RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 FLRT1Q9NZU1 646 aa20.28■□□□□ 0.84
CACNA2D4-211ENST00000540728 SLC1A4P43007 532 aa20.27■□□□□ 0.84
CACNA2D4-211ENST00000540728 KCTD2Q14681 263 aa20.27■□□□□ 0.84
CACNA2D4-211ENST00000540728 TTC22Q5TAA0 569 aa20.27■□□□□ 0.84
CACNA2D4-211ENST00000540728 CHURC1Q8WUH1 139 aa20.27■□□□□ 0.84
CACNA2D4-211ENST00000540728 MMP19Q99542 508 aa20.27■□□□□ 0.84
CACNA2D4-211ENST00000540728 TEX13BQ9BXU2 312 aa20.27■□□□□ 0.84
CACNA2D4-211ENST00000540728 IL17RBQ9NRM6 502 aa20.27■□□□□ 0.84
CACNA2D4-211ENST00000540728 ZNF214Q9UL59 606 aaPredicted RBP20.27■□□□□ 0.84
CACNA2D4-211ENST00000540728 ALPK3Q96L96 1907 aa20.27■□□□□ 0.84
CACNA2D4-211ENST00000540728 TRIOBPQ9H2D6 2365 aa20.27■□□□□ 0.83
CACNA2D4-211ENST00000540728 ZNF213O14771 459 aa20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 FDX1P10109 184 aa20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 CNGA1P29973 690 aa20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 IKQ13123 557 aaPredicted RBP20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 AKNAD1Q5T1N1 836 aa20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 OLFML2BQ68BL8 750 aa20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 REPS2Q8NFH8 660 aa20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 GMCL1Q96IK5 515 aa20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 NBPF3Q9H094 633 aa20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 C11orf49Q9H6J7 331 aa20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 OGDHLQ9ULD0 1010 aa20.26■□□□□ 0.83
CACNA2D4-211ENST00000540728 TMEM232C9JQI7 657 aa20.25■□□□□ 0.83
CACNA2D4-211ENST00000540728 NMT2O60551 498 aa20.25■□□□□ 0.83
CACNA2D4-211ENST00000540728 CYP2C19P33261 490 aa20.25■□□□□ 0.83
CACNA2D4-211ENST00000540728 STAT2P52630 851 aa20.25■□□□□ 0.83
CACNA2D4-211ENST00000540728 SNRNP48Q6IEG0 339 aaKnown RBP20.25■□□□□ 0.83
CACNA2D4-211ENST00000540728 FAM160B2Q86V87 743 aa20.25■□□□□ 0.83
CACNA2D4-211ENST00000540728 CPXCR1Q8N123 301 aa20.25■□□□□ 0.83
CACNA2D4-211ENST00000540728 STAG1Q8WVM7 1258 aa20.25■□□□□ 0.83
CACNA2D4-211ENST00000540728 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
CACNA2D4-211ENST00000540728 ZNFX1Q9P2E3 1918 aaKnown RBP20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 ATP2A1O14983 1001 aa20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 MSCO60682 206 aa20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 COBLO75128 1261 aa20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 CENPBP07199 599 aaPredicted RBP20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 MCCP23508 829 aa20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 SLC4A3P48751 1232 aa20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 C7orf61Q8IZ16 206 aa20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 DSCC1Q9BVC3 393 aa20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 SLC38A10Q9HBR0 1119 aa20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 TCP11L1Q9NUJ3 509 aa20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 CTNNA3Q9UI47 895 aa20.24■□□□□ 0.83
CACNA2D4-211ENST00000540728 NT5C2P49902 561 aa20.23■□□□□ 0.83
CACNA2D4-211ENST00000540728 OAZ1P54368 228 aa20.23■□□□□ 0.83
CACNA2D4-211ENST00000540728 RCSD1Q6JBY9 416 aa20.23■□□□□ 0.83
CACNA2D4-211ENST00000540728 RUFY2Q8WXA3 655 aa20.23■□□□□ 0.83
CACNA2D4-211ENST00000540728 ESR2Q92731 530 aa20.23■□□□□ 0.83
CACNA2D4-211ENST00000540728 CHMP4CQ96CF2 233 aa20.23■□□□□ 0.83
CACNA2D4-211ENST00000540728 TOP1P11387 765 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 GSPT1P15170 499 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 MNX1P50219 401 aaPredicted RBP20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 IMMTQ16891 758 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 DCAF4Q8WV16 495 aa20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 DDX11Q96FC9 970 aa20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 MAML3Q96JK9 1138 aa20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 RAVER2Q9HCJ3 691 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 FBXO40Q9UH90 709 aa20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 DDX20Q9UHI6 824 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 MTMR7Q9Y216 660 aa20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 DIS3Q9Y2L1 958 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-211ENST00000540728 PLA2G6O60733 806 aa20.21■□□□□ 0.83
CACNA2D4-211ENST00000540728 PGK2P07205 417 aa20.21■□□□□ 0.83
CACNA2D4-211ENST00000540728 NOVP48745 357 aa20.21■□□□□ 0.83
CACNA2D4-211ENST00000540728 CCDC96Q2M329 555 aa20.21■□□□□ 0.83
CACNA2D4-211ENST00000540728 LHX8Q68G74 356 aa20.21■□□□□ 0.83
CACNA2D4-211ENST00000540728 KCTD1Q719H9 257 aa20.21■□□□□ 0.83
CACNA2D4-211ENST00000540728 TBC1D10CQ8IV04 446 aa20.21■□□□□ 0.83
CACNA2D4-211ENST00000540728 TTC14Q96N46 770 aa20.21■□□□□ 0.83
CACNA2D4-211ENST00000540728 RAD50Q92878 1312 aa20.21■□□□□ 0.83
CACNA2D4-211ENST00000540728 CYBAP13498 195 aa20.2■□□□□ 0.82
CACNA2D4-211ENST00000540728 CCDC178Q5BJE1 867 aa20.2■□□□□ 0.82
CACNA2D4-211ENST00000540728 CHST13Q8NET6 341 aa20.2■□□□□ 0.82
CACNA2D4-211ENST00000540728 TMEM47Q9BQJ4 181 aa20.2■□□□□ 0.82
CACNA2D4-211ENST00000540728 PFASO15067 1338 aa20.2■□□□□ 0.82
CACNA2D4-211ENST00000540728 IGHA2P01877 340 aa20.19■□□□□ 0.82
CACNA2D4-211ENST00000540728 IQCA1Q86XH1 822 aa20.19■□□□□ 0.82
CACNA2D4-211ENST00000540728 TRPV1Q8NER1 839 aa20.19■□□□□ 0.82
CACNA2D4-211ENST00000540728 RBM27Q9P2N5 1060 aaKnown RBP20.19■□□□□ 0.82
CACNA2D4-211ENST00000540728 ZMYND8Q9ULU4 1186 aaPredicted RBP20.19■□□□□ 0.82
CACNA2D4-211ENST00000540728 RIPK3Q9Y572 518 aa20.19■□□□□ 0.82
CACNA2D4-211ENST00000540728 MYCNP04198 464 aaPredicted RBP20.18■□□□□ 0.82
CACNA2D4-211ENST00000540728 FXR1P51114 621 aaKnown RBP eCLIP20.18■□□□□ 0.82
CACNA2D4-211ENST00000540728 ZNF792Q3KQV3 632 aa20.18■□□□□ 0.82
CACNA2D4-211ENST00000540728 ANKRD35Q8N283 1001 aa20.18■□□□□ 0.82
CACNA2D4-211ENST00000540728 TINF2Q9BSI4 451 aa20.18■□□□□ 0.82
CACNA2D4-211ENST00000540728 NRBP1Q9UHY1 535 aa20.18■□□□□ 0.82
CACNA2D4-211ENST00000540728 NEDD4P46934 1319 aa20.18■□□□□ 0.82
CACNA2D4-211ENST00000540728 LAMA4Q16363 1823 aa20.18■□□□□ 0.82
CACNA2D4-211ENST00000540728 PLXNA1Q9UIW2 1896 aa20.18■□□□□ 0.82
CACNA2D4-211ENST00000540728 RANBP2P49792 3224 aaKnown RBP20.17■□□□□ 0.82
CACNA2D4-211ENST00000540728 SEPT4O43236 478 aa20.17■□□□□ 0.82
CACNA2D4-211ENST00000540728 KDM4AO75164 1064 aa20.17■□□□□ 0.82
CACNA2D4-211ENST00000540728 CHMLP26374 656 aa20.17■□□□□ 0.82
CACNA2D4-211ENST00000540728 TKFCQ3LXA3 575 aa20.17■□□□□ 0.82
CACNA2D4-211ENST00000540728 ANO1Q5XXA6 986 aa20.17■□□□□ 0.82
CACNA2D4-211ENST00000540728 KRT23Q9C075 422 aa20.17■□□□□ 0.82
CACNA2D4-211ENST00000540728 CNNM2Q9H8M5 875 aa20.17■□□□□ 0.82
CACNA2D4-211ENST00000540728 HOMER2Q9NSB8 354 aa20.17■□□□□ 0.82
CACNA2D4-211ENST00000540728 PRR12Q9ULL5 1215 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms