RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 IL17AQ16552 155 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 RASGRP2Q7LDG7 609 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 C4orf32Q8N8J7 132 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 GSDMAQ96QA5 445 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 C6orf50Q9HD87 102 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 LAD1O00515 517 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 PDHBP11177 359 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 RXRBP28702 533 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 ERCC5P28715 1186 aaPredicted RBP12.29□□□□□ -0.44
NECAP1-206ENST00000542095 DPYDQ12882 1025 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 CFAP100Q494V2 611 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 ASPRV1Q53RT3 343 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 SOGA3Q5TF21 947 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 CDC42EP5Q6NZY7 148 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 KRT25Q7Z3Z0 450 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 HOMER1Q86YM7 354 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
NECAP1-206ENST00000542095 SCN9AQ15858 1988 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 IGKV6D-41A0A0C4DH26 115 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 USP17L5A8MUK1 530 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 hCG_1984214I3L0E3 225 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 NRDCO43847 1150 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 AKR1B1P15121 316 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 CRKP46108 304 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 FKBP1AP62942 108 aaKnown RBP12.29□□□□□ -0.44
NECAP1-206ENST00000542095 E2F4Q16254 413 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 INF2Q27J81 1249 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 DTHD1Q6ZMT9 781 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 ZNF713Q8N859 430 aaPredicted RBP12.29□□□□□ -0.44
NECAP1-206ENST00000542095 MYRIPQ8NFW9 859 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 CPVLQ9H3G5 476 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 DBNDD1Q9H9R9 158 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 NFE2L3Q9Y4A8 694 aa12.29□□□□□ -0.44
NECAP1-206ENST00000542095 SMCO2A6NFE2 343 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 TTLL1O95922 423 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 SFPQP23246 707 aaKnown RBP eCLIP12.28□□□□□ -0.44
NECAP1-206ENST00000542095 FMR1Q06787 632 aaKnown RBP eCLIP12.28□□□□□ -0.44
NECAP1-206ENST00000542095 TPD52L1Q16890 204 aaPredicted RBP12.28□□□□□ -0.44
NECAP1-206ENST00000542095 APOBEC3HQ6NTF7 200 aaKnown RBP12.28□□□□□ -0.44
NECAP1-206ENST00000542095 ZDHHC15Q96MV8 337 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 MRIQ9BWK5 157 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 RIOX1Q9H6W3 641 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 CDK11BP21127 795 aaKnown RBP12.28□□□□□ -0.44
NECAP1-206ENST00000542095 NONOQ15233 471 aaKnown RBP eCLIP12.28□□□□□ -0.44
NECAP1-206ENST00000542095 PPP4R3BQ5MIZ7 849 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 STRIP1Q5VSL9 837 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 PDXDC2PQ6P474 469 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 LRRC47Q8N1G4 583 aaKnown RBP12.28□□□□□ -0.44
NECAP1-206ENST00000542095 DPF2Q92785 391 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 PIGSQ96S52 555 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 VAT1LQ9HCJ6 419 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 SIPA1L1O43166 1804 aa12.28□□□□□ -0.44
NECAP1-206ENST00000542095 ESYT2A0FGR8 921 aa12.27□□□□□ -0.44
NECAP1-206ENST00000542095 DYNC1I1O14576 645 aa12.27□□□□□ -0.44
NECAP1-206ENST00000542095 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.44
NECAP1-206ENST00000542095 SNHG28P0DPA3 235 aa12.27□□□□□ -0.44
NECAP1-206ENST00000542095 ZNF18P17022 549 aa12.27□□□□□ -0.44
NECAP1-206ENST00000542095 SHMT1P34896 483 aa12.27□□□□□ -0.44
NECAP1-206ENST00000542095 PRPHP41219 470 aa12.27□□□□□ -0.44
NECAP1-206ENST00000542095 ARMCX5Q6P1M9 558 aa12.27□□□□□ -0.44
NECAP1-206ENST00000542095 EHD4Q9H223 541 aa12.27□□□□□ -0.44
NECAP1-206ENST00000542095 FRMPD2Q68DX3 1309 aaPredicted RBP12.27□□□□□ -0.45
NECAP1-206ENST00000542095 ECE2O60344 883 aa12.27□□□□□ -0.45
NECAP1-206ENST00000542095 HDLBPQ00341 1268 aaKnown RBP12.27□□□□□ -0.45
NECAP1-206ENST00000542095 VSTM4Q8IW00 320 aa12.27□□□□□ -0.45
NECAP1-206ENST00000542095 TRMT44Q8IYL2 757 aaKnown RBP12.27□□□□□ -0.45
NECAP1-206ENST00000542095 CNKSR1Q969H4 720 aa12.27□□□□□ -0.45
NECAP1-206ENST00000542095 C16orf45Q96MC5 204 aaPredicted RBP12.27□□□□□ -0.45
NECAP1-206ENST00000542095 UBA5Q9GZZ9 404 aa12.27□□□□□ -0.45
NECAP1-206ENST00000542095 KCND1Q9NSA2 647 aa12.27□□□□□ -0.45
NECAP1-206ENST00000542095 CASP1P29466 404 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 STAT6P42226 847 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 CCDC17Q96LX7 622 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 TMEM60Q9H2L4 133 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 SYNRGQ9UMZ2 1314 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 TNNT1P13805 278 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 EIF6P56537 245 aaKnown RBP12.26□□□□□ -0.45
NECAP1-206ENST00000542095 ORC2Q13416 577 aaPredicted RBP12.26□□□□□ -0.45
NECAP1-206ENST00000542095 DACT2Q5SW24 774 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 SPATA1Q5VX52 437 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 KIAA0825Q8IV33 1275 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 DHX36Q9H2U1 1008 aaKnown RBP12.26□□□□□ -0.45
NECAP1-206ENST00000542095 KCNQ5Q9NR82 932 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 DISC1Q9NRI5 854 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 RMND1Q9NWS8 449 aa12.26□□□□□ -0.45
NECAP1-206ENST00000542095 PSME4Q14997 1843 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 MPHOSPH10O00566 681 aaKnown RBP12.25□□□□□ -0.45
NECAP1-206ENST00000542095 UBA7P41226 1012 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 KCNJ6P48051 423 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 ZNF543Q08ER8 600 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 NFIAQ12857 509 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 CUL4BQ13620 913 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 LETM2Q2VYF4 491 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 REXO1Q8N1G1 1221 aaKnown RBP12.25□□□□□ -0.45
NECAP1-206ENST00000542095 CCDC112Q8NEF3 446 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 RASSF8Q8NHQ8 419 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 STAMQ92783 540 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 CCSER1Q9C0I3 900 aa12.25□□□□□ -0.45
NECAP1-206ENST00000542095 CCNT1O60563 726 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms