RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 PUS7LQ9H0K6 701 aaKnown RBP23.96■■□□□ 1.43
LPCAT3-210ENST00000540090 FAM184BQ9ULE4 1060 aa23.96■■□□□ 1.43
LPCAT3-210ENST00000540090 SYNGAP1Q96PV0 1343 aa23.95■■□□□ 1.42
LPCAT3-210ENST00000540090 MOXD2PA6NHM9 499 aa23.95■■□□□ 1.42
LPCAT3-210ENST00000540090 DCDC2CA8MYV0 355 aa23.95■■□□□ 1.42
LPCAT3-210ENST00000540090 ZSCAN25Q6NSZ9 544 aa23.95■■□□□ 1.42
LPCAT3-210ENST00000540090 SLF1Q9BQI6 1058 aa23.95■■□□□ 1.42
LPCAT3-210ENST00000540090 STARD7Q9NQZ5 370 aa23.95■■□□□ 1.42
LPCAT3-210ENST00000540090 DDX19BQ9UMR2 479 aa23.95■■□□□ 1.42
LPCAT3-210ENST00000540090 RIPK3Q9Y572 518 aa23.95■■□□□ 1.42
LPCAT3-210ENST00000540090 PARP14Q460N5 1801 aa23.95■■□□□ 1.42
LPCAT3-210ENST00000540090 SYNRGQ9UMZ2 1314 aa23.94■■□□□ 1.42
LPCAT3-210ENST00000540090 DNAJC25-GNG10A0A024R161 153 aa23.94■■□□□ 1.42
LPCAT3-210ENST00000540090 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.94■■□□□ 1.42
LPCAT3-210ENST00000540090 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.94■■□□□ 1.42
LPCAT3-210ENST00000540090 DDX11Q96FC9 970 aa23.94■■□□□ 1.42
LPCAT3-210ENST00000540090 NYAP2Q9P242 653 aa23.94■■□□□ 1.42
LPCAT3-210ENST00000540090 ARPP21Q9UBL0 812 aaPredicted RBP23.94■■□□□ 1.42
LPCAT3-210ENST00000540090 BAZ2AQ9UIF9 1905 aaKnown RBP23.94■■□□□ 1.42
LPCAT3-210ENST00000540090 F5H6K3 240 aa23.93■■□□□ 1.42
LPCAT3-210ENST00000540090 ATP2A1O14983 1001 aa23.93■■□□□ 1.42
LPCAT3-210ENST00000540090 DUSP11O75319 330 aaKnown RBP23.93■■□□□ 1.42
LPCAT3-210ENST00000540090 KLRC3Q07444 240 aa23.93■■□□□ 1.42
LPCAT3-210ENST00000540090 KCNA10Q16322 511 aa23.93■■□□□ 1.42
LPCAT3-210ENST00000540090 SBK1Q52WX2 424 aa23.93■■□□□ 1.42
LPCAT3-210ENST00000540090 SNRNP48Q6IEG0 339 aaKnown RBP23.93■■□□□ 1.42
LPCAT3-210ENST00000540090 ZNF467Q7Z7K2 595 aaPredicted RBP23.93■■□□□ 1.42
LPCAT3-210ENST00000540090 PRPF38AQ8NAV1 312 aaKnown RBP23.93■■□□□ 1.42
LPCAT3-210ENST00000540090 NUP88Q99567 741 aaPredicted RBP23.93■■□□□ 1.42
LPCAT3-210ENST00000540090 COL11A1P12107 1806 aaPredicted RBP23.92■■□□□ 1.42
LPCAT3-210ENST00000540090 TIMP1P01033 207 aa23.92■■□□□ 1.42
LPCAT3-210ENST00000540090 RASA1P20936 1047 aa23.92■■□□□ 1.42
LPCAT3-210ENST00000540090 GRIN2CQ14957 1233 aa23.92■■□□□ 1.42
LPCAT3-210ENST00000540090 STRBPQ96SI9 672 aaKnown RBP23.92■■□□□ 1.42
LPCAT3-210ENST00000540090 TBX21Q9UL17 535 aa23.92■■□□□ 1.42
LPCAT3-210ENST00000540090 COG6Q9Y2V7 657 aa23.92■■□□□ 1.42
LPCAT3-210ENST00000540090 MYH8P13535 1937 aa23.92■■□□□ 1.42
LPCAT3-210ENST00000540090 NDUFB10O96000 172 aa23.91■■□□□ 1.42
LPCAT3-210ENST00000540090 GIMAP6Q6P9H5 292 aa23.91■■□□□ 1.42
LPCAT3-210ENST00000540090 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.91■■□□□ 1.42
LPCAT3-210ENST00000540090 MKNK2Q9HBH9 465 aa23.91■■□□□ 1.42
LPCAT3-210ENST00000540090 ELP1O95163 1332 aa23.9■■□□□ 1.42
LPCAT3-210ENST00000540090 DNAJB2P25686 324 aa23.9■■□□□ 1.42
LPCAT3-210ENST00000540090 CST5P28325 142 aaPredicted RBP23.9■■□□□ 1.42
LPCAT3-210ENST00000540090 CDK7P50613 346 aa23.9■■□□□ 1.42
LPCAT3-210ENST00000540090 ACVR2BQ13705 512 aa23.9■■□□□ 1.42
LPCAT3-210ENST00000540090 SYMPKQ92797 1274 aaKnown RBP23.9■■□□□ 1.42
LPCAT3-210ENST00000540090 GLT1D1Q96MS3 346 aa23.9■■□□□ 1.42
LPCAT3-210ENST00000540090 ZHX1Q9UKY1 873 aaPredicted RBP23.9■■□□□ 1.42
LPCAT3-210ENST00000540090 MYADML2A6NDP7 307 aa23.89■■□□□ 1.41
LPCAT3-210ENST00000540090 GSG1L2A8MUP6 293 aa23.89■■□□□ 1.41
LPCAT3-210ENST00000540090 ZBED4O75132 1171 aa23.89■■□□□ 1.41
LPCAT3-210ENST00000540090 MFSD5Q6N075 450 aa23.89■■□□□ 1.41
LPCAT3-210ENST00000540090 CPXCR1Q8N123 301 aa23.89■■□□□ 1.41
LPCAT3-210ENST00000540090 MROH7Q68CQ1 1323 aa23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 PLXNA1Q9UIW2 1896 aa23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 IGKV6D-41A0A0C4DH26 115 aa23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 C16orf59Q7L2K0 433 aa23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 PCSK9Q8NBP7 692 aaKnown RBP23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 MKL1Q969V6 931 aa23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.88■■□□□ 1.417e-6■□□□□ 9.4
LPCAT3-210ENST00000540090 ABHD16BQ9H3Z7 469 aa23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 CHMP4BQ9H444 224 aaKnown RBP23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 ZNF576Q9H609 170 aa23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 CLIP2Q9UDT6 1046 aa23.88■■□□□ 1.41
LPCAT3-210ENST00000540090 MINDY4BA8MYZ0 360 aa23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 C6orf222P0C671 652 aaPredicted RBP23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 GJA9P57773 515 aa23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 IRX5P78411 483 aaPredicted RBP23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 STK11IPQ8N1F8 1099 aa23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 TIFAQ96CG3 184 aa23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 FGD4Q96M96 766 aa23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 LRRCC1Q9C099 1032 aa23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 UPF3AQ9H1J1 476 aaKnown RBP23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 SPC25Q9HBM1 224 aa23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 SLC38A10Q9HBR0 1119 aa23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 RAVER2Q9HCJ3 691 aaKnown RBP23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 PRDM6Q9NQX0 595 aa23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 TTC28Q96AY4 2481 aa23.87■■□□□ 1.41
LPCAT3-210ENST00000540090 ADCY6O43306 1168 aa23.86■■□□□ 1.41
LPCAT3-210ENST00000540090 ASGR1P07306 291 aa23.86■■□□□ 1.41
LPCAT3-210ENST00000540090 SLC4A3P48751 1232 aa23.86■■□□□ 1.41
LPCAT3-210ENST00000540090 PPIGQ13427 754 aaKnown RBP eCLIP23.86■■□□□ 1.41
LPCAT3-210ENST00000540090 CCDC144BQ3MJ40 725 aa23.86■■□□□ 1.41
LPCAT3-210ENST00000540090 TMEM240Q5SV17 173 aa23.86■■□□□ 1.41
LPCAT3-210ENST00000540090 ANKRD35Q8N283 1001 aa23.86■■□□□ 1.41
LPCAT3-210ENST00000540090 FBXO40Q9UH90 709 aa23.86■■□□□ 1.41
LPCAT3-210ENST00000540090 FEM1BQ9UK73 627 aa23.86■■□□□ 1.41
LPCAT3-210ENST00000540090 CTDP1Q9Y5B0 961 aaPredicted RBP23.86■■□□□ 1.41
LPCAT3-210ENST00000540090 MUC3AQ02505 3323 aa23.85■■□□□ 1.41
LPCAT3-210ENST00000540090 ARVCFO00192 962 aa23.85■■□□□ 1.41
LPCAT3-210ENST00000540090 RASIP1Q5U651 963 aa23.85■■□□□ 1.41
LPCAT3-210ENST00000540090 CCDC174Q6PII3 467 aa23.85■■□□□ 1.41
LPCAT3-210ENST00000540090 USP38Q8NB14 1042 aa23.85■■□□□ 1.41
LPCAT3-210ENST00000540090 CHST13Q8NET6 341 aa23.85■■□□□ 1.41
LPCAT3-210ENST00000540090 OSBP2Q969R2 916 aa23.85■■□□□ 1.41
LPCAT3-210ENST00000540090 KIFC2Q96AC6 838 aa23.85■■□□□ 1.41
LPCAT3-210ENST00000540090 VTI1AQ96AJ9 217 aa23.85■■□□□ 1.41
LPCAT3-210ENST00000540090 SYNPO2Q9UMS6 1093 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms