RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 KIFC2Q96AC6 838 aa28.63■■■□□ 2.17
LEMD3-203ENST00000541171 ZNF287Q9HBT7 754 aa28.63■■■□□ 2.17
LEMD3-203ENST00000541171 PDLIM7Q9NR12 457 aa28.63■■■□□ 2.17
LEMD3-203ENST00000541171 PHF24Q9UPV7 400 aa28.63■■■□□ 2.17
LEMD3-203ENST00000541171 IGKV6D-41A0A0C4DH26 115 aa28.62■■■□□ 2.17
LEMD3-203ENST00000541171 AKR1A1P14550 325 aa28.62■■■□□ 2.17
LEMD3-203ENST00000541171 TLE2Q04725 743 aa28.62■■■□□ 2.17
LEMD3-203ENST00000541171 SHHQ15465 462 aa28.62■■■□□ 2.17
LEMD3-203ENST00000541171 IFNL3Q8IZI9 196 aa28.62■■■□□ 2.17
LEMD3-203ENST00000541171 FAM161BQ96MY7 647 aa28.62■■■□□ 2.17
LEMD3-203ENST00000541171 SEC62Q99442 399 aaKnown RBP28.62■■■□□ 2.17
LEMD3-203ENST00000541171 GREB1LQ9C091 1923 aaPredicted RBP28.62■■■□□ 2.17
LEMD3-203ENST00000541171 TRIM43BA6NCK2 446 aa28.61■■■□□ 2.17
LEMD3-203ENST00000541171 LRRFIP1Q32MZ4 808 aaKnown RBP28.61■■■□□ 2.17
LEMD3-203ENST00000541171 LRRC47Q8N1G4 583 aaKnown RBP28.61■■■□□ 2.17
LEMD3-203ENST00000541171 TRIM43Q96BQ3 446 aaPredicted RBP28.61■■■□□ 2.17
LEMD3-203ENST00000541171 CEP95Q96GE4 821 aa28.61■■■□□ 2.17
LEMD3-203ENST00000541171 RAVER2Q9HCJ3 691 aaKnown RBP28.61■■■□□ 2.17
LEMD3-203ENST00000541171 PLXNA1Q9UIW2 1896 aa28.6■■■□□ 2.17
LEMD3-203ENST00000541171 POTEB2H3BUK9 544 aa28.6■■■□□ 2.17
LEMD3-203ENST00000541171 C9orf50Q5SZB4 431 aa28.6■■■□□ 2.17
LEMD3-203ENST00000541171 C1orf53Q5VUE5 145 aa28.6■■■□□ 2.17
LEMD3-203ENST00000541171 MTMR4Q9NYA4 1195 aa28.6■■■□□ 2.17
LEMD3-203ENST00000541171 ISY1Q9ULR0 285 aaKnown RBP28.6■■■□□ 2.17
LEMD3-203ENST00000541171 OTUD7AQ8TE49 926 aaPredicted RBP28.59■■■□□ 2.17
LEMD3-203ENST00000541171 MKL1Q969V6 931 aa28.59■■■□□ 2.17
LEMD3-203ENST00000541171 FSD1Q9BTV5 496 aa28.59■■■□□ 2.17
LEMD3-203ENST00000541171 NACAP1Q9BZK3 213 aa28.59■■■□□ 2.17
LEMD3-203ENST00000541171 ZHX1Q9UKY1 873 aaPredicted RBP28.59■■■□□ 2.17
LEMD3-203ENST00000541171 LTBP2Q14767 1821 aa28.59■■■□□ 2.17
LEMD3-203ENST00000541171 ERC2O15083 957 aa28.58■■■□□ 2.17
LEMD3-203ENST00000541171 TTLL1O95922 423 aa28.58■■■□□ 2.17
LEMD3-203ENST00000541171 FEM1BQ9UK73 627 aa28.58■■■□□ 2.17
LEMD3-203ENST00000541171 PCDHB15Q9Y5E8 787 aa28.58■■■□□ 2.17
LEMD3-203ENST00000541171 TTC41PQ6P2S7 1318 aa28.58■■■□□ 2.17
LEMD3-203ENST00000541171 A0A1W2PQ45 241 aaPredicted RBP28.57■■■□□ 2.16
LEMD3-203ENST00000541171 A0A1W2PQY0 241 aa28.57■■■□□ 2.16
LEMD3-203ENST00000541171 SNAI1O95863 264 aaPredicted RBP28.57■■■□□ 2.16
LEMD3-203ENST00000541171 TSPY3P0CV98 308 aa28.57■■■□□ 2.16
LEMD3-203ENST00000541171 TSPY8P0CW00 308 aa28.57■■■□□ 2.16
LEMD3-203ENST00000541171 SLFN13Q68D06 897 aa28.57■■■□□ 2.16
LEMD3-203ENST00000541171 FAM109BQ6ICB4 259 aaPredicted RBP28.57■■■□□ 2.16
LEMD3-203ENST00000541171 MSL3Q8N5Y2 521 aaKnown RBP28.57■■■□□ 2.16
LEMD3-203ENST00000541171 CHMP4CQ96CF2 233 aa28.57■■■□□ 2.16
LEMD3-203ENST00000541171 SLC38A10Q9HBR0 1119 aa28.57■■■□□ 2.16
LEMD3-203ENST00000541171 FAM184BQ9ULE4 1060 aa28.57■■■□□ 2.16
LEMD3-203ENST00000541171 ATP2A1O14983 1001 aa28.56■■■□□ 2.16
LEMD3-203ENST00000541171 PQBP1O60828 265 aaKnown RBP28.56■■■□□ 2.16
LEMD3-203ENST00000541171 PDE4BQ07343 736 aa28.56■■■□□ 2.16
LEMD3-203ENST00000541171 ANKRD35Q8N283 1001 aa28.56■■■□□ 2.16
LEMD3-203ENST00000541171 PI4K2BQ8TCG2 481 aa28.56■■■□□ 2.16
LEMD3-203ENST00000541171 GUCD1Q96NT3 240 aa28.56■■■□□ 2.16
LEMD3-203ENST00000541171 SYNGAP1Q96PV0 1343 aa28.56■■■□□ 2.16
LEMD3-203ENST00000541171 NAPBQ9H115 298 aa28.56■■■□□ 2.16
LEMD3-203ENST00000541171 TACC3Q9Y6A5 838 aa28.56■■■□□ 2.16
LEMD3-203ENST00000541171 DNAJC25-GNG10A0A024R161 153 aa28.55■■■□□ 2.16
LEMD3-203ENST00000541171 ADAMTS4O75173 837 aa28.55■■■□□ 2.16
LEMD3-203ENST00000541171 SLC3A2P08195 630 aaKnown RBP28.55■■■□□ 2.16
LEMD3-203ENST00000541171 CLTBP09497 229 aa28.55■■■□□ 2.16
LEMD3-203ENST00000541171 TFAP4Q01664 338 aa28.55■■■□□ 2.16
LEMD3-203ENST00000541171 ZNF697Q5TEC3 545 aa28.55■■■□□ 2.16
LEMD3-203ENST00000541171 GMCL1P1Q8NEA9 526 aa28.55■■■□□ 2.16
LEMD3-203ENST00000541171 NEDD1Q8NHV4 660 aa28.55■■■□□ 2.16
LEMD3-203ENST00000541171 SYNRGQ9UMZ2 1314 aa28.54■■■□□ 2.16
LEMD3-203ENST00000541171 MYH4Q9Y623 1939 aa28.54■■■□□ 2.16
LEMD3-203ENST00000541171 BMP3P12645 472 aa28.54■■■□□ 2.16
LEMD3-203ENST00000541171 ITGB8P26012 769 aa28.54■■■□□ 2.16
LEMD3-203ENST00000541171 PPARAQ07869 468 aa28.54■■■□□ 2.16
LEMD3-203ENST00000541171 MAMDC4Q6UXC1 1216 aa28.54■■■□□ 2.16
LEMD3-203ENST00000541171 HOMER2Q9NSB8 354 aa28.54■■■□□ 2.16
LEMD3-203ENST00000541171 TMEM232C9JQI7 657 aa28.53■■■□□ 2.16
LEMD3-203ENST00000541171 ACLYP53396 1101 aa28.53■■■□□ 2.16
LEMD3-203ENST00000541171 ZMYM1Q5SVZ6 1142 aa28.53■■■□□ 2.16
LEMD3-203ENST00000541171 TSEN34Q9BSV6 310 aaKnown RBP28.53■■■□□ 2.16
LEMD3-203ENST00000541171 STARD7Q9NQZ5 370 aa28.53■■■□□ 2.16
LEMD3-203ENST00000541171 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.53■■■□□ 2.16
LEMD3-203ENST00000541171 FBXO40Q9UH90 709 aa28.53■■■□□ 2.16
LEMD3-203ENST00000541171 SYNPO2Q9UMS6 1093 aa28.53■■■□□ 2.16
LEMD3-203ENST00000541171 RAG1P15918 1043 aa28.52■■■□□ 2.16
LEMD3-203ENST00000541171 ACVR2BQ13705 512 aa28.52■■■□□ 2.16
LEMD3-203ENST00000541171 KCNA10Q16322 511 aa28.52■■■□□ 2.16
LEMD3-203ENST00000541171 ZNF467Q7Z7K2 595 aaPredicted RBP28.52■■■□□ 2.16
LEMD3-203ENST00000541171 CHST13Q8NET6 341 aa28.52■■■□□ 2.16
LEMD3-203ENST00000541171 TMEM39AQ9NV64 488 aa28.52■■■□□ 2.16
LEMD3-203ENST00000541171 IRX5P78411 483 aaPredicted RBP28.51■■■□□ 2.15
LEMD3-203ENST00000541171 IKQ13123 557 aaPredicted RBP28.51■■■□□ 2.15
LEMD3-203ENST00000541171 CCDC129Q6ZRS4 1044 aa28.51■■■□□ 2.15
LEMD3-203ENST00000541171 NUP133Q8WUM0 1156 aa28.51■■■□□ 2.15
LEMD3-203ENST00000541171 MYADML2A6NDP7 307 aa28.5■■■□□ 2.15
LEMD3-203ENST00000541171 DUSP11O75319 330 aaKnown RBP28.5■■■□□ 2.15
LEMD3-203ENST00000541171 MX1P20591 662 aa28.5■■■□□ 2.15
LEMD3-203ENST00000541171 OAZ1P54368 228 aa28.5■■■□□ 2.15
LEMD3-203ENST00000541171 KLHDC9Q8NEP7 349 aa28.5■■■□□ 2.15
LEMD3-203ENST00000541171 PLIN4Q96Q06 1357 aa28.5■■■□□ 2.15
LEMD3-203ENST00000541171 MOXD2PA6NHM9 499 aa28.49■■■□□ 2.15
LEMD3-203ENST00000541171 KIAA0355O15063 1070 aa28.49■■■□□ 2.15
LEMD3-203ENST00000541171 C6orf222P0C671 652 aaPredicted RBP28.49■■■□□ 2.15
LEMD3-203ENST00000541171 MCCP23508 829 aa28.49■■■□□ 2.15
LEMD3-203ENST00000541171 STAT2P52630 851 aa28.49■■■□□ 2.15
LEMD3-203ENST00000541171 CTDSPL2Q05D32 466 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms