RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 NYAP2Q9P242 653 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 ZNFX1Q9P2E3 1918 aaKnown RBP14.94□□□□□ -0.02
COPS7A-211ENST00000540408 MINDY4BA8MYZ0 360 aa14.93□□□□□ -0.02
COPS7A-211ENST00000540408 FOSL2P15408 326 aa14.93□□□□□ -0.02
COPS7A-211ENST00000540408 CCDC174Q6PII3 467 aa14.93□□□□□ -0.02
COPS7A-211ENST00000540408 ANKRD33Q7Z3H0 272 aa14.93□□□□□ -0.02
COPS7A-211ENST00000540408 ZNF444Q8N0Y2 327 aaPredicted RBP14.93□□□□□ -0.02
COPS7A-211ENST00000540408 REPS2Q8NFH8 660 aa14.93□□□□□ -0.02
COPS7A-211ENST00000540408 MYLIPQ8WY64 445 aa14.93□□□□□ -0.02
COPS7A-211ENST00000540408 GLT1D1Q96MS3 346 aa14.93□□□□□ -0.02
COPS7A-211ENST00000540408 ZHX1Q9UKY1 873 aaPredicted RBP14.93□□□□□ -0.02
COPS7A-211ENST00000540408 ROBO3Q96MS0 1386 aa14.93□□□□□ -0.02
COPS7A-211ENST00000540408 BAZ2AQ9UIF9 1905 aaKnown RBP14.93□□□□□ -0.02
COPS7A-211ENST00000540408 MROH7Q68CQ1 1323 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.92□□□□□ -0.02
COPS7A-211ENST00000540408 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.92□□□□□ -0.02
COPS7A-211ENST00000540408 ADAMTS4O75173 837 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 DUSP11O75319 330 aaKnown RBP14.92□□□□□ -0.02
COPS7A-211ENST00000540408 RASA1P20936 1047 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 ITGB8P26012 769 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 KCNA10Q16322 511 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 MAMDC4Q6UXC1 1216 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 ZNF467Q7Z7K2 595 aaPredicted RBP14.92□□□□□ -0.02
COPS7A-211ENST00000540408 CPXCR1Q8N123 301 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 STK11IPQ8N1F8 1099 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 ANKRD35Q8N283 1001 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 PCSK9Q8NBP7 692 aaKnown RBP14.92□□□□□ -0.02
COPS7A-211ENST00000540408 SYMPKQ92797 1274 aaKnown RBP14.92□□□□□ -0.02
COPS7A-211ENST00000540408 VTI1AQ96AJ9 217 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 GPATCH3Q96I76 525 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 STRBPQ96SI9 672 aaKnown RBP14.92□□□□□ -0.02
COPS7A-211ENST00000540408 NUP88Q99567 741 aaPredicted RBP14.92□□□□□ -0.02
COPS7A-211ENST00000540408 TTYH1Q9H313 450 aaPredicted RBP14.92□□□□□ -0.02
COPS7A-211ENST00000540408 CLIP2Q9UDT6 1046 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 FBXO40Q9UH90 709 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 SMCHD1A6NHR9 2005 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 SYNRGQ9UMZ2 1314 aa14.92□□□□□ -0.02
COPS7A-211ENST00000540408 ATP2A1O14983 1001 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 CHGBP05060 677 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 APPP05067 770 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 GNAT2P19087 354 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 FAAP100Q0VG06 881 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 ACVR2BQ13705 512 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 LRRFIP1Q32MZ4 808 aaKnown RBP14.91□□□□□ -0.02
COPS7A-211ENST00000540408 MIER1Q8N108 512 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 KLHDC9Q8NEP7 349 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 KIFC2Q96AC6 838 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.91□□□□□ -0.02
COPS7A-211ENST00000540408 ABHD16BQ9H3Z7 469 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 ECHDC1Q9NTX5 307 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 FEM1BQ9UK73 627 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 COL11A1P12107 1806 aaPredicted RBP14.91□□□□□ -0.02
COPS7A-211ENST00000540408 ELP1O95163 1332 aa14.91□□□□□ -0.02
COPS7A-211ENST00000540408 DNAJC25-GNG10A0A024R161 153 aa14.9□□□□□ -0.02
COPS7A-211ENST00000540408 GSG1L2A8MUP6 293 aa14.9□□□□□ -0.02
COPS7A-211ENST00000540408 SNAI1O95863 264 aaPredicted RBP14.9□□□□□ -0.02
COPS7A-211ENST00000540408 NDUFB10O96000 172 aa14.9□□□□□ -0.02
COPS7A-211ENST00000540408 TIMP1P01033 207 aa14.9□□□□□ -0.02
COPS7A-211ENST00000540408 ZFYP08048 801 aaPredicted RBP14.9□□□□□ -0.02
COPS7A-211ENST00000540408 C6orf222P0C671 652 aaPredicted RBP14.9□□□□□ -0.02
COPS7A-211ENST00000540408 TDO2P48775 406 aa14.9□□□□□ -0.02
COPS7A-211ENST00000540408 KBTBD3Q8NAB2 608 aa14.9□□□□□ -0.02
COPS7A-211ENST00000540408 CHST13Q8NET6 341 aa14.9□□□□□ -0.02
COPS7A-211ENST00000540408 APPBP2Q92624 585 aa14.9□□□□□ -0.02
COPS7A-211ENST00000540408 LENG1Q96BZ8 264 aaPredicted RBP14.9□□□□□ -0.02
COPS7A-211ENST00000540408 SYNPO2Q9UMS6 1093 aa14.9□□□□□ -0.02
COPS7A-211ENST00000540408 RIPK3Q9Y572 518 aa14.9□□□□□ -0.02
COPS7A-211ENST00000540408 PARP14Q460N5 1801 aa14.89□□□□□ -0.03
COPS7A-211ENST00000540408 PLXNA1Q9UIW2 1896 aa14.89□□□□□ -0.03
COPS7A-211ENST00000540408 TLR3O15455 904 aaKnown RBP14.89□□□□□ -0.03
COPS7A-211ENST00000540408 FDX1P10109 184 aa14.89□□□□□ -0.03
COPS7A-211ENST00000540408 EPHB4P54760 987 aa14.89□□□□□ -0.03
COPS7A-211ENST00000540408 MFSD5Q6N075 450 aa14.89□□□□□ -0.03
COPS7A-211ENST00000540408 MKL1Q969V6 931 aa14.89□□□□□ -0.03
COPS7A-211ENST00000540408 RAVER2Q9HCJ3 691 aaKnown RBP14.89□□□□□ -0.03
COPS7A-211ENST00000540408 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.89□□□□□ -0.03
COPS7A-211ENST00000540408 A0A0U1RQG5 324 aaPredicted RBP14.88□□□□□ -0.03
COPS7A-211ENST00000540408 RNF113AO15541 343 aaKnown RBP14.88□□□□□ -0.03
COPS7A-211ENST00000540408 SMARCA5O60264 1052 aaPredicted RBP14.88□□□□□ -0.03
COPS7A-211ENST00000540408 TTLL1O95922 423 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 ASGR1P07306 291 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 SLC3A2P08195 630 aaKnown RBP14.88□□□□□ -0.03
COPS7A-211ENST00000540408 DNAJB2P25686 324 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 CST5P28325 142 aaPredicted RBP14.88□□□□□ -0.03
COPS7A-211ENST00000540408 OAZ1P54368 228 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 PPIGQ13427 754 aaKnown RBP eCLIP14.88□□□□□ -0.03
COPS7A-211ENST00000540408 CCDC144BQ3MJ40 725 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 GNASQ5JWF2 1037 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 CCSAPQ6IQ19 270 aaPredicted RBP14.88□□□□□ -0.03
COPS7A-211ENST00000540408 TMEM199Q8N511 208 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 NACAP1Q9BZK3 213 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 SLC38A10Q9HBR0 1119 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 ISY1Q9ULR0 285 aaKnown RBP14.88□□□□□ -0.03
COPS7A-211ENST00000540408 CUL9Q8IWT3 2517 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 UNC80Q8N2C7 3258 aa14.88□□□□□ -0.03
COPS7A-211ENST00000540408 PATL2C9JE40 543 aaKnown RBP14.87□□□□□ -0.03
COPS7A-211ENST00000540408 GPAA1O43292 621 aa14.87□□□□□ -0.03
COPS7A-211ENST00000540408 TSPY3P0CV98 308 aa14.87□□□□□ -0.03
COPS7A-211ENST00000540408 TSPY8P0CW00 308 aa14.87□□□□□ -0.03
COPS7A-211ENST00000540408 BMP3P12645 472 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms