RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ZCCHC17Q9NP64 241 aaKnown RBP10.8□□□□□ -0.68
CNOT4-212ENST00000541284 IL17RBQ9NRM6 502 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 GTPBP6O43824 516 aaPredicted RBP10.8□□□□□ -0.68
CNOT4-212ENST00000541284 ADAMTS2O95450 1211 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 COPB1P53618 953 aaKnown RBP10.8□□□□□ -0.68
CNOT4-212ENST00000541284 ST5P78524 1137 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 PIK3AP1Q6ZUJ8 805 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 CPLX3Q8WVH0 158 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 ACSBG1Q96GR2 724 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 CDC23Q9UJX2 597 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 GDAQ9Y2T3 454 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 RASSF10A6NK89 507 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 CCT6AP40227 531 aaKnown RBP10.8□□□□□ -0.68
CNOT4-212ENST00000541284 TRAPPC10P48553 1259 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 FAM98CQ17RN3 349 aaKnown RBP10.8□□□□□ -0.68
CNOT4-212ENST00000541284 SBK1Q52WX2 424 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 TCP11X2Q5H9J9 407 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 BEND6Q5SZJ8 279 aaPredicted RBP10.8□□□□□ -0.68
CNOT4-212ENST00000541284 ZNF507Q8TCN5 953 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 GOLGA1Q92805 767 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 CCDC51Q96ER9 411 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 ARGLU1Q9NWB6 273 aaPredicted RBP10.8□□□□□ -0.68
CNOT4-212ENST00000541284 ZNF658Q5TYW1 1059 aaPredicted RBP10.79□□□□□ -0.68
CNOT4-212ENST00000541284 HNRNPLLQ8WVV9 542 aaKnown RBP10.79□□□□□ -0.68
CNOT4-212ENST00000541284 CTAGE1Q96RT6 745 aa10.79□□□□□ -0.68
CNOT4-212ENST00000541284 MYH4Q9Y623 1939 aa10.79□□□□□ -0.68
CNOT4-212ENST00000541284 XBP1P17861 261 aa10.79□□□□□ -0.68
CNOT4-212ENST00000541284 PRCPP42785 496 aa10.79□□□□□ -0.68
CNOT4-212ENST00000541284 SLC35F6Q8N357 371 aa10.79□□□□□ -0.68
CNOT4-212ENST00000541284 CCDC151A5D8V7 595 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 PRDX5P30044 214 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 NOVP48745 357 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 LONRF2Q1L5Z9 754 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 WDR59Q6PJI9 974 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 ANKRD18AQ8IVF6 992 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 PROM2Q8N271 834 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 FLT1P17948 1338 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 RPN1P04843 607 aaKnown RBP10.78□□□□□ -0.68
CNOT4-212ENST00000541284 OAS2P29728 719 aaKnown RBP10.78□□□□□ -0.68
CNOT4-212ENST00000541284 CHMP4BP1P59074 171 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 SMIM5Q71RC9 77 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 TXNRD3Q86VQ6 643 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 IQCA1Q86XH1 822 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 CNGA4Q8IV77 575 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 ADSSL1Q8N142 457 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 STAG2Q8N3U4 1231 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 IQUBQ8NA54 791 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 NELFBQ8WX92 580 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 ANKS1AQ92625 1134 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 CHP1Q99653 195 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 TMEM60Q9H2L4 133 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 TAB2Q9NYJ8 693 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 TRIM49BA6NDI0 452 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 NKRFO15226 690 aaKnown RBP eCLIP10.78□□□□□ -0.68
CNOT4-212ENST00000541284 CYTH3O43739 400 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 MCM7P33993 719 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 AKAP17AQ02040 695 aaKnown RBP10.78□□□□□ -0.68
CNOT4-212ENST00000541284 ARL6IP4Q66PJ3 421 aaKnown RBP10.78□□□□□ -0.68
CNOT4-212ENST00000541284 PPFIBP1Q86W92 1011 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 TTYH3Q9C0H2 523 aa10.78□□□□□ -0.68
CNOT4-212ENST00000541284 PP2D1A8MPX8 630 aa10.77□□□□□ -0.68
CNOT4-212ENST00000541284 KCNJ18B7U540 433 aa10.77□□□□□ -0.68
CNOT4-212ENST00000541284 PAK1Q13153 545 aa10.77□□□□□ -0.68
CNOT4-212ENST00000541284 KCNJ12Q14500 433 aa10.77□□□□□ -0.68
CNOT4-212ENST00000541284 SMC1AQ14683 1233 aaKnown RBP10.77□□□□□ -0.68
CNOT4-212ENST00000541284 RRAGBQ5VZM2 374 aa10.77□□□□□ -0.68
CNOT4-212ENST00000541284 VPS16Q9H269 839 aa10.77□□□□□ -0.68
CNOT4-212ENST00000541284 TRIM10Q9UDY6 481 aa10.77□□□□□ -0.68
CNOT4-212ENST00000541284 HERVK_113P62684 666 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 ZNF569Q5MCW4 686 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 RASGRP4Q8TDF6 673 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 MAD2L2Q9UI95 211 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 ADRA2BP18089 450 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 LONP1P36776 959 aaKnown RBP10.77□□□□□ -0.69
CNOT4-212ENST00000541284 BRD3Q15059 726 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 TMTC1Q8IUR5 882 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 MSL3Q8N5Y2 521 aaKnown RBP10.77□□□□□ -0.69
CNOT4-212ENST00000541284 CCDC34Q96HJ3 373 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 DNAJC7Q99615 494 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 ZSWIM4Q9H7M6 989 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 DISC1Q9NRI5 854 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 PUF60Q9UHX1 559 aaKnown RBP10.77□□□□□ -0.69
CNOT4-212ENST00000541284 TTF2Q9UNY4 1162 aaKnown RBP10.77□□□□□ -0.69
CNOT4-212ENST00000541284 ATAD5Q96QE3 1844 aa10.77□□□□□ -0.69
CNOT4-212ENST00000541284 GPKOWQ92917 476 aaPredicted RBP eCLIP10.76□□□□□ -0.693e-6■■■■□ 20.4
CNOT4-212ENST00000541284 DUSP9Q99956 384 aaKnown RBP10.76□□□□□ -0.69
CNOT4-212ENST00000541284 SUGCTQ9HAC7 445 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 ARFGAP3Q9NP61 516 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 ATP8A2Q9NTI2 1148 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 GNL3LQ9NVN8 582 aaKnown RBP10.76□□□□□ -0.69
CNOT4-212ENST00000541284 L1RE1Q9UN81 338 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 ERICH4A6NGS2 130 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 POLR3GO15318 223 aaPredicted RBP10.76□□□□□ -0.69
CNOT4-212ENST00000541284 TTI2Q6NXR4 508 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 BLIDQ8IZY5 108 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 NOA1Q8NC60 698 aaKnown RBP10.76□□□□□ -0.69
CNOT4-212ENST00000541284 DAGLBQ8NCG7 672 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 SH3GLB2Q9NR46 395 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 KBTBD4Q9NVX7 518 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 PCDHA6Q9UN73 950 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms