RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 TRIM33Q9UPN9 1127 aa5.32□□□□□ -1.56
TSG101-205ENST00000540555 CDH23Q9H251 3354 aa5.32□□□□□ -1.56
TSG101-205ENST00000540555 KRTAP9-6A0A140TA67 174 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 MSTNO14793 375 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 LDHBP07195 334 aaKnown RBP5.31□□□□□ -1.56
TSG101-205ENST00000540555 CEP135Q66GS9 1140 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 DLK2Q6UY11 383 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 KRT26Q7Z3Y9 468 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 TMEM102Q8N9M5 508 aaPredicted RBP5.31□□□□□ -1.56
TSG101-205ENST00000540555 RGS22Q8NE09 1264 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 TCF12Q99081 682 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 R3HDMLQ9H3Y0 253 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 RNF19AQ9NV58 838 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 PODXL2Q9NZ53 605 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 TRIM17Q9Y577 477 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 ZNF609O15014 1411 aa5.31□□□□□ -1.56
TSG101-205ENST00000540555 PDE2AO00408 941 aaPredicted RBP5.3□□□□□ -1.56
TSG101-205ENST00000540555 SMNDC1O75940 238 aaKnown RBP eCLIP5.3□□□□□ -1.56
TSG101-205ENST00000540555 CAMTA2O94983 1202 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 BMP8BP34820 402 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 LRIT3Q3SXY7 679 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.3□□□□□ -1.56
TSG101-205ENST00000540555 AMOTQ4VCS5 1084 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 ALG1LQ6GMV1 187 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 CCNJLQ8IV13 435 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 NIM1KQ8IY84 436 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 BEND7Q8N7W2 519 aaPredicted RBP5.3□□□□□ -1.56
TSG101-205ENST00000540555 GLIS3Q8NEA6 775 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 FBF1Q8TES7 1133 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 DPF2Q92785 391 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 RTFDC1Q9BY42 306 aaPredicted RBP5.3□□□□□ -1.56
TSG101-205ENST00000540555 BHLHE41Q9C0J9 482 aaPredicted RBP5.3□□□□□ -1.56
TSG101-205ENST00000540555 ADAM19Q9H013 955 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 MKL2Q9ULH7 1088 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 ZNRF3Q9ULT6 936 aa5.3□□□□□ -1.56
TSG101-205ENST00000540555 PAPPA2Q9BXP8 1791 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 KIF7Q2M1P5 1343 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 ST20-MTHFSA0A0A6YYL1 179 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 PRPF40AO75400 957 aaKnown RBP5.29□□□□□ -1.56
TSG101-205ENST00000540555 HOXA10P31260 410 aaPredicted RBP5.29□□□□□ -1.56
TSG101-205ENST00000540555 IL6STP40189 918 aaPredicted RBP5.29□□□□□ -1.56
TSG101-205ENST00000540555 GRIA4P48058 902 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 MTHFSP49914 203 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 SREBF2Q12772 1141 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 GRM2Q14416 872 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 GDF6Q6KF10 455 aaPredicted RBP5.29□□□□□ -1.56
TSG101-205ENST00000540555 CLEC4GQ6UXB4 293 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 IL22RA1Q8N6P7 574 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 OSBPL7Q9BZF2 842 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 LACRTQ9GZZ8 138 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 SUV39H2Q9H5I1 410 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 RAPGEFL1Q9UHV5 662 aa5.29□□□□□ -1.56
TSG101-205ENST00000540555 CNOT7Q9UIV1 285 aaKnown RBP5.29□□□□□ -1.56
TSG101-205ENST00000540555 RPTORQ8N122 1335 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 SCN7AQ01118 1682 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 METTL12A8MUP2 240 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 ADM5C9JUS6 153 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 H7C1D1 291 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 GNB5O14775 395 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 TNIP1Q15025 636 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 SPRED3Q2MJR0 410 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 PLA2G4EQ3MJ16 856 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 PLEKHO1Q53GL0 409 aaPredicted RBP5.28□□□□□ -1.56
TSG101-205ENST00000540555 FAM109BQ6ICB4 259 aaPredicted RBP5.28□□□□□ -1.56
TSG101-205ENST00000540555 Q7L0L9 218 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 DMRTC2Q8IXT2 367 aaPredicted RBP5.28□□□□□ -1.56
TSG101-205ENST00000540555 SHISA4Q96DD7 197 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 CDCA5Q96FF9 252 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 ERO1AQ96HE7 468 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 DUSP9Q99956 384 aaKnown RBP5.28□□□□□ -1.56
TSG101-205ENST00000540555 GDF15Q99988 308 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 SPOCK3Q9BQ16 436 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 PLVAPQ9BX97 442 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 EHD4Q9H223 541 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 LIN7BQ9HAP6 207 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 SH2B1Q9NRF2 756 aaPredicted RBP5.28□□□□□ -1.56
TSG101-205ENST00000540555 SOX13Q9UN79 622 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 NR2E3Q9Y5X4 410 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 RIC1Q4ADV7 1423 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 RAB3GAP2Q9H2M9 1393 aa5.28□□□□□ -1.56
TSG101-205ENST00000540555 SHTN1A0MZ66 631 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 TM4SF5O14894 197 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 PPIP5K2O43314 1243 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 GADD45BO75293 160 aaPredicted RBP5.27□□□□□ -1.57
TSG101-205ENST00000540555 STARD3NLO95772 234 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 ITGB2P05107 769 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 PTPRAP18433 802 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 EPHA1P21709 976 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 COL8A1P27658 744 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 CANXP27824 592 aaKnown RBP5.27□□□□□ -1.57
TSG101-205ENST00000540555 CAP1Q01518 475 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 ATP2B2Q01814 1243 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 ZNF530Q6P9A1 599 aaPredicted RBP5.27□□□□□ -1.57
TSG101-205ENST00000540555 NXPE4Q6UWF7 544 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 TPTE2Q6XPS3 522 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 VN1R5Q7Z5H4 357 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 NBPF11Q86T75 865 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 NBPF5PQ86XG9 351 aaPredicted RBP5.27□□□□□ -1.57
TSG101-205ENST00000540555 CACTIN-AS1Q8N1I8 211 aa5.27□□□□□ -1.57
TSG101-205ENST00000540555 DPF3Q92784 378 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms