RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 FDX1P10109 184 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 OAZ1P54368 228 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 MCMDC2Q4G0Z9 681 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 PPP4R3BQ5MIZ7 849 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 MSL3Q8N5Y2 521 aaKnown RBP15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 GMCL1Q96IK5 515 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 TINF2Q9BSI4 451 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 IL17RBQ9NRM6 502 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 RIPK3Q9Y572 518 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 TACC3Q9Y6A5 838 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 ZMYM6O95789 1325 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 ORC4O43929 436 aa15.57■□□□□ 0.08
SEMA4D-223ENST00000540475 NUCB1Q02818 461 aa15.57■□□□□ 0.08
SEMA4D-223ENST00000540475 KCTD2Q14681 263 aa15.57■□□□□ 0.08
SEMA4D-223ENST00000540475 LRRC26Q2I0M4 334 aa15.57■□□□□ 0.08
SEMA4D-223ENST00000540475 FAM47AQ5JRC9 791 aa15.57■□□□□ 0.08
SEMA4D-223ENST00000540475 SLFN13Q68D06 897 aa15.57■□□□□ 0.08
SEMA4D-223ENST00000540475 C7orf61Q8IZ16 206 aa15.57■□□□□ 0.08
SEMA4D-223ENST00000540475 ARRDC4Q8NCT1 418 aa15.57■□□□□ 0.08
SEMA4D-223ENST00000540475 FAM227BQ96M60 508 aa15.57■□□□□ 0.08
SEMA4D-223ENST00000540475 LNPKQ9C0E8 428 aa15.57■□□□□ 0.08
SEMA4D-223ENST00000540475 A0A0D9SFI3 127 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 ZBED4O75132 1171 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 FGAP02671 866 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 BMP3P12645 472 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 CNGA1P29973 690 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 PRAMEF19Q5SWL8 479 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 MAMDC4Q6UXC1 1216 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 ZNF467Q7Z7K2 595 aaPredicted RBP15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 CHD1LQ86WJ1 897 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 PLEKHM2Q8IWE5 1019 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 LRRC47Q8N1G4 583 aaKnown RBP15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 INCENPQ9NQS7 918 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 MCM3APO60318 1980 aa15.56■□□□□ 0.08
SEMA4D-223ENST00000540475 RAD21O60216 631 aa15.55■□□□□ 0.08
SEMA4D-223ENST00000540475 PGK2P07205 417 aa15.55■□□□□ 0.08
SEMA4D-223ENST00000540475 ZNF865P0CJ78 1059 aaPredicted RBP15.55■□□□□ 0.08
SEMA4D-223ENST00000540475 HSPD1P10809 573 aaKnown RBP15.55■□□□□ 0.08
SEMA4D-223ENST00000540475 CTDSPL2Q05D32 466 aa15.55■□□□□ 0.08
SEMA4D-223ENST00000540475 SNX17Q15036 470 aa15.55■□□□□ 0.08
SEMA4D-223ENST00000540475 SNRNP48Q6IEG0 339 aaKnown RBP15.55■□□□□ 0.08
SEMA4D-223ENST00000540475 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
SEMA4D-223ENST00000540475 EXOC6Q8TAG9 804 aa15.55■□□□□ 0.08
SEMA4D-223ENST00000540475 TCP11L1Q9NUJ3 509 aa15.55■□□□□ 0.08
SEMA4D-223ENST00000540475 LAMA4Q16363 1823 aa15.54■□□□□ 0.08
SEMA4D-223ENST00000540475 SYNGAP1Q96PV0 1343 aa15.54■□□□□ 0.08
SEMA4D-223ENST00000540475 C1orf53Q5VUE5 145 aa15.54■□□□□ 0.08
SEMA4D-223ENST00000540475 FAM160B2Q86V87 743 aa15.54■□□□□ 0.08
SEMA4D-223ENST00000540475 CHST13Q8NET6 341 aa15.54■□□□□ 0.08
SEMA4D-223ENST00000540475 CHURC1Q8WUH1 139 aa15.54■□□□□ 0.08
SEMA4D-223ENST00000540475 STAG1Q8WVM7 1258 aa15.54■□□□□ 0.08
SEMA4D-223ENST00000540475 KIFC2Q96AC6 838 aa15.54■□□□□ 0.08
SEMA4D-223ENST00000540475 SENP6Q9GZR1 1112 aaPredicted RBP15.54■□□□□ 0.08
SEMA4D-223ENST00000540475 LTBP2Q14767 1821 aa15.54■□□□□ 0.08
SEMA4D-223ENST00000540475 ZNF536O15090 1300 aa15.53■□□□□ 0.08
SEMA4D-223ENST00000540475 TSPY2A6NKD2 308 aa15.53■□□□□ 0.08
SEMA4D-223ENST00000540475 PCP11498 1178 aaKnown RBP15.53■□□□□ 0.08
SEMA4D-223ENST00000540475 SDSP20132 328 aa15.53■□□□□ 0.08
SEMA4D-223ENST00000540475 STAT2P52630 851 aa15.53■□□□□ 0.08
SEMA4D-223ENST00000540475 NMIQ13287 307 aaPredicted RBP15.53■□□□□ 0.08
SEMA4D-223ENST00000540475 RCSD1Q6JBY9 416 aa15.53■□□□□ 0.08
SEMA4D-223ENST00000540475 ZNF589Q86UQ0 364 aaPredicted RBP15.53■□□□□ 0.08
SEMA4D-223ENST00000540475 FBXO40Q9UH90 709 aa15.53■□□□□ 0.08
SEMA4D-223ENST00000540475 ZMYND8Q9ULU4 1186 aaPredicted RBP15.53■□□□□ 0.08
SEMA4D-223ENST00000540475 CCDC171Q6TFL3 1326 aa15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 TMEM232C9JQI7 657 aa15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 NMT2O60551 498 aa15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 SNAI1O95863 264 aaPredicted RBP15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 MAGEA10P43363 369 aaPredicted RBP15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 NT5C2P49902 561 aa15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 LRRC41Q15345 812 aa15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 GJC2Q5T442 439 aaPredicted RBP15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 B4GALNT3Q6L9W6 998 aa15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 SLC39A5Q6ZMH5 540 aa15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 CPXCR1Q8N123 301 aa15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 FGD4Q96M96 766 aa15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 RAVER2Q9HCJ3 691 aaKnown RBP15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 STX8Q9UNK0 236 aa15.52■□□□□ 0.08
SEMA4D-223ENST00000540475 COL6A3P12111 3177 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 LCTP09848 1927 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 TRIM6-TRIM34B2RNG4 842 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 RANBP6O60518 1105 aaKnown RBP15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 TAL1P17542 331 aaPredicted RBP15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 SYN1P17600 705 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 MCCP23508 829 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 SLC1A4P43007 532 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 TKFCQ3LXA3 575 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 BTNL9Q6UXG8 535 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 DDX11Q96FC9 970 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 TTC14Q96N46 770 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 PHF24Q9UPV7 400 aa15.51■□□□□ 0.07
SEMA4D-223ENST00000540475 KBTBD13C9JR72 458 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 ADAMTS4O75173 837 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 RARBP10826 455 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 AKR1A1P14550 325 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 MFAP1P55081 439 aaKnown RBP15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 LRIT3Q3SXY7 679 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 ANO1Q5XXA6 986 aa15.5■□□□□ 0.07
SEMA4D-223ENST00000540475 GPR153Q6NV75 609 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms