RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 GBF1Q92538 1859 aa14.29□□□□□ -0.12
COPA-205ENST00000541366 MYH8P13535 1937 aa14.29□□□□□ -0.12
COPA-205ENST00000541366 ZNF316A6NFI3 1004 aaPredicted RBP14.29□□□□□ -0.12
COPA-205ENST00000541366 WDR46O15213 610 aaKnown RBP14.29□□□□□ -0.12
COPA-205ENST00000541366 IPO8O15397 1037 aaKnown RBP14.29□□□□□ -0.12
COPA-205ENST00000541366 PRKAB2O43741 272 aa14.29□□□□□ -0.12
COPA-205ENST00000541366 PDE6AP16499 860 aa14.29□□□□□ -0.12
COPA-205ENST00000541366 STAT3P40763 770 aa14.29□□□□□ -0.12
COPA-205ENST00000541366 CDK7P50613 346 aa14.29□□□□□ -0.12
COPA-205ENST00000541366 PPIGQ13427 754 aaKnown RBP eCLIP14.29□□□□□ -0.123e-7■■■□□ 16.4
COPA-205ENST00000541366 SLFNL1Q499Z3 407 aa14.29□□□□□ -0.12
COPA-205ENST00000541366 SLC9C2Q5TAH2 1124 aa14.29□□□□□ -0.12
COPA-205ENST00000541366 REPS2Q8NFH8 660 aa14.29□□□□□ -0.12
COPA-205ENST00000541366 NUP133Q8WUM0 1156 aa14.29□□□□□ -0.12
COPA-205ENST00000541366 ZHX1Q9UKY1 873 aaPredicted RBP14.29□□□□□ -0.12
COPA-205ENST00000541366 ZNF214Q9UL59 606 aaPredicted RBP14.29□□□□□ -0.12
COPA-205ENST00000541366 DIS3Q9Y2L1 958 aaKnown RBP14.29□□□□□ -0.12
COPA-205ENST00000541366 YBX2Q9Y2T7 364 aaKnown RBP14.29□□□□□ -0.12
COPA-205ENST00000541366 MOXD2PA6NHM9 499 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 APBB1O00213 710 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 VWA5AO00534 786 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 RAD21O60216 631 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 MCM3APO60318 1980 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 EEF2P13639 858 aaKnown RBP14.28□□□□□ -0.12
COPA-205ENST00000541366 CYP2C18P33260 490 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 TFF2Q03403 129 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 FAM83BQ5T0W9 1011 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 VTI1AQ96AJ9 217 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 ARMT1Q9H993 441 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 ZNF532Q9HCE3 1301 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 BAZ2AQ9UIF9 1905 aaKnown RBP14.28□□□□□ -0.12
COPA-205ENST00000541366 FAM184BQ9ULE4 1060 aa14.28□□□□□ -0.12
COPA-205ENST00000541366 ASGR1P07306 291 aa14.27□□□□□ -0.13
COPA-205ENST00000541366 C6orf222P0C671 652 aaPredicted RBP14.27□□□□□ -0.13
COPA-205ENST00000541366 AACSQ86V21 672 aa14.27□□□□□ -0.13
COPA-205ENST00000541366 MICALL1Q8N3F8 863 aa14.27□□□□□ -0.13
COPA-205ENST00000541366 GLT1D1Q96MS3 346 aa14.27□□□□□ -0.13
COPA-205ENST00000541366 MSRAQ9UJ68 235 aa14.27□□□□□ -0.13
COPA-205ENST00000541366 PPP1R9AQ9ULJ8 1098 aa14.27□□□□□ -0.13
COPA-205ENST00000541366 EXOC6BQ9Y2D4 811 aa14.27□□□□□ -0.13
COPA-205ENST00000541366 RIPK3Q9Y572 518 aa14.27□□□□□ -0.13
COPA-205ENST00000541366 UMODL1Q5DID0 1318 aa14.26□□□□□ -0.13
COPA-205ENST00000541366 TCRBV5S4A2TA0A5A2 114 aa14.26□□□□□ -0.13
COPA-205ENST00000541366 DUSP11O75319 330 aaKnown RBP14.26□□□□□ -0.13
COPA-205ENST00000541366 SLC4A3P48751 1232 aa14.26□□□□□ -0.13
COPA-205ENST00000541366 CDK8P49336 464 aa14.26□□□□□ -0.13
COPA-205ENST00000541366 FAM126BQ8IXS8 530 aa14.26□□□□□ -0.13
COPA-205ENST00000541366 TMEM199Q8N511 208 aa14.26□□□□□ -0.13
COPA-205ENST00000541366 NUP88Q99567 741 aaPredicted RBP14.26□□□□□ -0.13
COPA-205ENST00000541366 SH2D4AQ9H788 454 aa14.26□□□□□ -0.13
COPA-205ENST00000541366 IL1RAPL2Q9NP60 686 aa14.26□□□□□ -0.13
COPA-205ENST00000541366 SWAP70Q9UH65 585 aa14.26□□□□□ -0.13
COPA-205ENST00000541366 PRRC2BQ5JSZ5 2229 aaKnown RBP14.26□□□□□ -0.13
COPA-205ENST00000541366 ELP1O95163 1332 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 A0A0U1RQG5 324 aaPredicted RBP14.25□□□□□ -0.13
COPA-205ENST00000541366 ARVCFO00192 962 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 GOLIM4O00461 696 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 CHGBP05060 677 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 BMP1P13497 986 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 MYOGP15173 224 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 KCNQ1P51787 676 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 RABGGTBP53611 331 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 ACVR2BQ13705 512 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 PSRC1Q6PGN9 363 aaPredicted RBP14.25□□□□□ -0.13
COPA-205ENST00000541366 OTOP2Q7RTS6 562 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 HERVK_113Q902F9 699 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 DNAJC2Q99543 621 aaKnown RBP14.25□□□□□ -0.13
COPA-205ENST00000541366 IL23AQ9NPF7 189 aa14.25□□□□□ -0.13
COPA-205ENST00000541366 MROH7Q68CQ1 1323 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 DNAJC25-GNG10A0A024R161 153 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 CTAGE5O15320 804 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 PTGS1P23219 599 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 CST5P28325 142 aaPredicted RBP14.24□□□□□ -0.13
COPA-205ENST00000541366 BEX3Q00994 111 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 RAB30Q15771 203 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 CCDC144BQ3MJ40 725 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 GNASQ5JWF2 1037 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 SNRNP48Q6IEG0 339 aaKnown RBP14.24□□□□□ -0.13
COPA-205ENST00000541366 CCDC174Q6PII3 467 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 MAMDC4Q6UXC1 1216 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 DDX11Q96FC9 970 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 FGD4Q96M96 766 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 BCL11AQ9H165 835 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 SLC28A3Q9HAS3 691 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.24□□□□□ -0.13
COPA-205ENST00000541366 TRANK1O15050 2925 aa14.24□□□□□ -0.13
COPA-205ENST00000541366 USP17L12C9JPN9 530 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 USP17L21D6R901 530 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 RFXAPO00287 272 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 MBD4O95243 580 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 CD4P01730 458 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 FGBP02675 491 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 CCL23P55773 120 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 GJA9P57773 515 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 C12orf60Q5U649 245 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 TMED8Q6PL24 325 aaPredicted RBP14.23□□□□□ -0.13
COPA-205ENST00000541366 C16orf86Q6ZW13 317 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 CPXCR1Q8N123 301 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms