RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PRR12Q9ULL5 1215 aa18.48■□□□□ 0.55
RPAIN-206ENST00000539417 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
RPAIN-206ENST00000539417 BRCA2P51587 3418 aa18.47■□□□□ 0.55
RPAIN-206ENST00000539417 ERCC3P19447 782 aa18.47■□□□□ 0.55
RPAIN-206ENST00000539417 CCDC178Q5BJE1 867 aa18.47■□□□□ 0.55
RPAIN-206ENST00000539417 TMEM67Q5HYA8 995 aa18.47■□□□□ 0.55
RPAIN-206ENST00000539417 RNF20Q5VTR2 975 aa18.47■□□□□ 0.55
RPAIN-206ENST00000539417 MB21D1Q8N884 522 aa18.47■□□□□ 0.55
RPAIN-206ENST00000539417 LY9Q9HBG7 655 aa18.47■□□□□ 0.55
RPAIN-206ENST00000539417 RAVER2Q9HCJ3 691 aaKnown RBP18.47■□□□□ 0.55
RPAIN-206ENST00000539417 ZNF536O15090 1300 aa18.47■□□□□ 0.55
RPAIN-206ENST00000539417 GNRH1P01148 92 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 MAPK4P31152 587 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 IKQ13123 557 aaPredicted RBP18.46■□□□□ 0.55
RPAIN-206ENST00000539417 WTAPQ15007 396 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 WDR78Q5VTH9 848 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 BTNL9Q6UXG8 535 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 PLEKHH3Q7Z736 793 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 CPXCR1Q8N123 301 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 STAG2Q8N3U4 1231 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 SH3TC2Q8TF17 1288 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 NEK1Q96PY6 1258 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 UBA5Q9GZZ9 404 aa18.46■□□□□ 0.55
RPAIN-206ENST00000539417 SH2B2O14492 632 aaPredicted RBP18.46■□□□□ 0.54
RPAIN-206ENST00000539417 PLA2G6O60733 806 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 MCM5P33992 734 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 STAT3P40763 770 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 SLC4A3P48751 1232 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 ARHGEF6Q15052 776 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 MORN1Q5T089 497 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 FAM160B2Q86V87 743 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 NCAPG2Q86XI2 1143 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 CHURC1Q8WUH1 139 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 USP6NLQ92738 828 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 COA7Q96BR5 231 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 MYL10Q9BUA6 226 aa18.46■□□□□ 0.54
RPAIN-206ENST00000539417 ELNP15502 786 aa18.45■□□□□ 0.54
RPAIN-206ENST00000539417 PTPREP23469 700 aa18.45■□□□□ 0.54
RPAIN-206ENST00000539417 HOXD10P28358 340 aa18.45■□□□□ 0.54
RPAIN-206ENST00000539417 CCNA1P78396 465 aa18.45■□□□□ 0.54
RPAIN-206ENST00000539417 EXOSC10Q01780 885 aaKnown RBP18.45■□□□□ 0.54
RPAIN-206ENST00000539417 SLC35G1Q2M3R5 365 aa18.45■□□□□ 0.54
RPAIN-206ENST00000539417 SYDE2Q5VT97 1194 aa18.45■□□□□ 0.54
RPAIN-206ENST00000539417 CCDC174Q6PII3 467 aa18.45■□□□□ 0.54
RPAIN-206ENST00000539417 RIOX2Q8IUF8 465 aa18.45■□□□□ 0.54
RPAIN-206ENST00000539417 AGBL1Q96MI9 1066 aa18.45■□□□□ 0.54
RPAIN-206ENST00000539417 SMCHD1A6NHR9 2005 aa18.44■□□□□ 0.54
RPAIN-206ENST00000539417 ZBED4O75132 1171 aa18.44■□□□□ 0.54
RPAIN-206ENST00000539417 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
RPAIN-206ENST00000539417 CYP2B6P20813 491 aa18.44■□□□□ 0.54
RPAIN-206ENST00000539417 C8orf34Q49A92 452 aa18.44■□□□□ 0.54
RPAIN-206ENST00000539417 SNRNP48Q6IEG0 339 aaKnown RBP18.44■□□□□ 0.54
RPAIN-206ENST00000539417 RAB11FIP4Q86YS3 637 aa18.44■□□□□ 0.54
RPAIN-206ENST00000539417 CCAR1Q8IX12 1150 aaKnown RBP18.44■□□□□ 0.54
RPAIN-206ENST00000539417 SHCBP1Q8NEM2 672 aa18.44■□□□□ 0.54
RPAIN-206ENST00000539417 RAET1EQ8TD07 263 aa18.44■□□□□ 0.54
RPAIN-206ENST00000539417 JAKMIP1Q96N16 626 aaKnown RBP18.44■□□□□ 0.54
RPAIN-206ENST00000539417 MYCP01106 439 aaPredicted RBP18.43■□□□□ 0.54
RPAIN-206ENST00000539417 PRMT2P55345 433 aa18.43■□□□□ 0.54
RPAIN-206ENST00000539417 TROAPQ12815 778 aa18.43■□□□□ 0.54
RPAIN-206ENST00000539417 RANBP17Q9H2T7 1088 aaKnown RBP18.43■□□□□ 0.54
RPAIN-206ENST00000539417 MAD2L2Q9UI95 211 aa18.43■□□□□ 0.54
RPAIN-206ENST00000539417 ERICH2A1L162 156 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 ATP2A1O14983 1001 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 ADCY3O60266 1144 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 RXRAP19793 462 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 TRIM32Q13049 653 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 IRF5Q13568 498 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 GRB14Q14449 540 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 SART3Q15020 963 aaKnown RBP18.42■□□□□ 0.54
RPAIN-206ENST00000539417 CCL14Q16627 93 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 DHX32Q7L7V1 743 aaKnown RBP18.42■□□□□ 0.54
RPAIN-206ENST00000539417 NBPF11Q86T75 865 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 NPLOC4Q8TAT6 608 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 TMEM87BQ96K49 555 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 TEX13BQ9BXU2 312 aa18.42■□□□□ 0.54
RPAIN-206ENST00000539417 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
RPAIN-206ENST00000539417 COBLO75128 1261 aa18.41■□□□□ 0.54
RPAIN-206ENST00000539417 CAPN15O75808 1086 aa18.41■□□□□ 0.54
RPAIN-206ENST00000539417 PARP1P09874 1014 aaKnown RBP18.41■□□□□ 0.54
RPAIN-206ENST00000539417 KRT32Q14532 448 aa18.41■□□□□ 0.54
RPAIN-206ENST00000539417 GRM4Q14833 912 aa18.41■□□□□ 0.54
RPAIN-206ENST00000539417 SLC9C1Q4G0N8 1177 aa18.41■□□□□ 0.54
RPAIN-206ENST00000539417 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
RPAIN-206ENST00000539417 ZNF654Q8IZM8 581 aa18.41■□□□□ 0.54
RPAIN-206ENST00000539417 NUDT12Q9BQG2 462 aa18.41■□□□□ 0.54
RPAIN-206ENST00000539417 CWC22Q9HCG8 908 aaKnown RBP18.41■□□□□ 0.54
RPAIN-206ENST00000539417 HOMER2Q9NSB8 354 aa18.41■□□□□ 0.54
RPAIN-206ENST00000539417 FLRT1Q9NZU1 646 aa18.41■□□□□ 0.54
RPAIN-206ENST00000539417 SLC15A5A6NIM6 579 aa18.4■□□□□ 0.54
RPAIN-206ENST00000539417 CCDC85CA6NKD9 419 aa18.4■□□□□ 0.54
RPAIN-206ENST00000539417 EPB41L2O43491 1005 aaKnown RBP18.4■□□□□ 0.54
RPAIN-206ENST00000539417 SLC25A27O95847 323 aa18.4■□□□□ 0.54
RPAIN-206ENST00000539417 ADORA2AP29274 412 aa18.4■□□□□ 0.54
RPAIN-206ENST00000539417 GRK4P32298 578 aa18.4■□□□□ 0.54
RPAIN-206ENST00000539417 MAP2K5Q13163 448 aa18.4■□□□□ 0.54
RPAIN-206ENST00000539417 ASPRV1Q53RT3 343 aa18.4■□□□□ 0.54
RPAIN-206ENST00000539417 ADGRF4Q8IZF3 695 aa18.4■□□□□ 0.54
RPAIN-206ENST00000539417 TRIB2Q92519 343 aa18.4■□□□□ 0.54
RPAIN-206ENST00000539417 ARMC5Q96C12 935 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms