RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 TTC22Q5TAA0 569 aa26.1■■□□□ 1.77
C2CD3-216ENST00000541922 OLFML2BQ68BL8 750 aa26.1■■□□□ 1.77
C2CD3-216ENST00000541922 SNRNP48Q6IEG0 339 aaKnown RBP26.1■■□□□ 1.77
C2CD3-216ENST00000541922 GMCL1Q96IK5 515 aa26.1■■□□□ 1.77
C2CD3-216ENST00000541922 PCP11498 1178 aaKnown RBP26.09■■□□□ 1.77
C2CD3-216ENST00000541922 MCCP23508 829 aa26.09■■□□□ 1.77
C2CD3-216ENST00000541922 KCTD2Q14681 263 aa26.09■■□□□ 1.77
C2CD3-216ENST00000541922 AKNAD1Q5T1N1 836 aa26.09■■□□□ 1.77
C2CD3-216ENST00000541922 MFSD6Q6ZSS7 791 aa26.09■■□□□ 1.77
C2CD3-216ENST00000541922 CPXCR1Q8N123 301 aa26.09■■□□□ 1.77
C2CD3-216ENST00000541922 DIS3LQ8TF46 1054 aaKnown RBP26.09■■□□□ 1.77
C2CD3-216ENST00000541922 TMEM232C9JQI7 657 aa26.08■■□□□ 1.77
C2CD3-216ENST00000541922 CNGA1P29973 690 aa26.08■■□□□ 1.77
C2CD3-216ENST00000541922 CHURC1Q8WUH1 139 aa26.08■■□□□ 1.77
C2CD3-216ENST00000541922 CHMP4CQ96CF2 233 aa26.08■■□□□ 1.77
C2CD3-216ENST00000541922 RNF41Q9H4P4 317 aaPredicted RBP26.08■■□□□ 1.77
C2CD3-216ENST00000541922 SLC38A10Q9HBR0 1119 aa26.08■■□□□ 1.77
C2CD3-216ENST00000541922 PLXNA1Q9UIW2 1896 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 ZNF213O14771 459 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 ATP2A1O14983 1001 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 IGHA2P01877 340 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 GSPT1P15170 499 aaKnown RBP26.07■■□□□ 1.76
C2CD3-216ENST00000541922 NOVP48745 357 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 SLC4A3P48751 1232 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 STAT2P52630 851 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 IKQ13123 557 aaPredicted RBP26.07■■□□□ 1.76
C2CD3-216ENST00000541922 LHX8Q68G74 356 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 FAM160B2Q86V87 743 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 STAG1Q8WVM7 1258 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 NBPF3Q9H094 633 aa26.07■■□□□ 1.76
C2CD3-216ENST00000541922 H0YGN5 161 aa26.06■■□□□ 1.76
C2CD3-216ENST00000541922 FDX1P10109 184 aa26.06■■□□□ 1.76
C2CD3-216ENST00000541922 TBC1D10CQ8IV04 446 aa26.06■■□□□ 1.76
C2CD3-216ENST00000541922 MAML3Q96JK9 1138 aa26.06■■□□□ 1.76
C2CD3-216ENST00000541922 DSCC1Q9BVC3 393 aa26.06■■□□□ 1.76
C2CD3-216ENST00000541922 RAVER2Q9HCJ3 691 aaKnown RBP26.06■■□□□ 1.76
C2CD3-216ENST00000541922 TCP11L1Q9NUJ3 509 aa26.06■■□□□ 1.76
C2CD3-216ENST00000541922 MTMR7Q9Y216 660 aa26.06■■□□□ 1.76
C2CD3-216ENST00000541922 RIPK3Q9Y572 518 aa26.06■■□□□ 1.76
C2CD3-216ENST00000541922 LAMA4Q16363 1823 aa26.06■■□□□ 1.76
C2CD3-216ENST00000541922 FRMPD3Q5JV73 1810 aa26.06■■□□□ 1.76
C2CD3-216ENST00000541922 MSCO60682 206 aa26.05■■□□□ 1.76
C2CD3-216ENST00000541922 PGK2P07205 417 aa26.05■■□□□ 1.76
C2CD3-216ENST00000541922 CYBAP13498 195 aa26.05■■□□□ 1.76
C2CD3-216ENST00000541922 MNX1P50219 401 aaPredicted RBP26.05■■□□□ 1.76
C2CD3-216ENST00000541922 OAZ1P54368 228 aa26.05■■□□□ 1.76
C2CD3-216ENST00000541922 RCSD1Q6JBY9 416 aa26.05■■□□□ 1.76
C2CD3-216ENST00000541922 KCTD1Q719H9 257 aa26.05■■□□□ 1.76
C2CD3-216ENST00000541922 TRPV1Q8NER1 839 aa26.05■■□□□ 1.76
C2CD3-216ENST00000541922 DDX20Q9UHI6 824 aaKnown RBP26.05■■□□□ 1.76
C2CD3-216ENST00000541922 NR2E3Q9Y5X4 410 aa26.05■■□□□ 1.76
C2CD3-216ENST00000541922 TOP1P11387 765 aaKnown RBP26.04■■□□□ 1.76
C2CD3-216ENST00000541922 C11orf49Q9H6J7 331 aa26.04■■□□□ 1.76
C2CD3-216ENST00000541922 DIS3Q9Y2L1 958 aaKnown RBP26.04■■□□□ 1.76
C2CD3-216ENST00000541922 EVI5O60447 810 aa26.03■■□□□ 1.76
C2CD3-216ENST00000541922 PLA2G6O60733 806 aa26.03■■□□□ 1.76
C2CD3-216ENST00000541922 DCAF4Q8WV16 495 aa26.03■■□□□ 1.76
C2CD3-216ENST00000541922 ESR2Q92731 530 aa26.03■■□□□ 1.76
C2CD3-216ENST00000541922 DDX11Q96FC9 970 aa26.03■■□□□ 1.76
C2CD3-216ENST00000541922 TMEM47Q9BQJ4 181 aa26.03■■□□□ 1.76
C2CD3-216ENST00000541922 CTNNA3Q9UI47 895 aa26.03■■□□□ 1.76
C2CD3-216ENST00000541922 IMMTQ16891 758 aaKnown RBP26.02■■□□□ 1.76
C2CD3-216ENST00000541922 CCDC96Q2M329 555 aa26.02■■□□□ 1.76
C2CD3-216ENST00000541922 ZNF792Q3KQV3 632 aa26.02■■□□□ 1.76
C2CD3-216ENST00000541922 FBXO40Q9UH90 709 aa26.02■■□□□ 1.76
C2CD3-216ENST00000541922 NEDD4P46934 1319 aa26.02■■□□□ 1.76
C2CD3-216ENST00000541922 RASGRP2Q7LDG7 609 aa26.01■■□□□ 1.75
C2CD3-216ENST00000541922 CHST13Q8NET6 341 aa26.01■■□□□ 1.75
C2CD3-216ENST00000541922 RUFY2Q8WXA3 655 aa26.01■■□□□ 1.75
C2CD3-216ENST00000541922 ALPK3Q96L96 1907 aa26.01■■□□□ 1.75
C2CD3-216ENST00000541922 TTC14Q96N46 770 aa26.01■■□□□ 1.75
C2CD3-216ENST00000541922 RAD50Q92878 1312 aa26■■□□□ 1.75
C2CD3-216ENST00000541922 NT5C2P49902 561 aa26■■□□□ 1.75
C2CD3-216ENST00000541922 PRAMEF19Q5SWL8 479 aa26■■□□□ 1.75
C2CD3-216ENST00000541922 TINF2Q9BSI4 451 aa26■■□□□ 1.75
C2CD3-216ENST00000541922 IL25Q9H293 177 aa26■■□□□ 1.75
C2CD3-216ENST00000541922 PRR12Q9ULL5 1215 aa26■■□□□ 1.75
C2CD3-216ENST00000541922 SEPT4O43236 478 aa25.99■■□□□ 1.75
C2CD3-216ENST00000541922 ANKRD35Q8N283 1001 aa25.99■■□□□ 1.75
C2CD3-216ENST00000541922 NRBP1Q9UHY1 535 aa25.99■■□□□ 1.75
C2CD3-216ENST00000541922 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.98■■□□□ 1.75
C2CD3-216ENST00000541922 IQCA1Q86XH1 822 aa25.98■■□□□ 1.75
C2CD3-216ENST00000541922 HOMER2Q9NSB8 354 aa25.98■■□□□ 1.75
C2CD3-216ENST00000541922 PFASO15067 1338 aa25.97■■□□□ 1.75
C2CD3-216ENST00000541922 ZNF536O15090 1300 aa25.97■■□□□ 1.75
C2CD3-216ENST00000541922 DNAJC25-GNG10A0A024R161 153 aa25.97■■□□□ 1.75
C2CD3-216ENST00000541922 KDM4AO75164 1064 aa25.97■■□□□ 1.75
C2CD3-216ENST00000541922 CHMLP26374 656 aa25.97■■□□□ 1.75
C2CD3-216ENST00000541922 CCDC174Q6PII3 467 aa25.97■■□□□ 1.75
C2CD3-216ENST00000541922 AGBL1Q96MI9 1066 aa25.97■■□□□ 1.75
C2CD3-216ENST00000541922 ZKSCAN3Q9BRR0 538 aa25.97■■□□□ 1.75
C2CD3-216ENST00000541922 SMCHD1A6NHR9 2005 aa25.97■■□□□ 1.75
C2CD3-216ENST00000541922 CEP290O15078 2479 aa25.96■■□□□ 1.75
C2CD3-216ENST00000541922 B4E1Z4 1266 aa25.96■■□□□ 1.75
C2CD3-216ENST00000541922 COL6A1P12109 1028 aa25.96■■□□□ 1.75
C2CD3-216ENST00000541922 SNAP25P60880 206 aa25.96■■□□□ 1.75
C2CD3-216ENST00000541922 TKFCQ3LXA3 575 aa25.96■■□□□ 1.75
C2CD3-216ENST00000541922 CCDC178Q5BJE1 867 aa25.96■■□□□ 1.75
C2CD3-216ENST00000541922 ANO1Q5XXA6 986 aa25.96■■□□□ 1.75
C2CD3-216ENST00000541922 TTBK2Q6IQ55 1244 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms