RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 METAP2P50579 478 aaKnown RBP eCLIP13.76□□□□□ -0.21
KDM3A-216ENST00000542128 EPHB4P54760 987 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 SLC8A3P57103 927 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 CCDC174Q6PII3 467 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
KDM3A-216ENST00000542128 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
KDM3A-216ENST00000542128 CCDC51Q96ER9 411 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 XAGE2Q96GT9 111 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 ALG1Q9BT22 464 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 TSGA10Q9BZW7 698 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 CSADQ9Y600 493 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 RNF17Q9BXT8 1623 aaKnown RBP13.76□□□□□ -0.21
KDM3A-216ENST00000542128 ALDH3A1P30838 453 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 ZBTB16Q05516 673 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 TNFAIP1Q13829 316 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 SMCR8Q8TEV9 937 aaPredicted RBP13.76□□□□□ -0.21
KDM3A-216ENST00000542128 HAUS4Q9H6D7 363 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 CNNM2Q9H8M5 875 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 KCNH3Q9ULD8 1083 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 A0A1W2PRG0 241 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 RASSF10A6NK89 507 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 SLC27A2O14975 620 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 SASH3O75995 380 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 ZRANB2O95218 330 aaKnown RBP eCLIP13.76□□□□□ -0.21
KDM3A-216ENST00000542128 NDUFA8P51970 172 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 SESN3P58005 492 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 SLC26A6Q9BXS9 759 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 UBA5Q9GZZ9 404 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 SH2D4AQ9H788 454 aa13.76□□□□□ -0.21
KDM3A-216ENST00000542128 ABCA6Q8N139 1617 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 IKBKBO14920 756 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 RNF113AO15541 343 aaKnown RBP13.75□□□□□ -0.21
KDM3A-216ENST00000542128 CTSWP56202 376 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 PNOCQ13519 176 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 FAM133BQ5BKY9 247 aaKnown RBP13.75□□□□□ -0.21
KDM3A-216ENST00000542128 COG1Q8WTW3 980 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 MYO1AQ9UBC5 1043 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 PCDHA7Q9UN72 937 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 LAMB3Q13751 1172 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 ALS2CLQ60I27 953 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 OTUD7BQ6GQQ9 843 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 SIRT2Q8IXJ6 389 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.75□□□□□ -0.21
KDM3A-216ENST00000542128 CEP152O94986 1710 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 IGSF1Q8N6C5 1336 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 PPFIA2O75334 1257 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 TMTC2Q8N394 836 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 TTLL6Q8N841 843 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 RAB3IPQ96QF0 476 aaPredicted RBP13.75□□□□□ -0.21
KDM3A-216ENST00000542128 SLC40A1Q9NP59 571 aa13.75□□□□□ -0.21
KDM3A-216ENST00000542128 SOWAHDA6NJG2 315 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 NEURL1BA8MQ27 555 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 CYP27B1O15528 508 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 ATP2B4P23634 1241 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 KCNJ6P48051 423 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 GNAQP50148 359 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 LRRN4CLQ8ND94 238 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 IL17RAQ96F46 866 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 SEPT11Q9NVA2 429 aaKnown RBP13.74□□□□□ -0.21
KDM3A-216ENST00000542128 HAUS2Q9NVX0 235 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 AATFQ9NY61 560 aaKnown RBP eCLIP13.74□□□□□ -0.21
KDM3A-216ENST00000542128 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 TOGARAM2Q6ZUX3 1019 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
KDM3A-216ENST00000542128 TEKT1Q969V4 418 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 ZMAT2Q96NC0 199 aaKnown RBP13.74□□□□□ -0.21
KDM3A-216ENST00000542128 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
KDM3A-216ENST00000542128 ZBTB43O43298 467 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 LARGE1O95461 756 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 CFAP221Q4G0U5 840 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 ZSWIM6Q9HCJ5 1215 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 LARSQ9P2J5 1176 aaKnown RBP13.74□□□□□ -0.21
KDM3A-216ENST00000542128 SERPINA10Q9UK55 444 aa13.74□□□□□ -0.21
KDM3A-216ENST00000542128 PDHA1P08559 390 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 PFKFB1P16118 471 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 SCNN1DP51172 638 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 HOOK3Q86VS8 718 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 KLHL7Q8IXQ5 586 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.73□□□□□ -0.215e-7■■■■■ 51.1
KDM3A-216ENST00000542128 KIDINS220Q9ULH0 1771 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 PDE1CQ14123 709 aaPredicted RBP13.73□□□□□ -0.21
KDM3A-216ENST00000542128 HNRNPLLQ8WVV9 542 aaKnown RBP13.73□□□□□ -0.21
KDM3A-216ENST00000542128 GYG1P46976 350 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 IQCB1Q15051 598 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 DHX32Q7L7V1 743 aaKnown RBP13.73□□□□□ -0.21
KDM3A-216ENST00000542128 NLRP14Q86W24 1093 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 HVCN1Q96D96 273 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 SGSM3Q96HU1 749 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 VIPAS39Q9H9C1 493 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 PIM2Q9P1W9 311 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 ARHGEF40Q8TER5 1519 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 RPS6KA4O75676 772 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 TMED1Q13445 227 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 BEND6Q5SZJ8 279 aaPredicted RBP13.73□□□□□ -0.21
KDM3A-216ENST00000542128 HEATR3Q7Z4Q2 680 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 VPS36Q86VN1 386 aa13.73□□□□□ -0.21
KDM3A-216ENST00000542128 GSPT2Q8IYD1 628 aaKnown RBP13.73□□□□□ -0.21
KDM3A-216ENST00000542128 NCOA5Q9HCD5 579 aaKnown RBP13.73□□□□□ -0.21
KDM3A-216ENST00000542128 MROH5Q6ZUA9 1318 aa13.72□□□□□ -0.21
KDM3A-216ENST00000542128 RAD17O75943 681 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms