RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 PITPNM2Q9BZ72 1349 aa11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 TOB1P50616 345 aaPredicted RBP11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 MOB2Q70IA6 237 aa11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 KLRG1Q96E93 195 aa11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 VCPKMTQ9H867 229 aa11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 GOPCQ9HD26 462 aa11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 FBXO28Q9NVF7 368 aa11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 ZNF112Q9UJU3 913 aa11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 GREB1LQ9C091 1923 aaPredicted RBP11.9□□□□□ -0.5
PABPC1P4-201ENST00000539977 MYH8P13535 1937 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 TRIM75PA6NK02 468 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP2O75604 605 aaPredicted RBP11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 SMARCA1P28370 1054 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 FMR1Q06787 632 aaKnown RBP eCLIP11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 SPP2Q13103 211 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 MTMR2Q13614 643 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 SF3A1Q15459 793 aaKnown RBP11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 PIK3AP1Q6ZUJ8 805 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 SCYL3Q8IZE3 742 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 ZNF526Q8TF50 670 aaPredicted RBP11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 PGBD1Q96JS3 809 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 PICK1Q9NRD5 415 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 PPP2R3BQ9Y5P8 575 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 ZHX2Q9Y6X8 837 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 PNMA6FA0A0J9YX94 578 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 SMCO2A6NFE2 343 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 WNT7AO00755 349 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 PTPRAP18433 802 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 PTMSP20962 102 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 MARCKSP29966 332 aaPredicted RBP11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 STK38Q15208 465 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 CDC37Q16543 378 aaPredicted RBP11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 QRICH1Q2TAL8 776 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 KLHL40Q2TBA0 621 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 SKOR2Q2VWA4 1001 aaPredicted RBP11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 SYDE2Q5VT97 1194 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 ANO1Q5XXA6 986 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 BLIDQ8IZY5 108 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 RGS22Q8NE09 1264 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 TNFRSF25Q93038 417 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 KIFC2Q96AC6 838 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 HOOK2Q96ED9 719 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 BRMS1Q9HCU9 246 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 SH3GLB2Q9NR46 395 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 RTEL1Q9NZ71 1219 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 RCOR1Q9UKL0 485 aa11.89□□□□□ -0.51
PABPC1P4-201ENST00000539977 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 IQCA1LA6NCM1 817 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 GOLGA6L4A6NEF3 574 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 ZBTB5O15062 677 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 ME1P48163 572 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 UBE2HP62256 183 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 MAP1SQ66K74 1059 aaPredicted RBP11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 LINC00301Q8NCQ3 95 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 CNKSR2Q8WXI2 1034 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 CDCA5Q96FF9 252 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 SH2D4AQ9H788 454 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 RRAGCQ9HB90 399 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 PRR12Q9ULL5 1215 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 PCDHA4Q9UN74 947 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 PCDHB6Q9Y5E3 794 aa11.88□□□□□ -0.51
PABPC1P4-201ENST00000539977 TRAF5O00463 557 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 CALML3P27482 149 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 STAT2P52630 851 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 VGLL4Q14135 290 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 TTLL12Q14166 644 aaPredicted RBP11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 USH1GQ495M9 461 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 MTMR8Q96EF0 704 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 BIN2Q9UBW5 565 aaPredicted RBP11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 ELP1O95163 1332 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 SPTLC2O15270 562 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 LIG1P18858 919 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 NASPP49321 788 aaPredicted RBP11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 ATL3Q6DD88 541 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 CCDC148Q8NFR7 591 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 ZC3H15Q8WU90 426 aaKnown RBP11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 CLMNQ96JQ2 1002 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 ZMYND12Q9H0C1 365 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 EMILIN3Q9NT22 766 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 POLR3EQ9NVU0 708 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 TMEM260Q9NX78 707 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 SYNPO2Q9UMS6 1093 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 PCDHA7Q9UN72 937 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 PCDHA6Q9UN73 950 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 PCDHA8Q9Y5H6 950 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 PCDHA1Q9Y5I3 950 aa11.87□□□□□ -0.51
PABPC1P4-201ENST00000539977 PPP1R12BO60237 982 aaPredicted RBP11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 HMGCS2P54868 508 aa11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 ZNF174Q15697 407 aa11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 UBE2SQ16763 222 aa11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 JAKMIP3Q5VZ66 844 aa11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 CCDC174Q6PII3 467 aa11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 ZNF280CQ8ND82 737 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms