RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 VPS54Q9P1Q0 977 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 ATP6V0A2Q9Y487 856 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 ZNF831Q5JPB2 1677 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 MACROD2A1Z1Q3 448 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 ZEB2O60315 1214 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 ERCC3P19447 782 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 KIF5AQ12840 1032 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 SEPT7Q16181 437 aaKnown RBP11.23□□□□□ -0.61
TRAF1-202ENST00000540010 KRBA2Q6ZNG9 492 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 HEATR3Q7Z4Q2 680 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 ATRIPQ8WXE1 791 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
TRAF1-202ENST00000540010 EXOC1Q9NV70 894 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 MRVI1Q9Y6F6 885 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 STK36Q9NRP7 1315 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 LAMB2P55268 1798 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 NTRK3Q16288 839 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 NOSTRINQ8IVI9 506 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 LRRC8AQ8IWT6 810 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 KIAA1524Q8TCG1 905 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 MASTLQ96GX5 879 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 GDAP1L1Q96MZ0 367 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 PPP1R1BQ9UD71 204 aaPredicted RBP11.22□□□□□ -0.61
TRAF1-202ENST00000540010 TTF2Q9UNY4 1162 aaKnown RBP11.22□□□□□ -0.61
TRAF1-202ENST00000540010 LUC7L2Q9Y383 392 aaKnown RBP11.22□□□□□ -0.61
TRAF1-202ENST00000540010 LAMA4Q16363 1823 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 FGFR1OPO95684 399 aaKnown RBP11.22□□□□□ -0.61
TRAF1-202ENST00000540010 AMPD3Q01432 767 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 EVX2Q03828 476 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
TRAF1-202ENST00000540010 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAF1-202ENST00000540010 KRT86O43790 486 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 ORC4O43929 436 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 DDAH1O94760 285 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 PLEKHA8P1O95397 391 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 SBK1Q52WX2 424 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 VPS36Q86VN1 386 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 DESI2Q9BSY9 194 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 COA1Q9GZY4 146 aa11.22□□□□□ -0.61
TRAF1-202ENST00000540010 SCNN1DP51172 638 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 PNOCQ13519 176 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 CCDC122Q5T0U0 273 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 C12orf60Q5U649 245 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 MICALL1Q8N3F8 863 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 SLC44A5Q8NCS7 719 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 SPAG5Q96R06 1193 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 NAA15Q9BXJ9 866 aaKnown RBP11.21□□□□□ -0.61
TRAF1-202ENST00000540010 RNF26Q9BY78 433 aaPredicted RBP11.21□□□□□ -0.61
TRAF1-202ENST00000540010 RMND1Q9NWS8 449 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 ARAP2Q8WZ64 1704 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 VGLL3A8MV65 326 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 MMP1P03956 469 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 SRGNP10124 158 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 SEC23AQ15436 765 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 GIMAP7Q8NHV1 300 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 GOLPH3LQ9H4A5 285 aa11.21□□□□□ -0.61
TRAF1-202ENST00000540010 PPP1R12BO60237 982 aaPredicted RBP11.21□□□□□ -0.62
TRAF1-202ENST00000540010 KRT2P35908 639 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 RCAN1P53805 252 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 TMEM132AQ24JP5 1023 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 PNMA1Q8ND90 353 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 PDLIM2Q96JY6 352 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 NDUFA8P51970 172 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 NLRP12P59046 1061 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 CHMP4BP1P59074 171 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 MAP2K1Q02750 393 aaPredicted RBP11.21□□□□□ -0.62
TRAF1-202ENST00000540010 IQUBQ8NA54 791 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 EHBP1Q8NDI1 1231 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 DBNDD1Q9H9R9 158 aa11.21□□□□□ -0.62
TRAF1-202ENST00000540010 IL1R1P14778 569 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 EN1Q05925 392 aaPredicted RBP11.2□□□□□ -0.62
TRAF1-202ENST00000540010 NR5A1Q13285 461 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 SLC39A14Q15043 492 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 C15orf52Q6ZUT6 534 aaKnown RBP11.2□□□□□ -0.62
TRAF1-202ENST00000540010 GSTTP1A0A1W2PQM5 241 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 USP17L3A6NCW0 530 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 USP17L4A6NCW7 530 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 ARHGAP6O43182 974 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 RILPL1Q5EBL4 403 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 USP17L1Q7RTZ2 530 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 IFT81Q8WYA0 676 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 HSF2BPO75031 334 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 TACC1O75410 805 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 BMP15O95972 392 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 CKAP4Q07065 602 aaKnown RBP11.2□□□□□ -0.62
TRAF1-202ENST00000540010 CNGA4Q8IV77 575 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 FAM114A1Q8IWE2 563 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 PSMB7Q99436 277 aa11.2□□□□□ -0.62
TRAF1-202ENST00000540010 A0A1W2PQ27 194 aa11.19□□□□□ -0.62
TRAF1-202ENST00000540010 A0A1W2PQ64 194 aa11.19□□□□□ -0.62
TRAF1-202ENST00000540010 A0A1W2PQD8 194 aa11.19□□□□□ -0.62
TRAF1-202ENST00000540010 IVLP07476 585 aa11.19□□□□□ -0.62
TRAF1-202ENST00000540010 PFKFB1P16118 471 aa11.19□□□□□ -0.62
TRAF1-202ENST00000540010 PPP4CP60510 307 aa11.19□□□□□ -0.62
TRAF1-202ENST00000540010 GABPB1Q06547 395 aaPredicted RBP11.19□□□□□ -0.62
TRAF1-202ENST00000540010 CTNNBL1Q8WYA6 563 aaPredicted RBP11.19□□□□□ -0.62
TRAF1-202ENST00000540010 KRT9P35527 623 aa11.19□□□□□ -0.62
TRAF1-202ENST00000540010 GNAQP50148 359 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms