RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ECEL1O95672 775 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 SYN1P17600 705 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 LIG1P18858 919 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 PWP1Q13610 501 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 UBE4AQ14139 1066 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 ZNF394Q53GI3 561 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 KRBA2Q6ZNG9 492 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 KCNN1Q92952 543 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 FANCD2OSQ96PS1 177 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 FOXD3Q9UJU5 478 aaPredicted RBP4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 TTF2Q9UNY4 1162 aaKnown RBP4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 PCDHGB7Q9Y5F8 929 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 UHRF1BP1LA0JNW5 1464 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 KDM5CP41229 1560 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 NEURL4Q96JN8 1562 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 GADD45BO75293 160 aaPredicted RBP4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 B3GALT4O96024 378 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 HCLS1P14317 486 aaPredicted RBP4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 ATF4P18848 351 aaPredicted RBP4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 PTPN12Q05209 780 aaKnown RBP4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 ORC1Q13415 861 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 TTLL4Q14679 1199 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 PEAR1Q5VY43 1037 aaPredicted RBP4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 CCNJLQ8IV13 435 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 GPRASP2Q96D09 838 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 SLC26A8Q96RN1 970 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 SETDB2Q96T68 719 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 MTA3Q9BTC8 594 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 TRIM55Q9BYV6 548 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 TNKS2Q9H2K2 1166 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 PARD6AQ9NPB6 346 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 CD320Q9NPF0 282 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 RPS6KL1Q9Y6S9 549 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 WDR7Q9Y4E6 1490 aa4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 SUPT6HQ7KZ85 1726 aaKnown RBP4.91□□□□□ -1.62
AC055720.1-201ENST00000539552 POLR1AO95602 1720 aaPredicted RBP4.9□□□□□ -1.62
AC055720.1-201ENST00000539552 FOXD2O60548 495 aaPredicted RBP4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 CDC45O75419 566 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 WDHD1O75717 1129 aaPredicted RBP4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 IGHA2P01877 340 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 BMP7P18075 431 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 GLDCP23378 1020 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 ST13P50502 369 aaKnown RBP4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 CLCN7P51798 805 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 EVA1CP58658 441 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 SPRED3Q2MJR0 410 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 ARSHQ5FYA8 562 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 RELL1Q8IUW5 271 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 CPLX3Q8WVH0 158 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 CEP89Q96ST8 783 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 TRIM56Q9BRZ2 755 aaKnown RBP4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 IER2Q9BTL4 223 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 ZC3H12CQ9C0D7 883 aaKnown RBP4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 SIRPGQ9P1W8 387 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 TCEAL9Q9UHQ7 104 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 SMG5Q9UPR3 1016 aaKnown RBP4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 SYNMO15061 1565 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 NWD1Q149M9 1564 aa4.9□□□□□ -1.63
AC055720.1-201ENST00000539552 PLA2R1Q13018 1463 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 EXOC5O00471 708 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 USP17L7P0C7H9 530 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 RLBP1P12271 317 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 GDNFP39905 211 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 GRIA4P48058 902 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 LINC00310P59036 64 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 PAK2Q13177 524 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 FERMT3Q86UX7 667 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 FAM9BQ8IZU0 186 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 CCDC74AQ96AQ1 378 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 SRPK1Q96SB4 655 aaKnown RBP4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 CARS2Q9HA77 564 aaKnown RBP4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 JADE2Q9NQC1 790 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 EID1Q9Y6B2 187 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 U3KQE9 123 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 ADGBQ8N7X0 1667 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 ROBO1Q9Y6N7 1651 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 SHANK3Q9BYB0 1731 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 POGZQ7Z3K3 1410 aa4.89□□□□□ -1.63
AC055720.1-201ENST00000539552 ABCA8O94911 1581 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 CCDC189A1A4V9 331 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 ETV2O00321 342 aaPredicted RBP4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 KIF3BO15066 747 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 PLIN1O60240 522 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 KRT1P04264 644 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 POLR3DP05423 398 aaPredicted RBP4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 CTSHP09668 335 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 MED14OSP0DP75 135 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 GSTT1P30711 240 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 OS9Q13438 667 aaPredicted RBP4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 SAFB2Q14151 953 aaKnown RBP eCLIP4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 NFIXQ14938 502 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 MAP9Q49MG5 647 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 LRP10Q7Z4F1 713 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 KIAA0825Q8IV33 1275 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 AMOTL1Q8IY63 956 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 ABHD4Q8TB40 342 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 IL17RAQ96F46 866 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 SEC16BQ96JE7 1060 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms