aa16.13■□□□□ 0.17
LDB3-207ENST00000542786 PDXDC2PQ6P474 469 aa16.13■□□□□ 0.17
LDB3-207ENST00000542786 ZNF713Q8N859 430 aaPredicted RBP16.13■□□□□ 0.17
LDB3-207ENST00000542786 CACTINQ8WUQ7 758 aaKnown RBP16.13■□□□□ 0.17
LDB3-207ENST00000542786 SMARCE1Q969G3 411 aa16.13■□□□□ 0.17
LDB3-207ENST00000542786 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
LDB3-207ENST00000542786 UBA5Q9GZZ9 404 aa16.13■□□□□ 0.17
LDB3-207ENST00000542786 DHX36Q9H2U1 1008 aaKnown RBP16.13■□□□□ 0.17
LDB3-207ENST00000542786 KCNA3P22001 575 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 NAPAP54920 295 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 FMR1Q06787 632 aaKnown RBP eCLIP16.12■□□□□ 0.17
LDB3-207ENST00000542786 DPYDQ12882 1025 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 NOLC1Q14978 699 aaKnown RBP eCLIP16.12■□□□□ 0.17
LDB3-207ENST00000542786 INF2Q27J81 1249 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 SHROOM1Q2M3G4 852 aaPredicted RBP16.12■□□□□ 0.17
LDB3-207ENST00000542786 KRT25Q7Z3Z0 450 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 DRC7Q8IY82 874 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 MLKLQ8NB16 471 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 SUPT20HQ8NEM7 779 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 MTMR8Q96EF0 704 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 KIF13BQ9NQT8 1826 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 ATP1A3P13637 1013 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 LONP1P36776 959 aaKnown RBP16.12■□□□□ 0.17
LDB3-207ENST00000542786 EIF6P56537 245 aaKnown RBP16.12■□□□□ 0.17
LDB3-207ENST00000542786 TATDN1Q6P1N9 297 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 CCDC12Q8WUD4 166 aaPredicted RBP16.12■□□□□ 0.17
LDB3-207ENST00000542786 MTRQ99707 1265 aa16.12■□□□□ 0.17
LDB3-207ENST00000542786 XPO4Q9C0E2 1151 aaKnown RBP16.12■□□□□ 0.17
LDB3-207ENST00000542786 MYH4Q9Y623 1939 aa16.11■□□□□ 0.17
LDB3-207ENST00000542786 SMCO2A6NFE2 343 aa16.11■□□□□ 0.17
LDB3-207ENST00000542786 MYO1BO43795 1136 aa16.11■□□□□ 0.17
LDB3-207ENST00000542786 C21orf2O43822 256 aa16.11■□□□□ 0.17
LDB3-207ENST00000542786 PPP1R11O60927 126 aaPredicted RBP16.11■□□□□ 0.17
LDB3-207ENST00000542786 LMOD1P29536 600 aaPredicted RBP16.11■□□□□ 0.17
LDB3-207ENST00000542786 ARID5BQ14865 1188 aa16.11■□□□□ 0.17
LDB3-207ENST00000542786 HOMER1Q86YM7 354 aa16.11■□□□□ 0.17
LDB3-207ENST00000542786 SIAH1Q8IUQ4 282 aa16.11■□□□□ 0.17
LDB3-207ENST00000542786 MKL1Q969V6 931 aa16.11■□□□□ 0.17
LDB3-207ENST00000542786 JMJD4Q9H9V9 463 aa16.11■□□□□ 0.17
LDB3-207ENST00000542786 IFNKQ9P0W0 207 aa16.11■□□□□ 0.17
LDB3-207ENST00000542786 PPIP5K2O43314 1243 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 EDIL3O43854 480 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 ZNF18P17022 549 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 PRPHP41219 470 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 FANCCQ00597 558 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 TCP10Q12799 353 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 GMLQ99445 158 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 C6orf50Q9HD87 102 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 PI4KBQ9UBF8 816 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 SEC63Q9UGP8 760 aaKnown RBP16.1■□□□□ 0.17
LDB3-207ENST00000542786 FAM196BA6NMK8 535 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 LAD1O00515 517 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 GNA11P29992 359 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 TTBK2Q6IQ55 1244 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 PSMD1Q99460 953 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 VAT1LQ9HCJ6 419 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 GPCPD1Q9NPB8 672 aa16.1■□□□□ 0.17
LDB3-207ENST00000542786 ENTPD3O75355 529 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 SMC2O95347 1197 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 CASP1P29466 404 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 AFMP43652 599 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 TPM4P67936 248 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 NONOQ15233 471 aaKnown RBP eCLIP16.09■□□□□ 0.17
LDB3-207ENST00000542786 CFAP100Q494V2 611 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 PPP4R3BQ5MIZ7 849 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 PPP1R18Q6NYC8 613 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 LRRC8AQ8IWT6 810 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 ADGRF4Q8IZF3 695 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 TTLL6Q8N841 843 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 ENOX1Q8TC92 643 aaKnown RBP16.09■□□□□ 0.17
LDB3-207ENST00000542786 DPF2Q92785 391 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 PRMT6Q96LA8 375 aaPredicted RBP16.09■□□□□ 0.17
LDB3-207ENST00000542786 PYM1Q9BRP8 204 aaKnown RBP16.09■□□□□ 0.17
LDB3-207ENST00000542786 FANCLQ9NW38 375 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 NYAP2Q9P242 653 aa16.09■□□□□ 0.17
LDB3-207ENST00000542786 PNMA6FA0A0J9YX94 578 aa16.08■□□□□ 0.17
LDB3-207ENST00000542786 ERCC5P28715 1186 aaPredicted RBP16.08■□□□□ 0.17
LDB3-207ENST00000542786 CUL4BQ13620 913 aa16.08■□□□□ 0.17
LDB3-207ENST00000542786 CCDC93Q567U6 631 aa16.08■□□□□ 0.17
LDB3-207ENST00000542786 NAALADL2Q58DX5 795 aa16.08■□□□□ 0.17
LDB3-207ENST00000542786 CT47A1Q5JQC4 288 aaPredicted RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms