RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 LGR6Q9HBX8 967 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 GPRC5DQ9NZD1 345 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 CAMTA2O94983 1202 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 MED26O95402 600 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 TGFB1P01137 390 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 IGLV1-40P01703 118 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 PCSK2P16519 638 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 PREPP48147 710 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 DLK2Q6UY11 383 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.36□□□□□ -1.55
C2CD3-214ENST00000540057 CDC37L1Q7L3B6 337 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 VN1R5Q7Z5H4 357 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 ZDHHC13Q8IUH4 622 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 AEBP1Q8IUX7 1158 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 UTP4Q969X6 686 aaKnown RBP5.36□□□□□ -1.55
C2CD3-214ENST00000540057 NXPE3Q969Y0 559 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 C7orf69Q9H7B7 122 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 OSGEPQ9NPF4 335 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 FOXD3Q9UJU5 478 aaPredicted RBP5.36□□□□□ -1.55
C2CD3-214ENST00000540057 GTF3C3Q9Y5Q9 886 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 MRC1P22897 1456 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 UBR2Q8IWV8 1755 aa5.36□□□□□ -1.55
C2CD3-214ENST00000540057 POLR2AP24928 1970 aaKnown RBP5.36□□□□□ -1.55
C2CD3-214ENST00000540057 KIAA1324LA8MWY0 1029 aaPredicted RBP5.35□□□□□ -1.55
C2CD3-214ENST00000540057 GSC2O15499 205 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 STARD3NLO95772 234 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 ALDH1B1P30837 517 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 SSTR4P31391 388 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 IL6STP40189 918 aaPredicted RBP5.35□□□□□ -1.55
C2CD3-214ENST00000540057 ZNF157P51786 506 aaPredicted RBP5.35□□□□□ -1.55
C2CD3-214ENST00000540057 NLRP12P59046 1061 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 PEAR1Q5VY43 1037 aaPredicted RBP5.35□□□□□ -1.55
C2CD3-214ENST00000540057 ALKBH2Q6NS38 261 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 FBXO46Q6PJ61 603 aaPredicted RBP5.35□□□□□ -1.55
C2CD3-214ENST00000540057 USP48Q86UV5 1035 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 NBPF5PQ86XG9 351 aaPredicted RBP5.35□□□□□ -1.55
C2CD3-214ENST00000540057 TRIM42Q8IWZ5 723 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 GJD3Q8N144 294 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 SNX29Q8TEQ0 813 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 ZNF296Q8WUU4 475 aaPredicted RBP5.35□□□□□ -1.55
C2CD3-214ENST00000540057 OSMRQ99650 979 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 KRTAP4-12Q9BQ66 201 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 BHLHE41Q9C0J9 482 aaPredicted RBP5.35□□□□□ -1.55
C2CD3-214ENST00000540057 LATS2Q9NRM7 1088 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 STOML1Q9UBI4 398 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 HDAC9Q9UKV0 1011 aa5.35□□□□□ -1.55
C2CD3-214ENST00000540057 PAPPA2Q9BXP8 1791 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 SZT2Q5T011 3432 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 NPC1L1Q9UHC9 1359 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 HMX2A2RU54 273 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 RNMTO43148 476 aaKnown RBP5.34□□□□□ -1.55
C2CD3-214ENST00000540057 PHACTR2O75167 634 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 GMPSP49915 693 aaPredicted RBP5.34□□□□□ -1.55
C2CD3-214ENST00000540057 CXCL9Q07325 125 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 NFIAQ12857 509 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 ZNF211Q13398 564 aaPredicted RBP5.34□□□□□ -1.55
C2CD3-214ENST00000540057 ANKRD34AQ69YU3 496 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 FAM20CQ8IXL6 584 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 NIM1KQ8IY84 436 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 C2orf69Q8N8R5 385 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 SLC7A3Q8WY07 619 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 PMEPA1Q969W9 287 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 GBA2Q9HCG7 927 aaPredicted RBP5.34□□□□□ -1.55
C2CD3-214ENST00000540057 PCMTD2Q9NV79 361 aa5.34□□□□□ -1.55
C2CD3-214ENST00000540057 RBBP6Q7Z6E9 1792 aaKnown RBP5.34□□□□□ -1.56
C2CD3-214ENST00000540057 PITPNM2Q9BZ72 1349 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 SHTN1A0MZ66 631 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 FAM177BA6PVY3 158 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 SOX1O00570 391 aaPredicted RBP5.33□□□□□ -1.56
C2CD3-214ENST00000540057 FAM13AO94988 1023 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 TBC1D8O95759 1140 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 A1BGP04217 495 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 EDN3P14138 238 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 TNNT2P45379 298 aaPredicted RBP5.33□□□□□ -1.56
C2CD3-214ENST00000540057 C19orf57Q0VDD7 668 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 AOC3Q16853 763 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 RNF43Q68DV7 783 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 SULT6B1Q6IMI4 303 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 TPTE2Q6XPS3 522 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 BSNDQ8WZ55 320 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 RUSC1Q9BVN2 902 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 RNF208Q9H0X6 261 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 COL6A3P12111 3177 aa5.33□□□□□ -1.56
C2CD3-214ENST00000540057 HEG1Q9ULI3 1381 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 CDHR2Q9BYE9 1310 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 MEGF11A6BM72 1044 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 PRR19A6NJB7 356 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 PPIP5K2O43314 1243 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 DLGAP3O95886 979 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 BMP3P12645 472 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 EN2P19622 333 aaPredicted RBP5.32□□□□□ -1.56
C2CD3-214ENST00000540057 SPINK2P20155 84 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 USP5P45974 858 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 EHHADHQ08426 723 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 CRY2Q49AN0 593 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 CLEC4GQ6UXB4 293 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 RASAL3Q86YV0 1011 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 TTC16Q8NEE8 873 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 ZNF496Q96IT1 587 aaPredicted RBP5.32□□□□□ -1.56
C2CD3-214ENST00000540057 DBNDD2Q9BQY9 259 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms