RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 RASAL3Q86YV0 1011 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 TEX2Q8IWB9 1127 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 SPICE1Q8N0Z3 855 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 MB21D1Q8N884 522 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 FAM184AQ8NB25 1140 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 CCDC12Q8WUD4 166 aaPredicted RBP11.85□□□□□ -0.51
CLPB-210ENST00000539148 SLF1Q9BQI6 1058 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 RNF26Q9BY78 433 aaPredicted RBP11.85□□□□□ -0.51
CLPB-210ENST00000539148 RPAP3Q9H6T3 665 aaPredicted RBP11.85□□□□□ -0.51
CLPB-210ENST00000539148 GPHNQ9NQX3 736 aaPredicted RBP11.85□□□□□ -0.51
CLPB-210ENST00000539148 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 PARP14Q460N5 1801 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 GOLGA6L22H0YM25 854 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 COPB2P35606 906 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 MAP2K2P36507 400 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 GCLCP48506 637 aaPredicted RBP11.84□□□□□ -0.51
CLPB-210ENST00000539148 CCT2P78371 535 aaKnown RBP11.84□□□□□ -0.51
CLPB-210ENST00000539148 TRIM29Q14134 588 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 SHROOM1Q2M3G4 852 aaPredicted RBP11.84□□□□□ -0.51
CLPB-210ENST00000539148 SKOR2Q2VWA4 1001 aaPredicted RBP11.84□□□□□ -0.51
CLPB-210ENST00000539148 BTNL9Q6UXG8 535 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 TMTC3Q6ZXV5 915 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 CCDC84Q86UT8 332 aaPredicted RBP11.84□□□□□ -0.51
CLPB-210ENST00000539148 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 PARK7Q99497 189 aaKnown RBP11.84□□□□□ -0.51
CLPB-210ENST00000539148 MYL10Q9BUA6 226 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 MAD2L2Q9UI95 211 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 SMC3Q9UQE7 1217 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 STK36Q9NRP7 1315 aa11.84□□□□□ -0.51
CLPB-210ENST00000539148 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
CLPB-210ENST00000539148 DEXIO95424 95 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 OAZ1P54368 228 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 SCRN1Q12765 414 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 CUL4AQ13619 759 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 CATSPERGQ6ZRH7 1159 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 KCTD1Q719H9 257 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 CCDC83Q8IWF9 413 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 JMYQ8N9B5 988 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 RGS22Q8NE09 1264 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 NKX2-3Q8TAU0 364 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 SMCR8Q8TEV9 937 aaPredicted RBP11.83□□□□□ -0.52
CLPB-210ENST00000539148 CAPNS2Q96L46 248 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 MAF1Q9H063 256 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 GLT8D2Q9H1C3 349 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 SENP2Q9HC62 589 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.83□□□□□ -0.52
CLPB-210ENST00000539148 HPS5Q9UPZ3 1129 aa11.83□□□□□ -0.52
CLPB-210ENST00000539148 FRMPD2Q68DX3 1309 aaPredicted RBP11.83□□□□□ -0.52
CLPB-210ENST00000539148 BAZ2BQ9UIF8 2168 aaKnown RBP11.82□□□□□ -0.52
CLPB-210ENST00000539148 PNMA6FA0A0J9YX94 578 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 PRPF3O43395 683 aaKnown RBP11.82□□□□□ -0.52
CLPB-210ENST00000539148 FMNL1O95466 1100 aaPredicted RBP11.82□□□□□ -0.52
CLPB-210ENST00000539148 GOLGA8HP0CJ92 632 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 RXRAP19793 462 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 ADD1P35611 737 aaKnown RBP11.82□□□□□ -0.52
CLPB-210ENST00000539148 DDIT3P35638 169 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 CCNA1P78396 465 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 GRM1Q13255 1194 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 CCDC148Q8NFR7 591 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 CNKSR2Q8WXI2 1034 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 KIFC2Q96AC6 838 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
CLPB-210ENST00000539148 RIOX1Q9H6W3 641 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 PPP1R9AQ9ULJ8 1098 aa11.82□□□□□ -0.52
CLPB-210ENST00000539148 PDHXO00330 501 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 ZBTB5O15062 677 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 DSG3P32926 999 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 TM4SF4P48230 202 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 TKFCQ3LXA3 575 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 MCTP2Q6DN12 878 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 LBX2Q6XYB7 198 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 CCAR1Q8IX12 1150 aaKnown RBP11.81□□□□□ -0.52
CLPB-210ENST00000539148 ADGRF4Q8IZF3 695 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 SAMD3Q8N6K7 520 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 NECAB1Q8N987 351 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 BEGAINQ9BUH8 593 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 AMNQ9BXJ7 453 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 SLC26A6Q9BXS9 759 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 ZFYVE28Q9HCC9 887 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 NCOA5Q9HCD5 579 aaKnown RBP11.81□□□□□ -0.52
CLPB-210ENST00000539148 VAT1LQ9HCJ6 419 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 BRMS1Q9HCU9 246 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 SH3GLB2Q9NR46 395 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 ORC3Q9UBD5 711 aaPredicted RBP11.81□□□□□ -0.52
CLPB-210ENST00000539148 PRR12Q9ULL5 1215 aa11.81□□□□□ -0.52
CLPB-210ENST00000539148 WDR33Q9C0J8 1336 aaKnown RBP11.81□□□□□ -0.52
CLPB-210ENST00000539148 COL11A1P12107 1806 aaPredicted RBP11.81□□□□□ -0.52
CLPB-210ENST00000539148 PTPDC1A2A3K4 754 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 CD2BP2O95400 341 aaKnown RBP11.8□□□□□ -0.52
CLPB-210ENST00000539148 SCG2P13521 617 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 CALML3P27482 149 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 CDC27P30260 824 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 GJA5P36382 358 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
CLPB-210ENST00000539148 COL9A3Q14050 684 aaPredicted RBP11.8□□□□□ -0.52
CLPB-210ENST00000539148 SAFBQ15424 915 aaKnown RBP eCLIP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms