RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 SLITRK5O94991 958 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 RAG1P15918 1043 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 CCNFP41002 786 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 CLCQ05315 142 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 ARSHQ5FYA8 562 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 PHACTR4Q8IZ21 702 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 TMEM40Q8WWA1 233 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 RELTQ969Z4 430 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 CCDC74BQ96LY2 380 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 CRBNQ96SW2 442 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 DPH2Q9BQC3 489 aaPredicted RBP7.84□□□□□ -1.15
MRE11-209ENST00000540013 MAF1Q9H063 256 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 EFR3BQ9Y2G0 817 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 LAS1LQ9Y4W2 734 aaKnown RBP7.84□□□□□ -1.15
MRE11-209ENST00000540013 RAPGEF6Q8TEU7 1601 aa7.84□□□□□ -1.15
MRE11-209ENST00000540013 CFAP43Q8NDM7 1665 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 TEX14Q8IWB6 1497 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 SLC22A31A6NKX4 558 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 LEFTY1O75610 366 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 SFRP5Q5T4F7 317 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 CDCP2Q5VXM1 449 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 CCSAPQ6IQ19 270 aaPredicted RBP7.83□□□□□ -1.16
MRE11-209ENST00000540013 C22orf34Q6ZV56 151 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 LRP10Q7Z4F1 713 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 NME8Q8N427 588 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 OR6P1Q8NGX9 317 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 XAGE3Q8WTP9 111 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 LRRC4CQ9HCJ2 640 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 GINM1Q9NU53 330 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 CEP131Q9UPN4 1083 aa7.83□□□□□ -1.16
MRE11-209ENST00000540013 EOMESO95936 686 aa7.82□□□□□ -1.16
MRE11-209ENST00000540013 PAX3P23760 479 aa7.82□□□□□ -1.16
MRE11-209ENST00000540013 KIR3DL1P43629 444 aa7.82□□□□□ -1.16
MRE11-209ENST00000540013 FAM50AQ14320 339 aaKnown RBP7.82□□□□□ -1.16
MRE11-209ENST00000540013 FHOD3Q2V2M9 1422 aa7.82□□□□□ -1.16
MRE11-209ENST00000540013 OVOS1Q6IE37 1185 aa7.82□□□□□ -1.16
MRE11-209ENST00000540013 NLRC3Q7RTR2 1065 aa7.82□□□□□ -1.16
MRE11-209ENST00000540013 RBBP8NLQ8NC74 664 aaPredicted RBP7.82□□□□□ -1.16
MRE11-209ENST00000540013 KRTAP4-7Q9BYR0 210 aa7.82□□□□□ -1.16
MRE11-209ENST00000540013 GOLGA2P5Q9HBQ8 144 aa7.82□□□□□ -1.16
MRE11-209ENST00000540013 EFCAB5A4FU69 1503 aa7.82□□□□□ -1.16
MRE11-209ENST00000540013 ATP10BO94823 1461 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 UPK3BL1B0FP48 263 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 CHURC1-FNTBB4DL54 471 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 UPK3BL2E5RIL1 263 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 RGS13O14921 159 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 GBP1P32455 592 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 CD97P48960 835 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 LRP8Q14114 963 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 ZFYVE27Q5T4F4 411 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 FBXW10Q5XX13 1052 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 SHISA5Q8N114 240 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 NETO1Q8TDF5 533 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 PNISRQ8TF01 805 aaKnown RBP7.81□□□□□ -1.16
MRE11-209ENST00000540013 CPLX3Q8WVH0 158 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 MISP3Q96FF7 219 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 CEP89Q96ST8 783 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 TM9SF2Q99805 663 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 IER2Q9BTL4 223 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.81□□□□□ -1.16
MRE11-209ENST00000540013 CNNM2Q9H8M5 875 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 ZNF408Q9H9D4 720 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 FANCLQ9NW38 375 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 SNTG2Q9NY99 539 aa7.81□□□□□ -1.16
MRE11-209ENST00000540013 CD109Q6YHK3 1445 aa7.8□□□□□ -1.16
MRE11-209ENST00000540013 SSBP05455 408 aaKnown RBP eCLIP7.8□□□□□ -1.16
MRE11-209ENST00000540013 CEACAM5P06731 702 aa7.8□□□□□ -1.16
MRE11-209ENST00000540013 NASPP49321 788 aaPredicted RBP7.8□□□□□ -1.16
MRE11-209ENST00000540013 EIF6P56537 245 aaKnown RBP7.8□□□□□ -1.16
MRE11-209ENST00000540013 RASA3Q14644 834 aa7.8□□□□□ -1.16
MRE11-209ENST00000540013 IFI16Q16666 785 aaKnown RBP7.8□□□□□ -1.16
MRE11-209ENST00000540013 INTS3Q68E01 1043 aaKnown RBP7.8□□□□□ -1.16
MRE11-209ENST00000540013 KIAA0907Q7Z7F0 614 aaPredicted RBP7.8□□□□□ -1.16
MRE11-209ENST00000540013 FERMT3Q86UX7 667 aa7.8□□□□□ -1.16
MRE11-209ENST00000540013 TAB3Q8N5C8 712 aaPredicted RBP7.8□□□□□ -1.16
MRE11-209ENST00000540013 APPBP2Q92624 585 aa7.8□□□□□ -1.16
MRE11-209ENST00000540013 ATG4CQ96DT6 458 aa7.8□□□□□ -1.16
MRE11-209ENST00000540013 DEPDC7Q96QD5 511 aa7.8□□□□□ -1.16
MRE11-209ENST00000540013 PLCD4Q9BRC7 762 aa7.8□□□□□ -1.16
MRE11-209ENST00000540013 SRRTQ9BXP5 876 aaKnown RBP7.8□□□□□ -1.16
MRE11-209ENST00000540013 BSDC1Q9NW68 430 aaPredicted RBP7.8□□□□□ -1.16
MRE11-209ENST00000540013 PPT2Q9UMR5 302 aa7.8□□□□□ -1.16
MRE11-209ENST00000540013 MAGI3Q5TCQ9 1506 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 TMEM265A0A087WTH1 108 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 SCO2A0A1W2PP80 73 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 KIAA1324LA8MWY0 1029 aaPredicted RBP7.79□□□□□ -1.16
MRE11-209ENST00000540013 VIL1P09327 827 aaKnown RBP7.79□□□□□ -1.16
MRE11-209ENST00000540013 ZNF865P0CJ78 1059 aaPredicted RBP7.79□□□□□ -1.16
MRE11-209ENST00000540013 NME1P15531 152 aaKnown RBP7.79□□□□□ -1.16
MRE11-209ENST00000540013 RNF4P78317 190 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 UBE4AQ14139 1066 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 FAM214BQ7L5A3 538 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 CDH24Q86UP0 819 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 STK11IPQ8N1F8 1099 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 TMTC2Q8N394 836 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 MFSD4AQ8N468 514 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 DNAJB8Q8NHS0 232 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 RNF141Q8WVD5 230 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 HEXIM2Q96MH2 286 aaKnown RBP7.79□□□□□ -1.16
MRE11-209ENST00000540013 ASPNQ9BXN1 380 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms