RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 TM6SF1Q9BZW5 370 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 ARHGAP39Q9C0H5 1083 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 CCDC69A6NI79 296 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 ANAPC15P60006 121 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 TMEM132BQ14DG7 1078 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 BTNL9Q6UXG8 535 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 CATIPQ7Z7H3 387 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 TMTC2Q8N394 836 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 REPS2Q8NFH8 660 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 MYL10Q9BUA6 226 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 UPF3BQ9BZI7 483 aaKnown RBP14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 CPVLQ9H3G5 476 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 PRR12Q9ULL5 1215 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 MYH6P13533 1939 aa14.86□□□□□ -0.03
TSPAN9-207ENST00000539631 PLXNB2O15031 1838 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 PARP1P09874 1014 aaKnown RBP14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 PSMC4P43686 418 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 SNAP25P60880 206 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 TROAPQ12815 778 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 KIF22Q14807 665 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 GRM4Q14833 912 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 ASPRV1Q53RT3 343 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 GPATCH4Q5T3I0 446 aaKnown RBP14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 SYDE2Q5VT97 1194 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 SGMS1Q86VZ5 419 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 RAB11FIP4Q86YS3 637 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 STAG2Q8N3U4 1231 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 MB21D1Q8N884 522 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 NUP133Q8WUM0 1156 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 UBA5Q9GZZ9 404 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 MAD2L2Q9UI95 211 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 CYP46A1Q9Y6A2 500 aa14.85□□□□□ -0.03
TSPAN9-207ENST00000539631 DOCK3Q8IZD9 2030 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 PALM3A6NDB9 673 aaPredicted RBP14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 ZBED4O75132 1171 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 DDAH1O94760 285 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 FGD1P98174 961 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 PLS1Q14651 629 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 IL17RAQ96F46 866 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 TRIM47Q96LD4 638 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 MOV10L1Q9BXT6 1211 aaKnown RBP14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 BACH2Q9BYV9 841 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 C22orf23Q9BZE7 217 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 SPATC1LQ9H0A9 340 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 PORCNQ9H237 461 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 EFCC1Q9HA90 598 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 SLC38A10Q9HBR0 1119 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 ZNF214Q9UL59 606 aaPredicted RBP14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 BRPF3Q9ULD4 1205 aa14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 CTDP1Q9Y5B0 961 aaPredicted RBP14.84□□□□□ -0.03
TSPAN9-207ENST00000539631 FMNL1O95466 1100 aaPredicted RBP14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 RXRAP19793 462 aa14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 FCGRTP55899 365 aa14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 MLLT1Q03111 559 aaPredicted RBP14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 APOBRQ0VD83 1088 aa14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 CPXCR1Q8N123 301 aa14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 BRF1Q92994 677 aa14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 AGXT2Q9BYV1 514 aa14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 RAVER2Q9HCJ3 691 aaKnown RBP14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 TRIM17Q9Y577 477 aa14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 SLC12A7Q9Y666 1083 aa14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 ZNFX1Q9P2E3 1918 aaKnown RBP14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 SMCHD1A6NHR9 2005 aa14.83□□□□□ -0.04
TSPAN9-207ENST00000539631 KLF18A0A0U1RQI7 1052 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 KLRF2D3W0D1 207 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 TNPO2O14787 897 aaKnown RBP14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 FDX1P10109 184 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 STAT3P40763 770 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 SLC4A3P48751 1232 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 CCNA1P78396 465 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 TOB2Q14106 344 aaPredicted RBP14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 CCDC174Q6PII3 467 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 APOA5Q6Q788 366 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 SYNE3Q6ZMZ3 975 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 OTOP1Q7RTM1 612 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 CTU1Q7Z7A3 348 aaKnown RBP14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 CCDC144CPQ8IYA2 1237 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 FBXL16Q8N461 479 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 MAP3K14Q99558 947 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 RANBP17Q9H2T7 1088 aaKnown RBP14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 PDRG1Q9NUG6 133 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 ZNF536O15090 1300 aa14.82□□□□□ -0.04
TSPAN9-207ENST00000539631 ATP2A1O14983 1001 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 CALM1P0DP23 149 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 CALM2P0DP24 149 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 CALM3P0DP25 149 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 ERCC3P19447 782 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 MAPK4P31152 587 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 RBM25P49756 843 aaKnown RBP14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 ARHGEF6Q15052 776 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 SLC35G1Q2M3R5 365 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 WDR78Q5VTH9 848 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 SNRNP48Q6IEG0 339 aaKnown RBP14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 GPR142Q7Z601 462 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 NBPF11Q86T75 865 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 MICU3Q86XE3 530 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 NCAPG2Q86XI2 1143 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 RIOX2Q8IUF8 465 aa14.81□□□□□ -0.04
TSPAN9-207ENST00000539631 CCAR1Q8IX12 1150 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms