RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TTLL1O95922 423 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 CAP2P40123 477 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 SEPT2Q15019 361 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 NPY5RQ15761 445 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 PFKFB3Q16875 520 aaPredicted RBP10.16□□□□□ -0.78
DDB1-213ENST00000539332 SUPT20HL1Q3ZLR7 823 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 PPP4R3BQ5MIZ7 849 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 DCAF15Q66K64 600 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 DLK2Q6UY11 383 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 CCDC82Q8N4S0 544 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 MYRIPQ8NFW9 859 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 LZTS2Q9BRK4 669 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 SPZ1Q9BXG8 430 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 KANSL2Q9H9L4 492 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 RRAGCQ9HB90 399 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 MORC2Q9Y6X9 1032 aaPredicted RBP10.16□□□□□ -0.78
DDB1-213ENST00000539332 POTEIP0CG38 1075 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 POTEJP0CG39 1038 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 SCG2P13521 617 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 AKAP17AQ02040 695 aaKnown RBP10.16□□□□□ -0.78
DDB1-213ENST00000539332 STAG2Q8N3U4 1231 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 LINC00301Q8NCQ3 95 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 TNFRSF25Q93038 417 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 FTOQ9C0B1 505 aaKnown RBP eCLIP10.16□□□□□ -0.78
DDB1-213ENST00000539332 CABP5Q9NP86 173 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 SH3GLB2Q9NR46 395 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 ZBTB21Q9ULJ3 1066 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 V9GY48 417 aaPredicted RBP10.16□□□□□ -0.78
DDB1-213ENST00000539332 OTOFQ9HC10 1997 aa10.16□□□□□ -0.78
DDB1-213ENST00000539332 CYTH3O43739 400 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 ASNSP08243 561 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 EEF2P13639 858 aaKnown RBP10.15□□□□□ -0.78
DDB1-213ENST00000539332 XBP1P17861 261 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 GTF2F1P35269 517 aaKnown RBP eCLIP10.15□□□□□ -0.78
DDB1-213ENST00000539332 ICA1Q05084 483 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 CCDC183Q5T5S1 534 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 SIAH1Q8IUQ4 282 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 NOSTRINQ8IVI9 506 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 DIS3L2Q8IYB7 885 aaKnown RBP10.15□□□□□ -0.78
DDB1-213ENST00000539332 LRRC47Q8N1G4 583 aaKnown RBP10.15□□□□□ -0.78
DDB1-213ENST00000539332 ZNF341Q9BYN7 854 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 GTPBP4Q9BZE4 634 aaKnown RBP10.15□□□□□ -0.78
DDB1-213ENST00000539332 NMRK2Q9NPI5 230 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 NYAP2Q9P242 653 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 CLIP2Q9UDT6 1046 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 ZNF112Q9UJU3 913 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 PAPPA2Q9BXP8 1791 aa10.15□□□□□ -0.78
DDB1-213ENST00000539332 CTNND1O60716 968 aaKnown RBP10.14□□□□□ -0.79
DDB1-213ENST00000539332 PTMAP06454 111 aaKnown RBP10.14□□□□□ -0.79
DDB1-213ENST00000539332 PDHBP11177 359 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 ATP2B2Q01814 1243 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 SAFBQ15424 915 aaKnown RBP eCLIP10.14□□□□□ -0.79
DDB1-213ENST00000539332 ANO1Q5XXA6 986 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 KCNG4Q8TDN1 519 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 ZNF526Q8TF50 670 aaPredicted RBP10.14□□□□□ -0.79
DDB1-213ENST00000539332 MKL1Q969V6 931 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 GLIS2Q9BZE0 524 aaPredicted RBP10.14□□□□□ -0.79
DDB1-213ENST00000539332 TSPY26PQ9H489 355 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 KCNJ14Q9UNX9 436 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 FZD1Q9UP38 647 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 CLEC11AQ9Y240 323 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 PHIPQ8WWQ0 1821 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 A0A1W2PQ27 194 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 A0A1W2PQ64 194 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 A0A1W2PQD8 194 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 BTBD18B2RXH4 712 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 LETM1O95202 739 aaPredicted RBP10.14□□□□□ -0.79
DDB1-213ENST00000539332 TPM3P06753 285 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 PARP1P09874 1014 aaKnown RBP10.14□□□□□ -0.79
DDB1-213ENST00000539332 INPP5BP32019 993 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 DMTNQ08495 405 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 PTPAQ15257 358 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 ASPRV1Q53RT3 343 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 RASGRP2Q7LDG7 609 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 PIAS4Q8N2W9 510 aaPredicted RBP10.14□□□□□ -0.79
DDB1-213ENST00000539332 KLRG1Q96E93 195 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 CDCA5Q96FF9 252 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 WRNIP1Q96S55 665 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 RIOX1Q9H6W3 641 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 VPS54Q9P1Q0 977 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.14□□□□□ -0.79
DDB1-213ENST00000539332 SYNPO2Q9UMS6 1093 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 CLIC4Q9Y696 253 aa10.14□□□□□ -0.79
DDB1-213ENST00000539332 PARP14Q460N5 1801 aa10.13□□□□□ -0.79
DDB1-213ENST00000539332 PPP1R12BO60237 982 aaPredicted RBP10.13□□□□□ -0.79
DDB1-213ENST00000539332 PPP6R2O75170 966 aa10.13□□□□□ -0.79
DDB1-213ENST00000539332 LIG1P18858 919 aa10.13□□□□□ -0.79
DDB1-213ENST00000539332 SLC39A14Q15043 492 aa10.13□□□□□ -0.79
DDB1-213ENST00000539332 MAP1SQ66K74 1059 aaPredicted RBP10.13□□□□□ -0.79
DDB1-213ENST00000539332 ADALQ6DHV7 355 aa10.13□□□□□ -0.79
DDB1-213ENST00000539332 RBM43Q6ZSC3 357 aaKnown RBP10.13□□□□□ -0.79
DDB1-213ENST00000539332 DAGLBQ8NCG7 672 aa10.13□□□□□ -0.79
DDB1-213ENST00000539332 OXER1Q8TDS5 423 aa10.13□□□□□ -0.79
DDB1-213ENST00000539332 ZNF592Q92610 1267 aa10.13□□□□□ -0.79
DDB1-213ENST00000539332 ZKSCAN4Q969J2 545 aaPredicted RBP10.13□□□□□ -0.79
DDB1-213ENST00000539332 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.13□□□□□ -0.79
DDB1-213ENST00000539332 GINM1Q9NU53 330 aa10.13□□□□□ -0.79
DDB1-213ENST00000539332 MYH7BA7E2Y1 1941 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 hCG_1642624A0A1W2PR95 340 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 A0A1W2PRG0 241 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms