RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ZNF24P17028 368 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CES1P23141 567 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CCNHP51946 323 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CLNS1AP54105 237 aaKnown RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 UBAP2LQ14157 1087 aaKnown RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 BRD3Q15059 726 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CCDC183Q5T5S1 534 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CWF19L1Q69YN2 538 aaKnown RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 FOXR1Q6PIV2 292 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 SLC30A9Q6PML9 568 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 MTHFD1LQ6UB35 978 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 B4GALNT4Q76KP1 1039 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CEP57Q86XR8 500 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 GPR161Q8N6U8 529 aaKnown RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 C1orf127Q8N9H9 656 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 SMYD1Q8NB12 490 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 FAM71BQ8TC56 605 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CCHCR1Q8TD31 782 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 UBXN4Q92575 508 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 ARHGAP45Q92619 1136 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CRELD1Q96HD1 420 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 DHTKD1Q96HY7 919 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 RBM17Q96I25 401 aaKnown RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CDK5RAP3Q96JB5 506 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 FAM81BQ96LP2 452 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 PNMA5Q96PV4 448 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 RUFY1Q96T51 708 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 JPH2Q9BR39 696 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 IRX2Q9BZI1 471 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 GBP3Q9H0R5 595 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CHRDQ9H2X0 955 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 C12orf49Q9H741 205 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 TTC12Q9H892 705 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 ARFGAP3Q9NP61 516 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 EXOC1Q9NV70 894 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 NDFIP2Q9NV92 336 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 LMCD1Q9NZU5 365 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 MARK1Q9P0L2 795 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 DACH1Q9UI36 760 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 ZNF215Q9UL58 517 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 ATXN7L1Q9ULK2 861 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 CORO1CQ9ULV4 474 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 PHF24Q9UPV7 400 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 PPME1Q9Y570 386 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 MBD5Q9P267 1494 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 EVC2Q86UK5 1308 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 PLXNC1O60486 1568 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 RTL1A6NKG5 1358 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 DAPK1P53355 1430 aa4.9□□□□□ -1.62
SNHG1-219ENST00000542112 PPRC1Q5VV67 1664 aaKnown RBP4.9□□□□□ -1.62
SNHG1-219ENST00000542112 SHANK2Q9UPX8 1470 aa4.9□□□□□ -1.62
SNHG1-219ENST00000542112 SYCE3A1L190 88 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 DCDC2BA2VCK2 349 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 CCDC151A5D8V7 595 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 PHF20L1A8MW92 1017 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 EBAG9O00559 213 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 EREGO14944 169 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 BNIP3LO60238 219 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 SASH3O75995 380 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 LUC7L3O95232 432 aaKnown RBP4.9□□□□□ -1.63
SNHG1-219ENST00000542112 MAP3K6O95382 1288 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 PENKP01210 267 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-219ENST00000542112 MYL1P05976 194 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 RARAP10276 462 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 EDN3P14138 238 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 DESP17661 470 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 CASTP20810 708 aaKnown RBP4.9□□□□□ -1.63
SNHG1-219ENST00000542112 ITGA6P23229 1130 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 MCM3P25205 808 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 MCM2P49736 904 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 VEGFBP49765 207 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 TUBB2AQ13885 445 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 TPD52L1Q16890 204 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-219ENST00000542112 USH1GQ495M9 461 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 FAM182BQ5T319 152 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 ZFYVE27Q5T4F4 411 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 MFSD4BQ5TF39 518 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 USPL1Q5W0Q7 1092 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 MCTP1Q6DN14 999 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 SYNE3Q6ZMZ3 975 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 LUZP1Q86V48 1076 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 CCDC65Q8IXS2 484 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 C3orf20Q8ND61 904 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 OR13H1Q8NG92 308 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 B4GALNT2Q8NHY0 566 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 EPS8L3Q8TE67 593 aaKnown RBP4.9□□□□□ -1.63
SNHG1-219ENST00000542112 GTF3C6Q969F1 213 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 ZKSCAN4Q969J2 545 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-219ENST00000542112 PPP2R3CQ969Q6 453 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 CCDC47Q96A33 483 aaKnown RBP4.9□□□□□ -1.63
SNHG1-219ENST00000542112 ZNF837Q96EG3 531 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-219ENST00000542112 MRFAP1L1Q96HT8 127 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 CCDC114Q96M63 670 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 SCLT1Q96NL6 688 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 C8orf37Q96NL8 207 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 TUBB2BQ9BVA1 445 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 NPHS2Q9NP85 383 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 RNF19AQ9NV58 838 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 CNTN3Q9P232 1028 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 FAM8A1Q9UBU6 413 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms