RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 TTC26A0AVF1 554 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 RCCD1A6NED2 376 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 WNT7AO00755 349 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 IFIT3O14879 490 aaKnown RBP16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 EIF3HO15372 352 aaKnown RBP eCLIP16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 ADD2P35612 726 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 PPARAQ07869 468 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 VPS54Q9P1Q0 977 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 ZSWIM5Q9P217 1185 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 PES1O00541 588 aaKnown RBP16.66■□□□□ 0.26
AC005840.4-201ENST00000541242 UBXN1Q04323 297 aa16.66■□□□□ 0.26
AC005840.4-201ENST00000541242 EARS2Q5JPH6 523 aaKnown RBP16.66■□□□□ 0.26
AC005840.4-201ENST00000541242 RRAGBQ5VZM2 374 aa16.66■□□□□ 0.26
AC005840.4-201ENST00000541242 ZNF579Q8NAF0 562 aaKnown RBP16.66■□□□□ 0.26
AC005840.4-201ENST00000541242 AIDAQ96BJ3 306 aa16.66■□□□□ 0.26
AC005840.4-201ENST00000541242 SHTN1A0MZ66 631 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 CAMTA2O94983 1202 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 FGFR2P21802 821 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 MCM3P25205 808 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 ZNF512BQ96KM6 892 aaPredicted RBP16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 CDCA7Q9BWT1 371 aaPredicted RBP16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 LACRTQ9GZZ8 138 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 CHD4Q14839 1912 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 TARSL2A2RTX5 802 aaKnown RBP16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 KCNQ2O43526 872 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 IDH1O75874 414 aaKnown RBP16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 HSPA1LP34931 641 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 SLC7A5Q01650 507 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 PDCLQ13371 301 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 PAPD7Q5XG87 772 aaKnown RBP16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 SH3RF1Q7Z6J0 888 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 ARL8AQ96BM9 186 aa16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 JPH2Q9BR39 696 aaPredicted RBP16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 LIMA1Q9UHB6 759 aaKnown RBP16.65■□□□□ 0.26
AC005840.4-201ENST00000541242 hCG_1642624A0A1W2PR95 340 aa16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 KCNJ18B7U540 433 aa16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 KCNJ12Q14500 433 aa16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 RRP12Q5JTH9 1297 aaKnown RBP16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 ANKRD18AQ8IVF6 992 aa16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 SHISA4Q96DD7 197 aa16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 TMEM87BQ96K49 555 aa16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 FOXP1Q9H334 677 aaPredicted RBP16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 HAUS4Q9H6D7 363 aa16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 JADE2Q9NQC1 790 aa16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 DMGDHQ9UI17 866 aaKnown RBP16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 THRAP3Q9Y2W1 955 aaKnown RBP16.64■□□□□ 0.26
AC005840.4-201ENST00000541242 SEMA3EO15041 775 aa16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 IFNAR1P17181 557 aa16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 ARID4AP29374 1257 aaPredicted RBP16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 MATR3P43243 847 aaKnown RBP eCLIP16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 ATP1A2P50993 1020 aa16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 TTF1Q15361 905 aaPredicted RBP16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 TCP11X2Q5H9J9 407 aa16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 WDR59Q6PJI9 974 aa16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 KIAA1328Q86T90 577 aa16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 SH2D3CQ8N5H7 860 aa16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 AENQ8WTP8 325 aaKnown RBP16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 SPATA31A5Q5VU36 1347 aa16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 SPATA31A7Q8IWB4 1347 aa16.64■□□□□ 0.25
AC005840.4-201ENST00000541242 MACROD2A1Z1Q3 448 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 CCDC172P0C7W6 258 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 PUM3Q15397 648 aaKnown RBP16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 TTMPQ5BVD1 217 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 SGMS1Q86VZ5 419 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 CNPY4Q8N129 248 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 TSEN2Q8NCE0 465 aaKnown RBP16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 ZNF532Q9HCE3 1301 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 STK36Q9NRP7 1315 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 KCTD16Q68DU8 428 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 SMCR8Q8TEV9 937 aaPredicted RBP16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 LPIN2Q92539 896 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 GSDMAQ96QA5 445 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 LRRC1Q9BTT6 524 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 SMARCAL1Q9NZC9 954 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 LRP5O75197 1615 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 XDHP47989 1333 aa16.63■□□□□ 0.25
AC005840.4-201ENST00000541242 TRIM49BA6NDI0 452 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 H0YHG0 523 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 IDEP14735 1019 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 NUP133Q8WUM0 1156 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 CD248Q9HCU0 757 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 AATFQ9NY61 560 aaKnown RBP eCLIP16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 FAM184BQ9ULE4 1060 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 MROH5Q6ZUA9 1318 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 TCRBV5S4A2TA0A5A2 114 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 LRRC10BA6NIK2 292 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 NDUFAB1O14561 156 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 PDE6AP16499 860 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 IBSPP21815 317 aaPredicted RBP16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 CYP27A1Q02318 531 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 PPARDQ03181 441 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 CKAP4Q07065 602 aaKnown RBP16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 TRIM22Q8IYM9 498 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 PRPF38AQ8NAV1 312 aaKnown RBP16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 NELFBQ8WX92 580 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 PSMB7Q99436 277 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 SH3GL2Q99962 352 aa16.62■□□□□ 0.25
AC005840.4-201ENST00000541242 EHD2Q9NZN4 543 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms