RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.6□□□□□ -1.03
LMO3-220ENST00000539232 NYAP2Q9P242 653 aa8.6□□□□□ -1.03
LMO3-220ENST00000539232 ANAPC4Q9UJX5 808 aa8.6□□□□□ -1.03
LMO3-220ENST00000539232 MYO9BQ13459 2157 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 COBLO75128 1261 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 CHMLP26374 656 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 FOXK2Q01167 660 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 RRP12Q5JTH9 1297 aaKnown RBP8.59□□□□□ -1.03
LMO3-220ENST00000539232 AMOTL1Q8IY63 956 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 ZNF444Q8N0Y2 327 aaPredicted RBP8.59□□□□□ -1.03
LMO3-220ENST00000539232 TRPV1Q8NER1 839 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 NPLOC4Q8TAT6 608 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 MKL1Q969V6 931 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 ADAMTS5Q9UNA0 930 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 RABGAP1Q9Y3P9 1069 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 RIPK3Q9Y572 518 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 DOCK1Q14185 1865 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 PHIPQ8WWQ0 1821 aa8.59□□□□□ -1.03
LMO3-220ENST00000539232 TCF20Q9UGU0 1960 aaKnown RBP8.59□□□□□ -1.03
LMO3-220ENST00000539232 PFASO15067 1338 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 ORC4O43929 436 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 RANBP6O60518 1105 aaKnown RBP8.58□□□□□ -1.04
LMO3-220ENST00000539232 IGHA2P01877 340 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 ERCC3P19447 782 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 MCCP23508 829 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 LRRFIP1Q32MZ4 808 aaKnown RBP8.58□□□□□ -1.04
LMO3-220ENST00000539232 WDR78Q5VTH9 848 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 TTBK2Q6IQ55 1244 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 RCSD1Q6JBY9 416 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 PLEKHH3Q7Z736 793 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 LPAR1Q92633 364 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 COA7Q96BR5 231 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 ZKSCAN3Q9BRR0 538 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 SPATC1LQ9H0A9 340 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 DIAPH3Q9NSV4 1193 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 MTMR7Q9Y216 660 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 DDX49Q9Y6V7 483 aaKnown RBP8.58□□□□□ -1.04
LMO3-220ENST00000539232 DOCK3Q8IZD9 2030 aa8.58□□□□□ -1.04
LMO3-220ENST00000539232 ZDBF2Q9HCK1 2354 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 VWA5AO00534 786 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 WDR46O15213 610 aaKnown RBP8.57□□□□□ -1.04
LMO3-220ENST00000539232 GPR37L1O60883 481 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 TTLL1O95922 423 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 PGK2P07205 417 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 TSPY3P0CV98 308 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 TSPY8P0CW00 308 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 PTPREP23469 700 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 CCND3P30281 292 aaPredicted RBP8.57□□□□□ -1.04
LMO3-220ENST00000539232 MAPK4P31152 587 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 NOVP48745 357 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 PLS1Q14651 629 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 SLFN13Q68D06 897 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 KCTD1Q719H9 257 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 CPVLQ9H3G5 476 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 EPHX3Q9H6B9 360 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 SENP2Q9HC62 589 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 RAVER2Q9HCJ3 691 aaKnown RBP8.57□□□□□ -1.04
LMO3-220ENST00000539232 PPP4R2Q9NY27 417 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 HOXC10Q9NYD6 342 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 ZNF214Q9UL59 606 aaPredicted RBP8.57□□□□□ -1.04
LMO3-220ENST00000539232 OGDHLQ9ULD0 1010 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 PPP1R9AQ9ULJ8 1098 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 PLIN4Q96Q06 1357 aa8.57□□□□□ -1.04
LMO3-220ENST00000539232 CDK5RAP2Q96SN8 1893 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 TSPY2A6NKD2 308 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 PRKAR2AP13861 404 aaKnown RBP8.56□□□□□ -1.04
LMO3-220ENST00000539232 ADORA2AP29274 412 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 CYP2C19P33261 490 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 SLC16A2P36021 539 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 PDE4BQ07343 736 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 CACNB2Q08289 660 aaPredicted RBP8.56□□□□□ -1.04
LMO3-220ENST00000539232 MAP2K5Q13163 448 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 GRB14Q14449 540 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 GRIN2CQ14957 1233 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 SHHQ15465 462 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 PRAMEF19Q5SWL8 479 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 AKNAD1Q5T1N1 836 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 MAP3K21Q5TCX8 1036 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 STOX1Q6ZVD7 989 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 STAG1Q8WVM7 1258 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 KIFC2Q96AC6 838 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 SLF1Q9BQI6 1058 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 TMEM47Q9BQJ4 181 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 GOPCQ9HD26 462 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 GPHNQ9NQX3 736 aaPredicted RBP8.56□□□□□ -1.04
LMO3-220ENST00000539232 TOMM22Q9NS69 142 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 LOC285556D6RIA3 1793 aa8.56□□□□□ -1.04
LMO3-220ENST00000539232 ZNF536O15090 1300 aa8.55□□□□□ -1.04
LMO3-220ENST00000539232 FRMPD2Q68DX3 1309 aaPredicted RBP8.55□□□□□ -1.04
LMO3-220ENST00000539232 FOCADQ5VW36 1801 aa8.55□□□□□ -1.04
LMO3-220ENST00000539232 AK9Q5TCS8 1911 aa8.55□□□□□ -1.04
LMO3-220ENST00000539232 SLC15A5A6NIM6 579 aa8.55□□□□□ -1.04
LMO3-220ENST00000539232 B4E1Z4 1266 aa8.55□□□□□ -1.04
LMO3-220ENST00000539232 TMEM232C9JQI7 657 aa8.55□□□□□ -1.04
LMO3-220ENST00000539232 SGSM2O43147 1006 aa8.55□□□□□ -1.04
LMO3-220ENST00000539232 KDM4AO75164 1064 aa8.55□□□□□ -1.04
LMO3-220ENST00000539232 HMGCRP04035 888 aa8.55□□□□□ -1.04
LMO3-220ENST00000539232 COL6A1P12109 1028 aa8.55□□□□□ -1.04
LMO3-220ENST00000539232 PTGS1P23219 599 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms