RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.18□□□□□ -0.62
MDH1-215ENST00000539945 TDRD3Q9H7E2 651 aaKnown RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 PI4KBQ9UBF8 816 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 RCOR1Q9UKL0 485 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 ISY1Q9ULR0 285 aaKnown RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 STX8Q9UNK0 236 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 IGKV6D-41A0A0C4DH26 115 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 UBE2Q2LH0YL09 131 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 MMP1P03956 469 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 TOP1P11387 765 aaKnown RBP11.17□□□□□ -0.62
MDH1-215ENST00000539945 CACNB3P54284 484 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 ZNF445P59923 1031 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 TNIP1Q15025 636 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 PKN1Q16512 942 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 METTL16Q86W50 562 aaKnown RBP11.17□□□□□ -0.62
MDH1-215ENST00000539945 SRBD1Q8N5C6 995 aaKnown RBP11.17□□□□□ -0.62
MDH1-215ENST00000539945 TTC13Q8NBP0 860 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 CEP95Q96GE4 821 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 LZTS2Q9BRK4 669 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 MTMR4Q9NYA4 1195 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 RTEL1Q9NZ71 1219 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 BCS1LQ9Y276 419 aa11.17□□□□□ -0.62
MDH1-215ENST00000539945 CNTNAP5Q8WYK1 1306 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 FSD2A1L4K1 749 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 DDTLA6NHG4 134 aaPredicted RBP11.16□□□□□ -0.62
MDH1-215ENST00000539945 KIF28PB7ZC32 967 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 AKR1B1P15121 316 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 XBP1P17861 261 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 OSBPP22059 807 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 TCP10Q12799 353 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 DLGAP5Q15398 846 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 SAFBQ15424 915 aaKnown RBP eCLIP11.16□□□□□ -0.62
MDH1-215ENST00000539945 ZSCAN23Q3MJ62 389 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 FKBP1CQ5VVH2 108 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 MYSM1Q5VVJ2 828 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 CIAPIN1Q6FI81 312 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 PADI6Q6TGC4 694 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 SH3BP5LQ7L8J4 393 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 USP28Q96RU2 1077 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 TMEM63CQ9P1W3 806 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 MAD2L2Q9UI95 211 aa11.16□□□□□ -0.62
MDH1-215ENST00000539945 MYH6P13533 1939 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 MYH8P13535 1937 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 SIPA1L1O43166 1804 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 ARFGEF1Q9Y6D6 1849 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 PALM3A6NDB9 673 aaPredicted RBP11.15□□□□□ -0.62
MDH1-215ENST00000539945 FAM187AA6NFU0 413 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 SOCS7O14512 581 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 SMARCA1P28370 1054 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 GNL2Q13823 731 aaKnown RBP11.15□□□□□ -0.62
MDH1-215ENST00000539945 TATDN1Q6P1N9 297 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 ZBED3Q96IU2 234 aaPredicted RBP11.15□□□□□ -0.62
MDH1-215ENST00000539945 FOXP1Q9H334 677 aaPredicted RBP11.15□□□□□ -0.62
MDH1-215ENST00000539945 DNAJC18Q9H819 358 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 POLR3EQ9NVU0 708 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 TMOD2Q9NZR1 351 aa11.15□□□□□ -0.62
MDH1-215ENST00000539945 ZNF70Q9UC06 446 aaPredicted RBP11.15□□□□□ -0.62
MDH1-215ENST00000539945 GREB1LQ9C091 1923 aaPredicted RBP11.15□□□□□ -0.62
MDH1-215ENST00000539945 GOLGA6L4A6NEF3 574 aa11.14□□□□□ -0.63
MDH1-215ENST00000539945 GOLGA6L3A6NEY3 463 aa11.14□□□□□ -0.63
MDH1-215ENST00000539945 YEATS4O95619 227 aa11.14□□□□□ -0.63
MDH1-215ENST00000539945 TTLL1O95922 423 aa11.14□□□□□ -0.63
MDH1-215ENST00000539945 RPS12P25398 132 aaKnown RBP11.14□□□□□ -0.63
MDH1-215ENST00000539945 NASPP49321 788 aaPredicted RBP11.14□□□□□ -0.63
MDH1-215ENST00000539945 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
MDH1-215ENST00000539945 ZNF697Q5TEC3 545 aa11.14□□□□□ -0.63
MDH1-215ENST00000539945 NOSTRINQ8IVI9 506 aa11.14□□□□□ -0.63
MDH1-215ENST00000539945 ZSCAN29Q8IWY8 852 aaPredicted RBP11.14□□□□□ -0.63
MDH1-215ENST00000539945 PGBD1Q96JS3 809 aa11.14□□□□□ -0.63
MDH1-215ENST00000539945 SPON1Q9HCB6 807 aa11.14□□□□□ -0.63
MDH1-215ENST00000539945 KCNJ14Q9UNX9 436 aa11.14□□□□□ -0.63
MDH1-215ENST00000539945 BTBD18B2RXH4 712 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 PARP1P09874 1014 aaKnown RBP11.13□□□□□ -0.63
MDH1-215ENST00000539945 SCG2P13521 617 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 ZNF280AP59817 542 aaPredicted RBP11.13□□□□□ -0.63
MDH1-215ENST00000539945 CEBPZQ03701 1054 aaKnown RBP11.13□□□□□ -0.63
MDH1-215ENST00000539945 KMT5BQ4FZB7 885 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 CCDC183Q5T5S1 534 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 BLOC1S3Q6QNY0 202 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 DIS3L2Q8IYB7 885 aaKnown RBP11.13□□□□□ -0.63
MDH1-215ENST00000539945 FAM177A1Q8N128 213 aaPredicted RBP11.13□□□□□ -0.63
MDH1-215ENST00000539945 STAG2Q8N3U4 1231 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 LINC00301Q8NCQ3 95 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 NLGN2Q8NFZ4 835 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 KCNG4Q8TDN1 519 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 FAM151AQ8WW52 585 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 PHF20Q9BVI0 1012 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 SPZ1Q9BXG8 430 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 TRIM34Q9BYJ4 488 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 FTOQ9C0B1 505 aaKnown RBP eCLIP11.13□□□□□ -0.63
MDH1-215ENST00000539945 SH3GLB2Q9NR46 395 aa11.13□□□□□ -0.63
MDH1-215ENST00000539945 HERC5Q9UII4 1024 aaKnown RBP11.13□□□□□ -0.63
MDH1-215ENST00000539945 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
MDH1-215ENST00000539945 KLRF2D3W0D1 207 aa11.12□□□□□ -0.63
MDH1-215ENST00000539945 FZD9O00144 591 aa11.12□□□□□ -0.63
MDH1-215ENST00000539945 LETM1O95202 739 aaPredicted RBP11.12□□□□□ -0.63
MDH1-215ENST00000539945 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
MDH1-215ENST00000539945 CERKLQ49MI3 558 aaPredicted RBP11.12□□□□□ -0.63
MDH1-215ENST00000539945 ANO1Q5XXA6 986 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms